CN189072

Overview
NameCN189072
Unique NameCN189072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189072 vs. ExPASy Swiss-Prot
Match: UFOG_PETHY (Anthocyanidin 3-O-glucosyltransferase OS=Petunia hybrida GN=RT PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.210e-20
Identity = 62/198 (31.31%), Postives = 105/198 (53.03%), Query Frame = -2
Query:   36 ILLDTFYELEKEIIDYMAKIC--PIKPVGPLFKNPKAPTLTVRDDCMKPDECIDWLDKKPPSSVVYISFGTVVYLKQEQVEEIGYALLNSGISFLWVMKPPPE-DSGVKIVD-LPDGFLEKVGDKGKVVQ-WSPQEKVLAHPSVACFVTHCGWNSTMESLASGVPVITFPQWGDQVTDAMYLCDVFKTGLRLCRGEAE 614
            IL  T  ++E   I Y+      P+  +GP+  +P +  L         ++   WL+K    +V+Y SFG+  +L  +QV+E+   L  +G+ F  V+  P   D   ++   LP+GFLE+V DKG +   W  Q+ +LAH SV C+V H G++S +E+L +   V+  PQ GDQ+ +A  +    + G+ + R + +
Sbjct:  220 ILAKTCSQMEGPYIKYVEAQFNKPVFLIGPVVPDPPSGKLE--------EKWATWLNKFEGGTVIYCSFGSETFLTDDQVKELALGLEQTGLPFFLVLNFPANVDVSAELNRALPEGFLERVKDKGIIHSGWVQQQNILAHSSVGCYVCHAGFSSVIEALVNDCQVVMLPQKGDQILNAKLVSGDMEAGVEINRRDED 409          
BLAST of CN189072 vs. ExPASy Swiss-Prot
Match: UFOG4_MANES (Anthocyanidin 3-O-glucosyltransferase 4 (Fragment) OS=Manihot esculenta GN=GT4 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 45/139 (32.37%), Postives = 80/139 (57.55%), Query Frame = -2
Query:   60 ECIDWLDKKPPSSVVYISFGTVVYLKQEQVEEIGYALLNSGISFLWVMKPPPEDSGVKIVDLPDGFLEKVGDKGK--VVQWSPQEKVLAHPSVACFVTHCGWNSTMESLASGVPVITFPQWGDQVTDAMYLCDVFKTGL 470
            E + WLD   P SV+Y   G++  L   Q+ E+G  L ++   F+WV++   +  G++   L +G+ E+   +    +  WSPQ  +L+HP++  F THCGWNST+E +++GVP++  P + +Q  +   + +V   G+
Sbjct:   21 ELLKWLDLWEPGSVIYACLGSISGLTSWQLAELGLGLESTNQPFIWVIREGEKSEGLEKWILEEGYEERKRKREDFWIRGWSPQVLILSHPAIGAFFTHCGWNSTLEGISAGVPIVACPLFAEQFYNEKLVVEVLGIGV 159          
The following BLAST results are available for this feature:
BLAST of CN189072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
UFOG_PETHY1.210e-2031.31Anthocyanidin 3-O-glucosyltransferase OS=Petunia h... [more]
UFOG4_MANES6.005e-2032.37Anthocyanidin 3-O-glucosyltransferase 4 (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E10_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189072 ID=CN189072; Name=CN189072; organism=Citrus sinensis; type=EST; length=717bp
AGCCTTCTCCCTTCATCCCTTGAAATTATCCTGTTCTCTGCCTCTCCACG
GCACAATCTTAAACCGGTCTTGAACACATCACACAAATACATGGCATCAG
TTACTTGATCACCCCATTGCGGGAAGGTGATCACCGGCACCCCCGATGCC
AACGACTCCATGGTTGAGTTCCAGCCGCAGTGAGTCACAAAGCAAGCAAC
ACTAGGGTGAGCCAACACCTTTTCTTGTGGACTCCATTGCACAACTTTGC
CCTTATCTCCAACTTTCTCCAAGAACCCATCTGGCAGGTCAACAATTTTA
ACGCCAGAGTCTTCAGGCGGCGGCTTCATCACCCACAAGAACGAAATCCC
CGAGTTCAACAATGCATAGCCAATTTCTTCAACTTGTTCTTGCTTCAAGT
AGACAACCGTGCCGAAAGAGATGTACACAACGGATGATGGTGGCTTTTTG
TCGAGCCAGTCTATGCATTCATCGGGTTTCATGCAGTCATCGCGGACGGT
TAAGGTTGGAGCTTTAGGGTTTTTGAACAGAGGGCCGACGGGTTTAATAG
GGCAAATTTTTGCCATGTAATCGATAATCTCTTTCTCAAGCTCATAGAAA
GTGTCCAACAATATGCAAAACGGCTTGCCAAGATTTTCGTACTGCCCCAA
AATAGCTCTTCTCAAGAAAGGATAAGGAGTTGACGGATGCAAGAAGCTAG
GCATTTCATCATGCTTC
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