CN189078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189078 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.057e-12 Identity = 35/116 (30.17%), Postives = 57/116 (49.14%), Query Frame = -1 Query: 384 WQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL--------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY 689 W DS +AG + + FP YP +PP + F +K+FHPNI +G +C+ IL K++W+P I +++SI +L PN P + + MY+ + +Y Sbjct: 68 WDIYFTLGGDSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEY 183
BLAST of CN189078 vs. ExPASy Swiss-Prot
Match: UBC17_CAEEL (Probable ubiquitin-conjugating enzyme protein 17 OS=Caenorhabditis elegans GN=ubc-17 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.204e-11 Identity = 47/120 (39.17%), Postives = 66/120 (55.00%), Query Frame = -1 Query: 468 SKRINKELKDLQKDPP--AS*SAGPVADD--MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTK-----VFHPNINSNGSICLDIL-------KEQWSPALTISKVLLSI 779 +KRI KEL + P AS S D+ + + I GP D+P+A G+F I FP YPF PPK AF T F+PN+ ++G ICL IL +E+W+P ++ +VL+SI Sbjct: 411 TKRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCSLMQVLVSI 530
BLAST of CN189078 vs. ExPASy Swiss-Prot
Match: UBC12_CAEEL (NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.572e-11 Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = -1 Query: 351 PSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 668 P + + GG F I PP+Y PP V TKV+HPNIN +GSICL IL++ W P ++ V+ + SL D + +D L + A M+ +R + R + +Y Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179
BLAST of CN189078 vs. ExPASy Swiss-Prot
Match: UBC6_DEBHA (Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii GN=UBC6 PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 36/113 (31.86%), Postives = 59/113 (52.21%), Query Frame = -1 Query: 453 ASKRINKELKDLQKDPPAS*SAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 782 + KR+ KE K + +PP SA P +++ W I GP +PF G + + FP +YPFKPP ++ T + N +CL D + W+PA +++ +L + S +T Sbjct: 6 SQKRLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKPPSISMITP--NGRFACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFMT 116 The following BLAST results are available for this feature:
BLAST of CN189078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189078 ID=CN189078; Name=CN189078; organism=Citrus sinensis; type=EST; length=785bpback to top |