CN189069

Overview
NameCN189069
Unique NameCN189069
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: YGMH_SCHPO (Uncharacterized protein C19G7.17 OS=Schizosaccharomyces pombe GN=SPBC19G7.17 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 3.582e-27
Identity = 67/179 (37.43%), Postives = 102/179 (56.98%), Query Frame = 2
Query:  146 GGFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            GG R ++ ++P    LPEV+     +   EK+ +    + ++ + S +P+YG   T   DP    RV+  S+   +M  G+ PI  S  ++Q+LA  K I V+ N+  DR L   AQK++  L+ +  AV YV SG YGS S LG    I++ILQ+   GI+ I L E+++KG+GLGSG
Sbjct:    2 GGARFINFIKPLSSLLPEVEGPKTHLELVEKLGWMAGCVVVYQILSIIPVYGAEKTDTLDPINNFRVLDGSSASGLMITGLAPIYLSSFLLQILASKKKIAVNFNLIIDRVLFQNAQKVVSALLYLILAVTYVSSGYYGSFSDLGIFRFIMLILQIFLPGIVCIYLCEIIEKGHGLGSG 180          
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SECY_SULAC (Preprotein translocase subunit secY OS=Sulfolobus acidocaldarius GN=secY PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.641e-27
Identity = 63/168 (37.50%), Postives = 101/168 (60.12%), Query Frame = 2
Query:  191 LPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG-ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGN---AILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            LP V     K     K+++T I L ++L+ + +PLYG+ S+      F   ++I AS++GT+ +LGI P++TSGL+MQ+L GSK+I VD   +E ++    A+K L ++  I      V S ++G V      N    I++++QL  A  I++ LDE++QKG+GLGSG
Sbjct:   14 LPAVSKPKDKPTLTRKLLWTFIGLIVYLLMASIPLYGVTSSNSFLSNFLAQQIIFASSQGTLAQLGIGPVITSGLIMQILVGSKLINVDLTTQEGKSKFTQAEKALALIFII------VESSLFGYVFTRATSNILLPIIVVVQLIIASYIILLLDEMIQKGWGLGSG 175          

HSP 2 Score: 25.409 bits (54), Expect = 4.641e-27
Identity = 12/31 (38.71%), Postives = 16/31 (51.61%), Query Frame = 3
Query:  672 WALG--ISLFIAPNICESIIWKAFSPTTINS 758
            W LG  +SLFI   I + I W  F   ++ S
Sbjct:  170 WGLGSGVSLFIMAGIMKVIFWNMFGIVSVQS 200          
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SSH1_YEAST (Sec sixty-one protein homolog OS=Saccharomyces cerevisiae GN=SSH1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.109e-27
Identity = 68/184 (36.96%), Postives = 108/184 (58.70%), Query Frame = 2
Query:  149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGA---DPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYG---SVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            GFR++ +V+P LP LPEV+    K+PF +K++YT+ +  I+L  +Q PL G+   T     DP Y++R +      T++E G+ P ++SGL++QLLAG K+I+V+  ++ DR L     K+  I+  +     ++ +G +G   SV Q+G     LI  QL  AGI    L E++ KG+G  SG
Sbjct:    3 GFRLIDIVKPILPILPEVELPFEKLPFDDKIVYTIFAGLIYLF-AQFPLVGLPKATTPNVNDPIYFLRGVFGCEPRTLLEFGLFPNISSGLILQLLAGLKVIKVNFKIQSDRELFQSLTKVFAIVQYVILTNIFIFAGYFGDDLSVVQIG-----LINFQLVGAGIFTTLLAEVIDKGFGFSSG 180          
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SECY_AERPE (Preprotein translocase subunit secY OS=Aeropyrum pernix GN=secY PE=3 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 2.939e-26
Identity = 64/164 (39.02%), Postives = 98/164 (59.76%), Query Frame = 2
Query:  194 PEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMY--GSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGS 679
            P V+  +RK     ++ +T + L ++ + S +PLYGI            R+I AS+ GT+MELGI PIVT+ L++Q+L G+KII++D    E R     AQK+L +  A  EAVA+ + G Y  G+  + G  +  L+ LQL    ++VI  DE++QKG+G+GS
Sbjct:   15 PAVRKPERKPTLYRRLAWTGVILVLYFIMSNIPLYGIPPQNIGGQVDLQRIIFASSAGTLMELGIGPIVTASLIIQVLVGAKIIKLDLADPEGRRKFTSAQKVLALAFAALEAVAFTVGGRYWVGTAIEPGPLDYALVSLQLFLGALLVIYFDEVMQKGWGIGS 178          

