CN189069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_SCHPO (Protein transport protein sec61 subunit alpha OS=Schizosaccharomyces pombe GN=sec61 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 2.145e-60 Identity = 102/176 (57.95%), Postives = 139/176 (78.98%), Query Frame = 2 Query: 155 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 R L LV+PF PFLPE+ + +RK+PF++K+++T ++L IFLV SQ+PLYGI S+ +DP W+R+ILA+NRGT+MELGI+PIVTS +++QLL GS++IEV+ ++ DR + QK L I+IA G+A AYV++GMYG LGAG +L+ILQL A +IV+ LDELLQKGYGLGSG Sbjct: 5 RFLDLVKPFAPFLPEIAAPERKVPFKQKMLWTGVTLLIFLVMSQVPLYGIVSSDSSDPLLWLRMILAANRGTLMELGISPIVTSSMLVQLLVGSQLIEVNMELKSDREMYQLVQKFLAIIIAFGQATAYVLTGMYGRPQDLGAGICLLLILQLAAASLIVLLLDELLQKGYGLGSG 180 HSP 2 Score: 40.4318 bits (93), Expect = 2.145e-60 Identity = 19/29 (65.52%), Postives = 21/29 (72.41%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPG 767 GISLFIA CE+I WKAFSPTT + G Sbjct: 180 GISLFIATINCENIFWKAFSPTTYHIANG 208
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_ASHGO (Protein transport protein SEC61 subunit alpha OS=Ashbya gossypii GN=SEC61 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 7.345e-58 Identity = 93/176 (52.84%), Postives = 134/176 (76.14%), Query Frame = 2 Query: 155 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 R+L L +PF FLPEV + +RK+P+ +K+I+T +SL IFLV Q+PLYGI S+ G+DP W+R +LASNRGT+MELG++PI+TS ++ Q L G+++++V+ ++DR L AQK+ I++ +G+A+ V++G YGSVS LG ++L+ILQL FA IV+ LDELL KGYGLGSG Sbjct: 4 RLLDLFKPFEAFLPEVIAPERKVPYNQKLIWTAVSLLIFLVLGQIPLYGIVSSEGSDPLQWLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVNLESKQDRELFQIAQKVCAIVLTLGQAIVVVLTGNYGSVSNLGIAISLLLILQLVFASFIVLLLDELLIKGYGLGSG 179 HSP 2 Score: 47.7506 bits (112), Expect = 7.345e-58 Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLF A NI E I WKAF+PTT+N+G G+ G Sbjct: 179 GISLFTATNIAEQIFWKAFAPTTVNNGRGTEFEG 212
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_CANGA (Protein transport protein SEC61 subunit alpha OS=Candida glabrata GN=SEC61 PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.248e-57 Identity = 94/176 (53.41%), Postives = 130/176 (73.86%), Query Frame = 2 Query: 155 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 R+L L +PF FLPEV S +RK+P+ +K+I+T +SL IFLV Q+PLYGI S +DP YW+R +LASNRGT+MELG++PI+TS ++ Q L G+++++V + +EDR L AQK+ I++ G+A+ VM+G YGS S LG ++L+I QL FA IV+ LDELL KGYGLGSG Sbjct: 4 RILSLFKPFEAFLPEVISPERKVPYNQKLIWTGVSLLIFLVLGQIPLYGIVSAETSDPLYWLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVSLDSKEDRELYQIAQKVCAIILTFGQALVVVMTGNYGSPSDLGIAISLLLIFQLMFASFIVLLLDELLTKGYGLGSG 179 HSP 2 Score: 48.9062 bits (115), Expect = 1.248e-57 Identity = 22/34 (64.71%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLF A NI E+I WKAF+PTT+NSG G G Sbjct: 179 GISLFTATNIAENIFWKAFAPTTVNSGRGKEFEG 212
