CN189039

Overview
NameCN189039
Unique NameCN189039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_CHRSD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gpmI PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26
Identity = 80/194 (41.24%), Postives = 107/194 (55.15%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            VA+++LDG+G+    +YN ++ A TP MD+ K+  P    LL   G  VGLP +  MGNSEVGH  LGAGRI  Q    +  A+   ++  +      I  +   G  +HL+GLLS GGVHS  D +  +   A+ERGAK + LH   DGRD    S+   +E     LAEL G   +A +AS  GR Y  MDR
Sbjct:   12 VALLILDGYGQNDDTEYNAVYSARTPVMDALKQRYPST--LLHTDGKYVGLP-DGQMGNSEVGHMNLGAGRIVYQDFTRITKAIEDNELASNPVLTAPIDAAVAAGRAVHLLGLLSPGGVHSHEDHILAVAALAAERGAKHVYLHAFLDGRDTAPKSARASLERANARLAELFGAD-NAYVASIVGR-YYAMDR 200          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_BACCN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=gpmI PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26
Identity = 80/193 (41.45%), Postives = 112/193 (58.03%), Query Frame = 1
Query:  127 AVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            A+++LDG+G  +    N +  A  P  D +    P     L A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  ++E F N IK   E GT LHL GLLSDGGVHS +D +  LL+ A++ G +++ +H   DGRDV   ++ G+++      A ++  GV  Q A+  GR Y +MDR
Sbjct:    6 ALIILDGFGLREETYGNAVAQAKKPNFDRYWNKFPHT--TLTACGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFDKNETFQNAIKHVKEKGTALHLFGLLSDGGVHSHIDHMFALLRLAAKEGVEKVYIHAFLDGRDVGPQTAKGYIDATN---AVIKETGV-GQFATIAGR-YYSMDR 190          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_SULDN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26
Identity = 72/190 (37.89%), Postives = 108/190 (56.84%), Query Frame = 1
Query:  130 VVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            +V+ DG G     +YN  + A  PT D    + P  +  +  HG +VGLP E  MGNSEVGH ++G+GR+  Q    + L+L+  +   +E F  +    ++  LHLIGL+SDGGVHS +D    +   A++ G K + LH++TDGRDV   S+  ++  +EK L      G + +IA+  GR Y +MDR
Sbjct:    7 LVITDGIGYSSGMEYNAFYNAQKPTYDKLFSNTPHSF--IETHGLSVGLP-EGQMGNSEVGHMSMGSGRVLYQDLVKISLSLSENRFRDNEAFRELLA--KSSRLHLIGLMSDGGVHSHIDHFMGIADIAAKEG-KEVFLHLITDGRDVSPTSAKKYLAQVEKHL------GANIKIATVSGRFY-SMDR 183          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_SYNPX (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. (strain WH8102) GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26
Identity = 74/194 (38.14%), Postives = 108/194 (55.67%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE--TGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            V + +LDGWG     ++N I   DTP M++   + P    L++A GS VGLP +  MGNSEVGH  +GAGRI  Q    +   +   ++        +    +  TGTLHL+GL SDGGVHS ++ L  L+  A+  G K++ +H +TDGRD    S++G +  +++ + E    GV   +AS  GR Y  MDR
Sbjct:   18 VVLTILDGWGHRNDSEHNAIRQGDTPVMEALWHAYPHA--LIQASGSHVGLP-DHQMGNSEVGHLTIGAGRIIRQELVRISDTVRDDQLNNTPALVELAEHLQNDTGTLHLLGLCSDGGVHSHVNHLCGLIHWAAAAGIKKVAVHAITDGRDTPTQSAMGSITLVQRAMEE---AGV-GHLASLCGR-YWAMDR 203          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_PROMP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26
Identity = 78/196 (39.80%), Postives = 111/196 (56.63%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQ----DEGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            V + +LDGWG  + +  N I  A+TP MDS   + P    L+ A G+ VGLP    MGNSEVGH  +G+GRI  Q    +   + + ++ Q     E  N IK   + GTLH+ GL SDGGVHS +D L  L+K ASE   +++ +HI+TDGRD    S+  ++  IE  + + +      +IAS  GR ++ MDR
Sbjct:   19 VVLAILDGWGHREENLDNAIKNANTPIMDSLWHAYPHT--LINASGADVGLPN-GQMGNSEVGHLTIGSGRIIQQELVRITNVVKNNQLTQVNELKEMANSIKK--KKGTLHITGLCSDGGVHSHIDHLLGLIKWASEEHIEKVAIHIITDGRDTPAKSAYKYIRQIEDCIKKFK----VGEIASICGRYWI-MDR 204          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_HALOH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26
Identity = 78/202 (38.61%), Postives = 118/202 (58.42%), Query Frame = 1
Query:  106 LSRNNIVAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN----YIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            ++R   +A++++DG+G  +    N I  A TP +D F +  P    +L A G AVGLP E  MGNSEVGH  LGAGRI  Q    ++ A+  G + +++       ++K +     LHL+GLLSDGGVHS ++ L  LL+ A  +  +++ +H + DGRD    S+  ++  +E+ LAEL   G+  +IA+  GR Y TMDR
Sbjct:    1 MNRPKPLALIIMDGFGLSEKSDGNAIKQAHTPNLDKFFEEYPDT--VLDASGEAVGLP-EGQMGNSEVGHLNLGAGRIVYQDYTRINKAIEEGTLPENDALKNAIQHVKDN--NSALHLMGLLSDGGVHSHINHLFGLLEMARVKNIEKVYVHPILDGRDTPPRSAEKYLNQLEEKLAEL---GI-GEIATVSGR-YYTMDR 192          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_GRATL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Gracilaria tenuistipitata var. liui GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26
