CN189069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: S61A1_RAT (Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus GN=Sec61a1 PE=2 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 3.740e-72 Identity = 116/176 (65.91%), Postives = 147/176 (83.52%), Query Frame = 2 Query: 155 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 + L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+++ YVM+GMYG S++GAG +LI +QL AG+IV+ LDELLQKGYGLGSG Sbjct: 4 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSG 178 HSP 2 Score: 55.0694 bits (131), Expect = 3.740e-72 Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLFIA NICE+I+WKAFSPTT+N+G G G Sbjct: 178 GISLFIATNICETIVWKAFSPTTVNTGRGMEFEG 211
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: S61A1_PONAB (Protein transport protein Sec61 subunit alpha isoform 1 OS=Pongo abelii GN=SEC61A1 PE=2 SV=3) HSP 1 Score: 238.424 bits (607), Expect = 3.740e-72 Identity = 116/176 (65.91%), Postives = 147/176 (83.52%), Query Frame = 2 Query: 155 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 + L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+++ YVM+GMYG S++GAG +LI +QL AG+IV+ LDELLQKGYGLGSG Sbjct: 4 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSG 178 HSP 2 Score: 55.0694 bits (131), Expect = 3.740e-72 Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLFIA NICE+I+WKAFSPTT+N+G G G Sbjct: 178 GISLFIATNICETIVWKAFSPTTVNTGRGMEFEG 211
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: S61A1_MOUSE (Protein transport protein Sec61 subunit alpha isoform 1 OS=Mus musculus GN=Sec61a1 PE=2 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 3.740e-72 Identity = 116/176 (65.91%), Postives = 147/176 (83.52%), Query Frame = 2 Query: 155 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 + L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+++ YVM+GMYG S++GAG +LI +QL AG+IV+ LDELLQKGYGLGSG Sbjct: 4 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSG 178 HSP 2 Score: 55.0694 bits (131), Expect = 3.740e-72 Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLFIA NICE+I+WKAFSPTT+N+G G G Sbjct: 178 GISLFIATNICETIVWKAFSPTTVNTGRGMEFEG 211
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: S61A1_HUMAN (Protein transport protein Sec61 subunit alpha isoform 1 OS=Homo sapiens GN=SEC61A1 PE=1 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 3.740e-72 Identity = 116/176 (65.91%), Postives = 147/176 (83.52%), Query Frame = 2 Query: 155 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 + L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+++ YVM+GMYG S++GAG +LI +QL AG+IV+ LDELLQKGYGLGSG Sbjct: 4 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSG 178 HSP 2 Score: 55.0694 bits (131), Expect = 3.740e-72 Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLFIA NICE+I+WKAFSPTT+N+G G G Sbjct: 178 GISLFIATNICETIVWKAFSPTTVNTGRGMEFEG 211
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: S61A1_CANFA (Protein transport protein Sec61 subunit alpha isoform 1 OS=Canis familiaris GN=SEC61A1 PE=1 SV=3) HSP 1 Score: 238.424 bits (607), Expect = 3.740e-72 Identity = 116/176 (65.91%), Postives = 147/176 (83.52%), Query Frame = 2 Query: 155 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 + L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+++ YVM+GMYG S++GAG +LI +QL AG+IV+ LDELLQKGYGLGSG Sbjct: 4 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSG 178 HSP 2 Score: 55.0694 bits (131), Expect = 3.740e-72 Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLFIA NICE+I+WKAFSPTT+N+G G G Sbjct: 178 GISLFIATNICETIVWKAFSPTTVNTGRGMEFEG 211
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_DEBHA (Protein transport protein SEC61 subunit alpha OS=Debaryomyces hansenii GN=SEC61 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 1.071e-65 Identity = 106/178 (59.55%), Postives = 144/178 (80.90%), Query Frame = 2 Query: 149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 GFRVL LV+PF PF+PEV + +RK+ F++++++T ++L IFLV S++PLYGI S+ G+DP YW+R++LASNRGT+MELGI+PIV++G+V QLL G+K+I VD + + DR AQKL IL+A+G+A YV++GMYG S LG G +L++LQL FAGI+VI LDELLQKGYGLGSG Sbjct: 3 GFRVLDLVKPFTPFMPEVIAPERKVAFQQRLMWTGVTLLIFLVMSEIPLYGIASSDGSDPLYWLRMMLASNRGTLMELGISPIVSAGMVFQLLQGTKLITVDMSNKNDRDQFQTAQKLFAILLAVGQATVYVLTGMYGPPSSLGTGVCLLLVLQLVFAGIVVILLDELLQKGYGLGSG 180 HSP 2 Score: 47.7506 bits (112), Expect = 1.071e-65 Identity = 20/34 (58.82%), Postives = 24/34 (70.59%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLF A N+CE + WKAF+PTT N G G+ G Sbjct: 180 GISLFTATNVCEQVFWKAFAPTTSNIGKGTEFEG 213