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_YEAST (Protein transport protein SEC61 OS=Saccharomyces cerevisiae GN=SEC61 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.133e-55 Identity = 89/176 (50.57%), Postives = 131/176 (74.43%), Query Frame = 2 Query: 155 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 RVL L +PF FLPEV + +RK+P+ +K+I+T +SL IFL+ Q+PLYGI S+ +DP YW+R +LASNRGT++ELG++PI+TS ++ Q L G++++++ ++DR L AQK+ I++ +G+A+ VM+G YG+ S LG +L+I QL FA +IV+ LDELL KGYGLGSG Sbjct: 5 RVLDLFKPFESFLPEVIAPERKVPYNQKLIWTGVSLLIFLILGQIPLYGIVSSETSDPLYWLRAMLASNRGTLLELGVSPIITSSMIFQFLQGTQLLQIRPESKQDRELFQIAQKVCAIILILGQALVVVMTGNYGAPSDLGLPICLLLIFQLMFASLIVMLLDELLSKGYGLGSG 180 HSP 2 Score: 47.3654 bits (111), Expect = 1.133e-55 Identity = 21/34 (61.76%), Postives = 24/34 (70.59%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLF A NI E I W+AF+PTT+NSG G G Sbjct: 180 GISLFTATNIAEQIFWRAFAPTTVNSGRGKEFEG 213
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_KLULA (Protein transport protein SEC61 subunit alpha OS=Kluyveromyces lactis GN=SEC61 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.233e-54 Identity = 88/176 (50.00%), Postives = 129/176 (73.30%), Query Frame = 2 Query: 155 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 RVL L +PF +LPEV + +R +P+++K+I+T +SL +FLV Q+PLYGI S+ +DP YW+R +LASNRGT+MELG++PI+TS ++ Q L G+++++V+ ++DR L AQK+ IL+ G+A+ V++G YG S LG ++L+I QL FA V+ LDELL KGYGLGSG Sbjct: 4 RVLDLFKPFEAYLPEVIAPERPVPYKQKLIWTGVSLLVFLVLGQIPLYGIVSSETSDPLYWLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVNMENKQDRELYQIAQKVFAILLTFGQAIVVVLTGNYGKPSDLGLAISLLLIFQLIFASFTVLLLDELLSKGYGLGSG 179 HSP 2 Score: 45.8246 bits (107), Expect = 1.233e-54 Identity = 21/34 (61.76%), Postives = 23/34 (67.65%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLF A NI E I WKAF+PTT+N G G G Sbjct: 179 GISLFTATNIAEQITWKAFAPTTVNVGRGQEFEG 212
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SECY_METTH (Preprotein translocase subunit secY OS=Methanobacterium thermoautotrophicum GN=secY PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.207e-30 Identity = 68/169 (40.24%), Postives = 107/169 (63.31%), Query Frame = 2 Query: 176 PFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 P LP+V+S ++PFREK+ +T I L ++ +Q+PLYG+ S D F R +LA N G+++ LGI PIV++ +++QLL G KI+++D + ED+A G QKLL I+ EA+ +V++ GS++ ++ILQL GI++I LDE++ K +G GSG Sbjct: 10 PLFSVLPQVKSPGYRVPFREKLKWTGIILVLYFFLAQIPLYGL-SANAVDQFAQFRAVLAGNFGSILTLGIGPIVSASIILQLLVGGKILKLDLSRHEDKAFFQGLQKLLAIVFTFFEALIFVLT---GSLAPSAPQFVWVLILQLTIGGILIIFLDEVVSK-WGFGSG 173 HSP 2 Score: 27.7202 bits (60), Expect = 2.207e-30 Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPG 767 G+ LFIA + + II AF+P + + PG Sbjct: 173 GVGLFIAAGVSQEIIVGAFNPLSAPTQPG 201
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SECY_PYRFU (Preprotein translocase subunit secY OS=Pyrococcus furiosus GN=secY PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 4.870e-30 Identity = 64/166 (38.55%), Postives = 108/166 (65.06%), Query Frame = 2 Query: 188 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVS-QLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 + PEV+ R++P RE+ ++T ++L ++ V +++P+YGI D F ++RV+LA G+++ LGI PIVT+G+++QLL GS+II++D EDR Q++ + + EA +++ G +G V + A+L+ILQL GI++I LDEL+ K +G+GSG Sbjct: 13 WFPEVERPKRRVPLRERFMWTGVALILYYVLAEIPVYGIPERI-QDYFQFLRVVLAGRNGSILTLGIGPIVTAGIILQLLVGSEIIKLDLANPEDRRFYQALQRVFSVFMCFFEAAVWILGGAFGRVGVDVTYAIAVLMILQLAMGGIVLIILDELVSK-WGIGSG 176 HSP 2 Score: 25.7942 bits (55), Expect = 4.870e-30 Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTT 749 GISLFIA + ++I+ ++ +P T Sbjct: 176 GISLFIAAGVSQTILTRSLNPLT 198
