CN189068
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189068 vs. ExPASy Swiss-Prot
Match: SECY_METJA (Preprotein translocase subunit secY OS=Methanocaldococcus jannaschii GN=secY PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 48/134 (35.82%), Postives = 81/134 (60.45%), Query Frame = -2 Query: 255 VGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 650 V G+AYY++ P L+ + ++P HA+ Y++ M+ C +F W+E +G + +AK++ M + G R S ++ L RYIP +G L +A+F+GA+G GTG+LL V+I+Y+ +E +E+ SEL Sbjct: 293 VDGIAYYLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIGSLGMAIKGFRKSEKAIEHRLKRYIPPLTVMSSAFVGFLATIANFIGALGGGTGVLLTVSIVYRMYEQLLREKVSEL 426
BLAST of CN189068 vs. ExPASy Swiss-Prot
Match: SECY_ARCFU (Preprotein translocase subunit secY OS=Archaeoglobus fulgidus GN=secY PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17 Identity = 47/114 (41.23%), Postives = 71/114 (62.28%), Query Frame = -2 Query: 255 HALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG--SGTGILLAVTIIYQYFETFEKERASEL 584 H L + ++ +F+ W+E SG AR VA Q+ + M +PG R S L++ L+RYIP GG IG LT++A+ +G IG SGTG+LLAV+I Y+++E KE+ +E+ Sbjct: 368 HLLIDALILVVGGIIFAWFWVETSGMDARTVASQIAKSGMQVPGFRKSPQVLERVLSRYIPKVTILGGAIIGILTLVANMLGTIGNVSGTGLLLAVSIAYRFYEDLAKEQLTEM 481
BLAST of CN189068 vs. ExPASy Swiss-Prot
Match: SECY_HALVO (Preprotein translocase subunit secY OS=Halobacterium volcanii GN=secY PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.772e-16 Identity = 49/145 (33.79%), Postives = 80/145 (55.17%), Query Frame = -2 Query: 255 GGLAYYVTAPASLADM-------AANPF----HALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG-SGTGILLAVTIIYQYFETFEKERASEL 647 GGL YY+ S +D +A+P L L+FM+ A+F+ W+E +G + A+Q++ M +PG R + +++ + RYIP GG +G L V+A+ +G IG SGTG+LL V+I Y+ +E +E+ E+ Sbjct: 333 GGLLYYLAPIQSRSDWMWFLGLTSADPLDIAIRVLIDLIFMIVGGAVFAIFWVETTGMGPKSTAQQIQNSGMQIPGFRRNPQVIERVMERYIPQVTVIGGALVGLLAVMANMLGTIGASGTGLLLTVSITYKLYEEIAEEQLMEM 477
BLAST of CN189068 vs. ExPASy Swiss-Prot
Match: SECY_AERPE (Preprotein translocase subunit secY OS=Aeropyrum pernix GN=secY PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15 Identity = 42/130 (32.31%), Postives = 70/130 (53.85%), Query Frame = -2 Query: 258 LAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASE 641 + YY++ P + A+P ++ +F W+E++G + R+ A++L + + +PG R L++ L RYI + + AL ++AD GA G+GTG+LLAV II QY+ +ERA E Sbjct: 314 IVYYLSPPRGVVQSIADPVKTAVFIASWTVLSIVFGYMWVEIAGLNPREQAERLIKGGLAIPGMRSDPRVLERVLRRYIYPLTFLSSLIVAALVIVADIFGAYGTGTGLLLAVGIINQYYAMITRERALE 443
BLAST of CN189068 vs. ExPASy Swiss-Prot
Match: YGMH_SCHPO (Uncharacterized protein C19G7.17 OS=Schizosaccharomyces pombe GN=SPBC19G7.17 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.699e-15 Identity = 40/122 (32.79%), Postives = 65/122 (53.28%), Query Frame = -2 Query: 285 VGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFE 650 VGGL Y++ P L++ +P H + Y + ++ FS W+ + RDV KE Q+V+ G+R++ + KEL + IP AA + L+V+A A G G+L+A ++Y FE Sbjct: 342 VGGLVYFLYPPLGLSEALLHPVHTVIYTITLICITIYFSLLWMNATAGGPRDVLLFFKENQLVIAGYREATMLKELEKIIPIAAKLSAFFVSILSVIAGIF-ASTFGVGVLIASALVYASFE 462
BLAST of CN189068 vs. ExPASy Swiss-Prot