HSP 2 Score: 25.0238 bits (53), Expect = 2.939e-26
Identity = 9/24 (37.50%), Postives = 14/24 (58.33%), Query Frame = 3
Query:  672 WALG--ISLFIAPNICESIIWKAF 737
            W +G  ISLFI   + + ++W  F
Sbjct:  174 WGIGSAISLFILAGVAQGVVWSIF 197          
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SECY_SULSO (Preprotein translocase subunit secY OS=Sulfolobus solfataricus GN=secY PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.478e-26
Identity = 62/167 (37.13%), Postives = 102/167 (61.08%), Query Frame = 2
Query:  188 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAV--AYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            +LP V     K    +K++++++++ I+L+ +  PLYGI S +        ++I AS  GT+ +LGI PI+T+GL+MQ+LAGSK+I +D N  +DR     AQK L  +  + E+    YV++    +++      A ++I QL  A  +++ LDEL+QKG+GLGSG
Sbjct:   13 YLPAVTKPKEKPSLGQKLVWSLVAVIIYLIMASTPLYGITSASFFKNLILEQIIFASTTGTLAQLGIGPIITAGLIMQILAGSKLISIDLNDPDDRVKFTEAQKGLAFIFILVESALFGYVLARTSTTINASILFIAGIVIAQLIVATYLILLLDELIQKGWGLGSG 179          

HSP 2 Score: 23.8682 bits (50), Expect = 6.478e-26
Identity = 10/31 (32.26%), Postives = 17/31 (54.84%), Query Frame = 3
Query:  672 WALG--ISLFIAPNICESIIWKAFSPTTINS 758
            W LG  +SLFI   + + + W  F   +++S
Sbjct:  174 WGLGSGVSLFILAGVMKIMFWDMFGIASVSS 204          
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SECY_METVA (Preprotein translocase subunit secY OS=Methanococcus vannielii GN=secY PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.505e-25
Identity = 64/171 (37.43%), Postives = 108/171 (63.16%), Query Frame = 2
Query:  170 VRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            ++P L  +PEV+   + + F+EK+ +T + L ++ +   + +Y   +   A   +W + + AS  GT++ LGI PIVT+G++MQLL GS++I +D +   +RAL  G QKL GI +   EAV +V +G +G V+   +  A++++LQL    I+VI LDE++ + YG+GSG
Sbjct:    3 IKPILELIPEVKRPLKGVSFKEKIQWTGLVLILYFILGTIDIYMGGAEMPAMFAFW-QTVTASKMGTLITLGIGPIVTAGIIMQLLVGSELISLDLSKPMNRALFQGLQKLFGIFLCFLEAVMFVGAGAFGVVN---STLALILVLQLALGAILVIYLDEIVSR-YGIGSG 168          
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SECY_ARCFU (Preprotein translocase subunit secY OS=Archaeoglobus fulgidus GN=secY PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.952e-21
Identity = 58/182 (31.87%), Postives = 102/182 (56.04%), Query Frame = 2
Query:  158 VLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGM----YGSVSQLGAGNAI---LIILQLCFAGIIVICLDELLQKGYGLGSG 682
            V+  ++P+   +P V+     + FREK  +T   L ++ + S +P++G+ S    D F   R + A + G+++ LGI PIVT+ +++QLL G+ II++D    EDRA     Q+ L  ++   EA+  +  G+        +QLG    I   LI +QL   G++++ +DE++ K +G+GSG
Sbjct:    4 VIRALQPYFERIPSVERPKGHVHFREKFGWTAAILLLYFILSNVPVFGL-SPESIDIFAAYRALFAGSTGSIIALGIGPIVTASIILQLLVGAGIIKLDLTNPEDRAAYQDFQRFLVFVMIAVEAIPQIAGGLLKPDLNLAAQLGVSPGIISFLIFIQLFIGGVLIVYMDEVVSK-WGIGSG 183          