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SECY_PYRAB (Preprotein translocase subunit secY OS=Pyrococcus abyssi GN=secY PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.089e-29 Identity = 66/166 (39.76%), Postives = 107/166 (64.46%), Query Frame = 2 Query: 188 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVS-QLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 + PEV+ + +P +EK ++T ++L ++ V +++P+YGI D F ++RV+LA G+++ LGI PIVT+G+++QLL GS+II++D EDR Q++ + + EA +V+ G +G V + A L+ILQL F GII+I LDEL+ K +G+GSG Sbjct: 13 WFPEVERPKKHVPLKEKFMWTGLALILYYVLAEIPVYGIPERI-QDYFQFLRVVLAGRNGSILTLGIGPIVTAGIILQLLVGSEIIKLDLANPEDRRFYQALQRVFSVFMCFLEAAIWVLGGAFGRVGVDVTYAIAALMILQLAFGGIILIVLDELVSK-WGIGSG 176 HSP 2 Score: 25.0238 bits (53), Expect = 3.089e-29 Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTT 749 GISLFIA + + I+ ++ +P T Sbjct: 176 GISLFIAAGVSQRILTRSLNPLT 198
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SECY_PYRHO (Preprotein translocase subunit secY OS=Pyrococcus horikoshii GN=secY PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.626e-28 Identity = 63/166 (37.95%), Postives = 105/166 (63.25%), Query Frame = 2 Query: 188 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVS-QLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 + PEV+ + +P +EK ++T ++L ++ V +++P+YGI D F ++RV+LA G+++ LGI PIVT+G+++QLL GS++I +D EDR Q++ + + EA +V+ G +G V + A L+I+QL GII+I LDEL+ K +G+GSG Sbjct: 13 WFPEVERPKKHVPLKEKFVWTGLALVLYYVLAEIPVYGIPKKI-QDYFQFLRVVLAGRNGSILTLGIGPIVTAGIILQLLVGSELIRLDLANPEDRRFYQALQRVFSVFMCFFEAAIWVLGGAFGRVGVDVTYTIATLMIIQLALGGIILIVLDELVSK-WGIGSG 176 HSP 2 Score: 25.0238 bits (53), Expect = 5.626e-28 Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTT 749 GISLFIA + + I+ ++ +P T Sbjct: 176 GISLFIAAGVSQRILTRSLNPLT 198
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SECY_METJA (Preprotein translocase subunit secY OS=Methanocaldococcus jannaschii GN=secY PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 2.100e-27 Identity = 71/169 (42.01%), Postives = 110/169 (65.09%), Query Frame = 2 Query: 176 PFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 P L +PEV+ ++I F+EK+ +T I L ++ + + +Y + A +W + I AS GT++ LGI PIVT+G++MQLL GS II++D ++ E+RAL G QKLL I++ EAV +V +G +G ++ L A L+I+Q+ F II+I LDE++ K YG+GSG Sbjct: 6 PILEKIPEVELPVKEITFKEKLKWTGIVLVLYFIMGCIDVYTAGAQIPAIFEFW-QTITASRIGTLITLGIGPIVTAGIIMQLLVGSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGAGAFGILTPL---LAFLVIIQIAFGSIILIYLDEIVSK-YGIGSG 169 The following BLAST results are available for this feature:
BLAST of CN189069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189069 ID=CN189069; Name=CN189069; organism=Citrus sinensis; type=EST; length=798bpback to top |