CN189092

Overview
NameCN189092
Unique NameCN189092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.675e-29
Identity = 67/140 (47.86%), Postives = 90/140 (64.29%), Query Frame = 2
Query:   11 PFLVPR-AAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLW-EKPNEFYPERFI---GKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRLSPH 415
            P  +PR   R   +V GY IPKGT + V++WAIGR PS+W + PNEF PERF+      ID +G+ FEL+PFGAGRR+C G  +G+ +++  L  L+H F WKL    S +ELNM+E FGL+  +  PL  +  PRL  H
Sbjct:  375 PLNLPRNCIRGHVDVNGYYIPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKL--GFSEDELNMDETFGLALQKAVPLAAMVIPRLPLH 512          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.675e-29
Identity = 61/130 (46.92%), Postives = 81/130 (62.31%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHP 400
            P LVPR  RE+  + GY IP  T V+V+VWA+GR P  W+    F PERF   +ID  G++FE LPFG GRR+CPG S GL  +   L  LL+ F WKLP  M  ++L++ E  G++  RK  L ++A P
Sbjct:  368 PLLVPRECREETEINGYTIPVKTKVMVNVWALGRDPKYWDDAESFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAGITAARKGDLYLIATP 497          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.675e-29
Identity = 55/103 (53.40%), Postives = 70/103 (67.96%), Query Frame = 2
Query:    5 VAPFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPG 313
            VAP LVPR +  D  + GY IP  T V ++ WAIGR P  WE   EF PERF+  ++D KG DF+L+PFGAGRR CPG + G+  ++ SL NLL+ F W+LPG
Sbjct:  368 VAPLLVPRESTRDVVIRGYHIPAKTRVFINAWAIGRDPKSWENAEEFLPERFVNNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWELPG 470          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.133e-28
Identity = 56/119 (47.06%), Postives = 78/119 (65.55%), Query Frame = 2
Query:   17 LVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRK 373
            L+PR+ RE+C V GY IP    ++++VW++GR+P  WEKP  F+PERF   + D  G DFE +PFGAGRR+CPG + GL  ++  L  LL+ F WKL   M   +++M E  GL+  RK
Sbjct:  365 LIPRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGIRK 483          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.480e-28
Identity = 58/130 (44.62%), Postives = 81/130 (62.31%), Query Frame = 2
Query:   17 LVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRL 406
            ++P    E C V GY IPKG  V V+  AIGR P  W+ P +F PERF+   I+  G  F+ +PFG+GRR+CPG  L +++I   L +L+H F W+LP  + NE+L+MEE+F LS     PL V+   R+
Sbjct:  358 MIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIPKVRI 487          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.480e-28
Identity = 58/128 (45.31%), Postives = 85/128 (66.41%), Query Frame = 2
Query:    8 APFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVL 391
            AP L+PR       + GY+IP  T +LV+VW+IGR P  W+ P EF PERFI   ID KG+ FE+LPFG+GRR+CPG +  +  ++  L NLL+ F W+LP    +++L+MEE   ++  +K PL+++
Sbjct:  368 APLLLPRETMSQIKIQGYNIPSKTILLVNVWSIGRDPKHWKNPEEFNPERFIDCPIDYKGNSFEMLPFGSGRRICPGIAFAIATVELGLLNLLYHFDWRLP--EEDKDLDMEEAGDVTIIKKVPLKLV 493          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.933e-28
Identity = 58/119 (48.74%), Postives = 76/119 (63.87%), Query Frame = 2
Query:   17 LVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRK 373
            L+PR      N+ GY+IP  T V+++ WAIGR P  W   + F PERF   +ID KG+ FE +PFGAGRRMCPG + GL  I   L  LL+ F W+LP  M  E+L+M+E FG++  RK
Sbjct:  373 LIPRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFGMTVARK 491          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.623e-28
Identity = 54/115 (46.96%), Postives = 78/115 (67.83%), Query Frame = 2
Query:   17 LVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLS 361
            L+PR+ RE+C V GY IP    ++++VW++GR+P  WEKP+ F+PERF   + D  G+DFE +PFGAGRR+CPG + GL  ++  L  LL+ F WKL   M   +++M E  GL+
Sbjct:  366 LIPRSCREECVVNGYTIPNKARIMINVWSMGRNPLYWEKPDTFWPERFDQVSKDFMGNDFEFVPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLT 480          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.344e-28
Identity = 64/138 (46.38%), Postives = 88/138 (63.77%), Query Frame = 2
Query:    8 APFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGK--AIDV--KGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRLS 409
            APFL+P  +  D  + GY +P GT VLV  WA+GR  + WEKP EF PERF+ +  A+DV  KG D   +PFG+GRR+CPG + G   ++  L NL++ F W++PG  S   ++MEE FGL+  RK  L  L  PR++
Sbjct:  402 APFLLPHYSTADSEIDGYFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPG--SGAGVSMEESFGLTLRRKEKL--LLVPRIA 535          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 9.591e-28
Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = 2
Query:   11 PF-LVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRK 373
            PF L+PR +RE+C + G+ IP  T +L++ W+IGR P  WE P+ F PERF   + D  G+DFE +PFGAG+R+CPG   GL  ++  L  LL+ F WKLP  M++ +L +    GLS PRK
Sbjct:  360 PFPLIPRQSREECEINGFYIPARTRILINAWSIGRDPLYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLYVAGTPGLSGPRK 481          
The following BLAST results are available for this feature:
BLAST of CN189092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
C75A4_GENTR8.675e-2947.86Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71D7_SOLCH8.675e-2946.92Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71A1_PERAE8.675e-2953.40Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C7D95_MENSP1.133e-2847.06Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C80A1_BERST1.480e-2844.62Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71BO_ARATH1.480e-2845.31Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71D8_SOYBN1.933e-2848.74Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71DF_MENPI5.623e-2846.96Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71C2_MAIZE7.344e-2846.38Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C7D94_MENGR9.591e-2847.54Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189092 ID=CN189092; Name=CN189092; organism=Citrus sinensis; type=EST; length=598bp
GAGGGTGGCTCCTTTCCTAGTGCCCCGAGCGGCTAGAGAAGATTGCAACG
TAGCCGGCTACGACATCCCAAAAGGCACTCCAGTCCTTGTTAGTGTATGG
GCGATTGGGAGACACCCAAGTTTGTGGGAAAAGCCAAATGAATTTTATCC
TGAGAGATTTATTGGAAAAGCAATTGATGTGAAAGGGCATGATTTTGAGC
TGCTGCCATTTGGGGCTGGGAGAAGAATGTGTCCAGGGTACAGTCTCGGC
CTTAAGGTTATTCAAGCAAGCTTAACTAATCTTTTGCATGGATTTGCATG
GAAATTGCCAGGAAATATGAGCAACGAGGAGCTGAATATGGAGGAAATTT
TTGGGCTTTCTACCCCGAGAAAGTTTCCACTTGAGGTTCTGGCTCACCCA
AGGCTTTCGCCCCATCTTTACAATCTGTGATTGTGGCTTCCAAAATAATT
AATTACGGCGTAGCGTACTTTTGAGTAAGTGGTTTGTTAGTGCGAAAAGG
CCATGGATTTGCACATGTAATGAGATTTTAAACCCAAACTAACGTGCGCT
GCTGTTTGGCCCCAAATAACGCGTCATCTTTTGATATATAATCTTTTT
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