HSP 2 Score: 21.1718 bits (43), Expect = 6.952e-21
Identity = 9/20 (45.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  681 GISLFIAPNICESIIWKAFS 740
            G+SLFI   I +SI+   F+
Sbjct:  183 GVSLFILAGIAQSIVVGLFN 202          
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SECY_HALSA (Preprotein translocase subunit secY OS=Halobacterium salinarium GN=secY PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.486e-20
Identity = 61/178 (34.27%), Postives = 102/178 (57.30%), Query Frame = 2
Query:  176 PFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVD-NNVREDRALLNGAQK-LLGILIAIGEAVAYVMSGMYGSVSQLGA-------GNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            P L  +P V+  +  +PFR K+ +T   L ++   + +PL+GI  T G D F   R +LA  +GTV++LGI PIVT+ +V+QLL G+ ++ +D +N   D+A+  G QK L+G+++ +  A    +        QL         G  +LI  Q+   GI+++ +DE++ K +G+GSG
Sbjct:    9 PVLTRMPAVERPEGHVPFRRKMYWTGGVLVLYFFLTNVPLWGIQ-TAGNDFFGQFRSLLAGGQGTVLQLGIGPIVTASIVLQLLGGANLLGLDTDNDPRDQAIYQGLQKFLVGVMVVLTGAPMVFLGNFLQPSQQLAQSMPGGAFGVEVLIFAQIAAGGILLLFMDEVISK-WGVGSG 184          
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SECY_HALVO (Preprotein translocase subunit secY OS=Halobacterium volcanii GN=secY PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.689e-19
Identity = 63/180 (35.00%), Postives = 103/180 (57.22%), Query Frame = 2
Query:  176 PFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKI--IEVDNNVREDRALLNGAQKLL-GILIAIGEAVAYVMSGMYGSVSQ-----LGAGNA---ILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            P L  +P V   +  +PFR K+ +T   L ++   + + L+G+ + T  D F   R ILA  +G+V++LGI PIVT+ +V+QLL G+ +  ++ DNN R D+ L  G QKLL G++I +   +  V +G +    Q     LG G      LI  Q+   G++++ +DE++ K +G+GSG
Sbjct:    9 PVLSRMPAVARPEGHVPFRRKLGWTGGILVLYFFLTNVTLFGLDAATANDLFGQFRSILAGQQGSVLQLGIGPIVTASIVLQLLGGADLLGLDTDNNPR-DQVLYQGLQKLLVGVMICL-TGLPMVFAGNFLPADQAVATSLGIGTVGVKGLIFAQIAVGGVLILFMDEIVSK-WGVGSG 185          
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SECY_HALMA (Preprotein translocase subunit secY OS=Haloarcula marismortui GN=secY PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.486e-17
Identity = 55/178 (30.90%), Postives = 98/178 (55.06%), Query Frame = 2
Query:  176 PFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVD-NNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMY-----GSVSQLGAGNA---ILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            P L  +P VQ  +  +PF+ K+ +T   L ++   + + L+G+        F     ILAS +G++M+LGI PIVT+ +V+QLL G+ ++ ++  +   D+ L  G QKLL +++     +  V +G +        + LG G A    LI  Q+   G++++ +DE++ K +G+GSG
Sbjct:    9 PLLVRMPAVQRPEGHVPFKRKLTWTGGVLLLYFFLTNVKLFGLDIDASQQVFGRFSSILASGQGSIMQLGIGPIVTASIVLQLLGGADLLGLNTQDDPRDQILYQGLQKLLVLVMICLTGLPMVFAGGFLPADTAVANSLGIGTAGVQWLIFAQMFVGGVLILFMDEVISK-WGVGSG 185          
The following BLAST results are available for this feature:
BLAST of CN189069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
YGMH_SCHPO3.582e-2737.43Uncharacterized protein C19G7.17 OS=Schizosaccharo... [more]
SECY_SULAC4.641e-2737.50Preprotein translocase subunit secY OS=Sulfolobus ... [more]
SSH1_YEAST6.109e-2736.96Sec sixty-one protein homolog OS=Saccharomyces cer... [more]
SECY_AERPE2.939e-2639.02Preprotein translocase subunit secY OS=Aeropyrum p... [more]
SECY_SULSO6.478e-2637.13Preprotein translocase subunit secY OS=Sulfolobus ... [more]
SECY_METVA1.505e-2537.43Preprotein translocase subunit secY OS=Methanococc... [more]
SECY_ARCFU6.952e-2131.87Preprotein translocase subunit secY OS=Archaeoglob... [more]
SECY_HALSA2.486e-2034.27Preprotein translocase subunit secY OS=Halobacteri... [more]
SECY_HALVO4.689e-1935.00Preprotein translocase subunit secY OS=Halobacteri... [more]
SECY_HALMA7.486e-1730.90Preprotein translocase subunit secY OS=Haloarcula ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E08_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189069 ID=CN189069; Name=CN189069; organism=Citrus sinensis; type=EST; length=798bp
GAGGAAGGGTTTTATAATATTTCAACGTTCAACCCTCTATCCTCCATCTT
GCATCGTTGGAGTTGGTGTTGCCACTGATTCCGAGCCTCTGCTCAAAGTC
AAAGCTTGTCGATCTATTCAGATCTGCTCATTTTTGAAAATGGGAGGAGG
ATTTAGAGTGCTGCATTTGGTGAGACCATTTCTTCCATTTTTGCCGGAGG
TTCAGTCAGCTGACAGGAAAATTCCCTTCCGAGAGAAGGTGATCTACACT
GTCATTTCACTTTTCATCTTTCTGGTATGCAGTCAGCTTCCACTTTATGG
CATCCATTCCACCACCGGTGCTGATCCCTTTTATTGGATGCGTGTTATTC
TTGCATCAAACCGGGGAACTGTGATGGAACTTGGGATTACCCCCATTGTG
ACTTCTGGACTTGTGATGCAACTCTTGGCTGGGTCCAAGATTATTGAGGT
GGATAACAATGTTCGTGAGGATCGTGCGCTCTTAAATGGGGCACAGAAGC
TGTTGGGCATCCTGATTGCTATCGGTGAGGCTGTTGCCTACGTGATGTCG
GGGATGTATGGAAGTGTCAGCCAGCTTGGTGCTGGGAATGCTATTCTCAT
AATCCTCCAACTTTGCTTTGCTGGAATCATTGTGATATGCCTGGATGAAC
TTCTGCAGAAGGGATATGGTTTGGGCTCTGGGAATCTCCCTTTTCATAGC
CCCTAACATTTGTGAAAGCATTATTTGGAAAGCTTTTAGCCCCACAACCA
TAAACAGTGGCCCGGGGAGCTGAATTCGAGGGTGCTGTTATTGCTCTG
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