CN189078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189078 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 7.766e-27 Identity = 65/150 (43.33%), Postives = 92/150 (61.33%), Query Frame = -1 Query: 348 MASKRINKELKDLQKDPPAS*SAGPV--ADDMF-HWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 785 +A +RI +E K++ K S + V D+ F + I GP D+P+ GG + + I P YPF PPKV F TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 4 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CN189078 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.766e-27 Identity = 69/157 (43.95%), Postives = 94/157 (59.87%), Query Frame = -1 Query: 348 SKRINKELKDLQKDPPAS*S------AGPVADDMFHWQ---ATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 779 S R+ KELK L DPP S A + D + A I GP D+ +A G+F + I P YPF+PP V+F T ++HPNI+++G ICLDIL K W P+L IS VL S+ LL++PNPDD L+ E++ YK +R ++ AR T+KYA Sbjct: 8 SLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164
BLAST of CN189078 vs. ExPASy Swiss-Prot
Match: UBCD4_DROME (Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster GN=UbcD4 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.951e-26 Identity = 63/152 (41.45%), Postives = 88/152 (57.89%), Query Frame = -1 Query: 342 MASKRINKELKDLQKDPP---AS*SAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 785 MA RI +E K++ + S V D + I GP D+P+ GG F++ I P YPF PPKV F T+++HPNI+S G+ICLDILK+ W+ A+T+ VLLS+ +LL PDDP +A+ +K + TA+ WT YA G Sbjct: 4 MAVSRIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQFKDKYDLFLLTAKHWTNAYAGG 155
BLAST of CN189078 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.575e-26 Identity = 56/146 (38.36%), Postives = 91/146 (62.33%), Query Frame = -1 Query: 351 ASKRINKELKDLQKDPPAS*SAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 782 AS+R+ KEL++++K + V + ++ WQ I+ P + P+ G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CN189078 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.575e-26 Identity = 56/146 (38.36%), Postives = 91/146 (62.33%), Query Frame = -1 Query: 351 ASKRINKELKDLQKDPPAS*SAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 782 AS+R+ KEL++++K + V + ++ WQ I+ P + P+ G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CN189078 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.575e-26 Identity = 56/146 (38.36%), Postives = 91/146 (62.33%), Query Frame = -1 Query: 351 ASKRINKELKDLQKDPPAS*SAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 782 AS+R+ KEL++++K + V + ++ WQ I+ P + P+ G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CN189078 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.587e-26 Identity = 56/146 (38.36%), Postives = 91/146 (62.33%), Query Frame = -1 Query: 351 ASKRINKELKDLQKDPPAS*SAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 782 AS+R+ KEL++++K + V + ++ WQ I+ P + P+ G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIRVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CN189078 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.465e-25 Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = -1 Query: 342 KRINKELKDLQK-DPPAS*SAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DRAKYETTARSWTQKYAMG 776 KR++KE Q D PV D DMFHW+A I GP+++P+ GG +++ IH YP PP V F+TK+ HPNI+ +NG +C+DILK WSPA ++ L+I SLL++ + PL + A + +T D+ Y + R T YA G Sbjct: 6 KRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKG 154
BLAST of CN189078 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.913e-25 Identity = 60/151 (39.74%), Postives = 92/151 (60.93%), Query Frame = -1 Query: 333 RINKELKDLQKDPPAS*SAGPVADD--MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DRAKYETTARSWTQKYAMG*EG 773 R+ KE K++Q++ A + DD +F W A I GPS++P+ GGVF ++ P YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL + ++ ++ D + + A+ +T+ AM +G Sbjct: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
BLAST of CN189078 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.913e-25 Identity = 57/133 (42.86%), Postives = 82/133 (61.65%), Query Frame = -1 Query: 384 SKRINKELKDLQKDPPAS*SAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY 779 +KR+ EL L S SA PV D D+ +W I GP D+P++G F VS+ FP +YPF PP + F + ++HPN++ +G+ICLDILKE+WS + +LLS+ SLL +PN PL A ++ D +Y Sbjct: 10 TKRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEY 142 The following BLAST results are available for this feature:
BLAST of CN189078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189078 ID=CN189078; Name=CN189078; organism=Citrus sinensis; type=EST; length=785bpback to top |