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_NEUCR (Protein transport protein SEC61 subunit alpha OS=Neurospora crassa GN=sec-61 PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 2.376e-65 Identity = 105/176 (59.66%), Postives = 140/176 (79.55%), Query Frame = 2 Query: 155 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 R L LV+PF+PFLPEVQ + KIPF +K+++T ++L IFLV SQ+PLYGI S+ +DP YW+R+++ASNRGT+MELGITPI++SG+V QLLAG+ +I+V+ +++ DR L AQKL ++++IG A YV +G+YG S LGAG L+ILQL AG+IVI LDELLQKGYGLGSG Sbjct: 5 RFLDLVKPFVPFLPEVQQPETKIPFNQKLMWTGLTLLIFLVMSQMPLYGIVSSDTSDPLYWLRMMMASNRGTLMELGITPIISSGMVFQLLAGTHMIDVNLDLKADRELYQTAQKLFAVILSIGTATVYVFTGLYGPPSDLGAGIVFLLILQLVVAGMIVILLDELLQKGYGLGSG 180 HSP 2 Score: 53.9138 bits (128), Expect = 2.376e-65 Identity = 24/29 (82.76%), Postives = 27/29 (93.10%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPG 767 GISLFIA NICESI+WKAFSPT+IN+G G Sbjct: 180 GISLFIATNICESIMWKAFSPTSINTGRG 208
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_YARLI (Protein transport protein SEC61 subunit alpha OS=Yarrowia lipolytica GN=SEC61 PE=3 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 5.267e-65 Identity = 101/178 (56.74%), Postives = 141/178 (79.21%), Query Frame = 2 Query: 149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 G R L LV+PF PFLPEVQ+ +RK+PF +K+++T ++L IFLV S++PLYGI+S+ +D YW+R++LASNRG++MELGITPIV+SG+V QLL G+++IEV+ +++ DR L AQKL I++++G+A YV++GMYG LG G +L+I QL A ++VI LDELLQKGYGLGSG Sbjct: 3 GVRFLDLVKPFTPFLPEVQAPERKVPFNQKIMWTAVTLMIFLVMSEIPLYGINSSDKSDALYWLRMMLASNRGSLMELGITPIVSSGMVFQLLGGTQLIEVNMDLKSDRELYQTAQKLFAIILSLGQATVYVLTGMYGPPKDLGVGVCLLLIFQLVLAALVVILLDELLQKGYGLGSG 180 HSP 2 Score: 51.6026 bits (122), Expect = 5.267e-65 Identity = 22/29 (75.86%), Postives = 24/29 (82.76%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPG 767 GISLFIA NICE I WKAF+PTT+N G G Sbjct: 180 GISLFIATNICEQIFWKAFAPTTVNKGRG 208
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_CANAL (Protein transport protein SEC61 subunit alpha OS=Candida albicans GN=SEC61 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 9.760e-64 Identity = 109/178 (61.24%), Postives = 141/178 (79.21%), Query Frame = 2 Query: 149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 GFRVL LV+PF PFLPEV + +RK+ F+++V++T+I+L IFLV S++PLYGI S+ +DP +W+R++LASNRGT+MELGI+PIV+SG++ QLL G+KII VD + DR AQKLL IL+A+G+A YV++GMYG S LG G L+ILQL FA IVI LDELLQKGYGLGSG Sbjct: 3 GFRVLDLVKPFSPFLPEVIAPERKVQFQQRVMWTIITLLIFLVMSEIPLYGIASSDSSDPLFWLRMMLASNRGTLMELGISPIVSSGMLFQLLQGTKIIHVDMQNKNDRETFQTAQKLLAILLAVGQATVYVLTGMYGPPSSLGVGVCSLLILQLVFASTIVILLDELLQKGYGLGSG 180 HSP 2 Score: 42.743 bits (99), Expect = 9.760e-64 Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS 770 G+SLF A N CE + WKAF+PTT S G+ Sbjct: 180 GVSLFTATNTCEQVFWKAFAPTTSTSAKGT 209
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_HANAN (Protein transport protein SEC61 subunit alpha OS=Hansenula anomala GN=SEC61 PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.679e-63 Identity = 102/177 (57.63%), Postives = 140/177 (79.10%), Query Frame = 2 Query: 152 FRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 FRVL LV+P +LPEV + +RK+PF +K+++T ++L IFLV S++PLYGI S+ +DP +W+R++LASNRGT+MELGI+PIV+SG+V QLL G+++++V+ + DR AQKL IL++IG+A YV++G+YG S LG G +L+ILQL FAGIIVI LDELLQKGYGLGSG Sbjct: 4 FRVLDLVKPLTGYLPEVIAPERKVPFNQKLMWTGVTLLIFLVMSEIPLYGIVSSESSDPLFWLRMMLASNRGTLMELGISPIVSSGMVFQLLQGTQLLDVNLESKTDRETFQTAQKLFAILLSIGQATVYVLTGIYGRPSDLGVGVCLLLILQLVFAGIIVILLDELLQKGYGLGSG 180 HSP 2 Score: 51.6026 bits (122), Expect = 3.679e-63 Identity = 22/34 (64.71%), Postives = 26/34 (76.47%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLF+A NICE I WKAF+PTT+N+G G G Sbjct: 180 GISLFMATNICEQIFWKAFAPTTVNNGRGDEFEG 213 The following BLAST results are available for this feature:
BLAST of CN189069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189069 ID=CN189069; Name=CN189069; organism=Citrus sinensis; type=EST; length=798bpback to top |