Match: SECY_HALMA (Preprotein translocase subunit secY OS=Haloarcula marismortui GN=secY PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14 Identity = 50/148 (33.78%), Postives = 73/148 (49.32%), Query Frame = -2 Query: 255 PVGGLAYYVTAPASLADM------AANPFHALFY-----LVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG--SGTGILLAVTIIYQYFETFEKERASEL 653 P GGL Y++ S D A P + L ML A+F+ W+E + AKQ+ M +PG R + ++K L RYIP GG +G L V+A+ +G IG SGTG+LL V+I Y+ +E +E+ E+ Sbjct: 331 PTGGLFYFLAPIQSRGDWMWWLEGTAQPVWQILTRVGIDLFVMLVGGAVFAVFWVETTDMGPEATAKQIHNSGMQIPGFRQNVGVIEKVLERYIPQVTVIGGALVGLLAVMANMLGTIGGVSGTGLLLTVSITYKLYEEIAEEQLMEM 478
BLAST of CN189068 vs. ExPASy Swiss-Prot
Match: SECY_SULSO (Preprotein translocase subunit secY OS=Sulfolobus solfataricus GN=secY PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14 Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = -2 Query: 255 PASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 620 P S+ + +P AL Y V + LF W++V+G A+QL E + +PG R++ ++ L RYI A F + +G + V A +GA G+G GILLAVTI QY+ ER+ E+ Sbjct: 336 PHSIYAVVLDPLGALEYAVVFIVLSILFGILWVDVAGLDPATQAQQLVEAGIEIPGVRNNPKIIEGILARYIYPLAFFSSIIVGLIAVFATLLGAYGTGIGILLAVTIAIQYYSLLAYERSLEM 459
BLAST of CN189068 vs. ExPASy Swiss-Prot
Match: SECY_HALSA (Preprotein translocase subunit secY OS=Halobacterium salinarium GN=secY PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.230e-14 Identity = 47/154 (30.52%), Postives = 77/154 (50.00%), Query Frame = -2 Query: 255 YSGHSIPVGGLAYYVTAPAS-------LADMAANPFHALFYLV----FMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG--SGTGILLAVTIIYQYFETFEKERASEL 671 Y G+ GGL YY+ S + A + L + FM+ A+F+ W+E + A+Q++ M +PG R + ++K + RYIP GG +G L V+A+ +G IG SGTG+LL ++I Y+ +E +E+ E+ Sbjct: 326 YGGNGQVTGGLFYYLAPIYSPNAWMWWTSGATAARWQVLIRIAIDLSFMIIGGAIFAIFWVETADMGPDATARQIQNSGMQIPGFRKNQGVIEKVMERYIPQVTVIGGALVGLLAVMANMLGTIGNVSGTGLLLTISITYKLYEEIAEEQMMEM 479
BLAST of CN189068 vs. ExPASy Swiss-Prot
Match: SSH1_YEAST (Sec sixty-one protein homolog OS=Saccharomyces cerevisiae GN=SSH1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 37/117 (31.62%), Postives = 61/117 (52.14%), Query Frame = -2 Query: 309 SIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAV 659 ++P L+ + + P + Y F+L F+ W +SGSSARDVA + K+Q + + G R+ N+ KELN+ IP AA G + +TV+ + +G G GI++ + Sbjct: 341 AVPTFPLSLLAPPTSFFKGVTQQPLTFITYSAFILVTGIWFADKWQAISGSSARDVALEFKDQGITLMGRREQNVAKELNKVIPIAAVTGASVLSLITVIGESLGLKGKAAGIVVGI 457
BLAST of CN189068 vs. ExPASy Swiss-Prot
Match: SECY_SULAC (Preprotein translocase subunit secY OS=Sulfolobus acidocaldarius GN=secY PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12 Identity = 37/124 (29.84%), Postives = 64/124 (51.61%), Query Frame = -2 Query: 255 PASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 620 P S+ + +P A Y + +F WI+V+G + A+Q+ + +PG R + ++ L++YI F + +G + V+A F+G G+G G+LLA+TI QY+ ER E+ Sbjct: 330 PHSVYALVVDPVGAAIYAAVFIVLSIVFGMLWIDVAGLDPKTQAEQMIRSGIEIPGMRTNPRIIEGILSKYIYALGFFSSLIVGLIAVVATFLGTYGTGVGLLLAITIAMQYYNLLAYERTLEM 453 The following BLAST results are available for this feature:
BLAST of CN189068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189068 ID=CN189068; Name=CN189068; organism=Citrus sinensis; type=EST; length=705bpback to top |