Identity = 79/194 (40.72%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            + + +LDGWG  +  K N I +ADTPT+D    S P    LL A G  VGLP E  MGNSEVGH  +GAGRI  Q    +  ++     + +E  N I  K +F    LHLIGL S+GGVHS +  L  LL  A  R   +I +H +TDGRD     S  F+E I   + +         I +  GR Y +MDR
Sbjct:    4 IILTILDGWGYSENKKGNAIQIADTPTIDKLWNSYPNT--LLNASGRDVGLP-EGQMGNSEVGHTTIGAGRIINQDLVRISKSIEDRSFFNNEAINSICQKINFYNTKLHLIGLCSNGGVHSHIKHLFALLDIAM-RYKIQICIHAITDGRDTSPYGSKIFIEEINNQIQQFN----HINICTISGR-YYSMDR 188          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_CLOB1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26
Identity = 76/194 (39.18%), Postives = 109/194 (56.19%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE--TGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            V +++LDG+G       N +  A+ P +D+  K  P     L A G  VGLP E  MGNSEVGH  +GAGRI  Q    +  +++ G  +++   N    + +    TLHL+GLLS GGVHS +D L+ L+K A E+  K++ +H   DGRDV   S+  ++E IE  + E+   GV  +IA+  GR Y  MDR
Sbjct:    6 VVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQ--LGASGMDVGLP-EGQMGNSEVGHLNIGAGRIVYQALTKITKSISDGDFFENVALNKAIENVKKNNSTLHLLGLLSPGGVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSAKEYIEDIENYMNEI---GV-GEIATISGR-YYAMDR 191          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_PSEE4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas entomophila (strain L48) GN=gpmI PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.214e-25
Identity = 76/194 (39.18%), Postives = 110/194 (56.70%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            + +++LDG+G  +  +YN I  A+TP  D  + + P    L+   G  VGLP +  MGNSEVGH  LGAGR+  Q    V  A+  G+ +++        K +     +H++GLLSDGGVHS  D L  + + A++RGA++I LH   DGRD    S+   +E ++   A+L GKG   +IAS  GR Y  MDR
Sbjct:    8 LVLIILDGFGHSESPEYNAIFAANTPVYDRLRATQPHG--LISGSGMDVGLP-DGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPVLTGAVDKAASAGKAVHILGLLSDGGVHSHQDHLIAMAELAAQRGAEKIYLHAFLDGRDTPPRSAQSSIELLDATFAKL-GKG---RIASLIGR-YYAMDR 193          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_CLOK5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=gpmI PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 75/194 (38.66%), Postives = 112/194 (57.73%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSF--ETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            V +++LDG+G  K D  N +  A  P +D + K  P     L A G +VGLP E  MGNSEVGH  +GAGRI  Q    +  ++  G+ +++E  N    +       LHL+GL+S GGVHS  + L+ LL+ A ++GA R+ +H  TDGRDV   S+  +++ +EK + ++   G+  +IA+  GR Y  MDR
Sbjct:    6 VMLMILDGFGISKIDNGNAVKAAYKPNLDKYFKKYPHTE--LGASGLSVGLP-EGQMGNSEVGHLNIGAGRIVYQALTRITKSINEGQFFKNEVLNSAVDNAVKNNSDLHLLGLVSPGGVHSHTNHLKGLLQLAKQKGASRVYIHAFTDGRDVPPSSAYMYIDDMEKYIQKI---GI-GKIATVSGR-YYAMDR 191          
The following BLAST results are available for this feature:
BLAST of CN189039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GPMI_CHRSD4.173e-2641.242,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACCN4.173e-2641.452,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SULDN7.117e-2637.892,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNPX9.295e-2638.142,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PROMP9.295e-2639.802,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HALOH9.295e-2638.612,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GRATL9.295e-2640.722,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOB19.295e-2639.182,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEE41.214e-2539.182,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOK51.586e-2538.662,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001D14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001D14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189039 ID=CN189039; Name=CN189039; organism=Citrus sinensis; type=EST; length=699bp
CCGCTTGTTTGTTTGTTAGCTTTCTACGGACGCGCGATTCCCCTTCAATC
CAAAACTAATTAAGAGTGAAAGATGGATAACTGGAAATTAAAAGAGCATC
CACAGCTGTCGAGGAATAACATTGTAGCCGTTGTGGTGTTGGATGGCTGG
GGCGAGTTCAAGCCCGACAAGTATAACTGCATCCATGTCGCCGACACTCC
CACCATGGACTCTTTCAAGAAGTCTGCCCCTGGGAGGTGGAGGTTGCTCC
GAGCTCACGGTAGTGCTGTGGGGCTTCCAACTGAAGATGACATGGGTAAC
AGTGAAGTCGGTCATAATGCACTCGGTGCTGGTCGCATTTTTGCTCAAGG
TGCAAAGCTTGTTGACCTTGCTCTGGCCTCTGGGAAAATCTATCAAGATG
AGGGATTTAATTACATTAAGCCATCTTTTGAAACCGGCACATTGCACCTT
ATTGGGTTACTGAGTGATGGTGGAGTACACTCTAGGCTTGATCAACTTCA
GTTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAATTCGTCTTC
ATATTCTTACTGACGGGCGTGATGTTTTGGATGGTTCAAGCGTAGGATTC
GTAGAAACTATTGAGAAAGATCTTGCAGAATTGCGTGGGAAAGGTGTTGA
CGCGCAGATTGCATCTGGAGGAGGCCGCCTGTACGTCACGATGGACCGT
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