CN182398

Overview
NameCN182398
Unique NameCN182398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182398 vs. ExPASy Swiss-Prot
Match: MBF1_CANAL (Multiprotein-bridging factor 1 OS=Candida albicans GN=MBF1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.790e-22
Identity = 59/119 (49.58%), Postives = 74/119 (62.18%), Query Frame = -3
Query:  174 PNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 530
            P     K    +NAARRAG  + T +K   GT    S+       KLD   + +A  +V   + KAI QAR +KKLTQ +LA  +NEKP VI +YE+G+AIPNQQ+L KLERALGVKLR
Sbjct:   22 PRENVAKTSSQLNAARRAGLVVGTEKKY--GTANTKSNPEGQRLTKLDATDDVVAVKKVDVSVGKAIQQARQEKKLTQKELATKVNEKPNVINDYEAGRAIPNQQLLAKLERALGVKLR 138          
BLAST of CN182398 vs. ExPASy Swiss-Prot
Match: MBF1_YARLI (Putative multi-protein-binding factor 1 OS=Yarrowia lipolytica GN=MBF1 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.658e-20
Identity = 51/119 (42.86%), Postives = 76/119 (63.87%), Query Frame = -3
Query:  174 PNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 530
            P A   K +  +NAA R+G  + T +K  +  +K       L   K+D   + +A  +V + + KAI++ R++K LTQ +LA  INEKPQV+ +YESG+A PNQQ+L+K+ER LG+KLR
Sbjct:   22 PRATVAKTQAEINAAMRSGNVLSTDKKYASANSKDGGDGQRLT--KIDRSDDIIAPPKVEASVGKAIIKGRSEKGLTQKELAVKINEKPQVVNDYESGRAQPNQQVLSKMERVLGIKLR 138          
BLAST of CN182398 vs. ExPASy Swiss-Prot
Match: MBF1_DEBHA (Multiprotein-bridging factor 1 OS=Debaryomyces hansenii GN=MBF1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.227e-20
Identity = 55/119 (46.22%), Postives = 73/119 (61.34%), Query Frame = -3
Query:  174 PNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 530
            P     K +  +NAARR+G  + T +K   G+    S+       KLD   + +   ++   + KAI QAR +KKLTQ  LA  INEKP VI +YE+G+A+PNQQ+L KLERALGVKLR
Sbjct:   21 PRQNVAKTQAELNAARRSGNVVGTEKKY--GSTNTKSNPEGQRLTKLDAVDDVVPTKKLDMNVGKAIQQARQEKKLTQKDLATKINEKPNVINDYEAGRAVPNQQLLGKLERALGVKLR 137          
BLAST of CN182398 vs. ExPASy Swiss-Prot
Match: MBF1_YEAST (Multiprotein-bridging factor 1 OS=Saccharomyces cerevisiae GN=MBF1 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.833e-19
Identity = 52/119 (43.70%), Postives = 76/119 (63.87%), Query Frame = -3
Query:  174 PNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 530
            P A   + +  +NAARR G  + +V K +  TN    +     T K+D +T+ +   ++   + +AI +AR DKK++Q  LA  INEKP V+ +YE+ +AIPNQQ+L+KLERALGVKLR
Sbjct:   21 PRANVARSQGQINAARRQGL-VVSVDKKYGSTNTRGDNEGQRLT-KVDRETDIVKPKKLDPNVGRAISRARTDKKMSQKDLATKINEKPTVVNDYEAARAIPNQQVLSKLERALGVKLR 137          
BLAST of CN182398 vs. ExPASy Swiss-Prot
Match: MBF1_KLULA (Multiprotein-bridging factor 1 OS=Kluyveromyces lactis GN=MBF1 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.126e-19
Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = -3
Query:  174 PNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 530
            P     + +  +N ARR+G  +   +K   GT  + SS       K+D +T+ +   ++   + KAI + R DK LTQ  LA  INEKP ++ +YESG+ IPNQQIL K+ERALG+KLR
Sbjct:   21 PRQQVARTQGQINEARRSGMVLSVDKKY--GTTNSKSSPEGQRLTKVDRETDIVKPKKIDVSVGKAIQKGRQDKNLTQKDLATKINEKPTIVNDYESGRGIPNQQILGKMERALGIKLR 137          
BLAST of CN182398 vs. ExPASy Swiss-Prot
Match: MBF1_ASHGO (Multiprotein-bridging factor 1 OS=Ashbya gossypii GN=MBF1 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.126e-19
Identity = 53/119 (44.54%), Postives = 76/119 (63.87%), Query Frame = -3
Query:  174 PNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 530
            P     + +  +NAARRAG  + +V K +A +N  A++     T  +D +T+ +   ++   + +AI + R DK +TQ  LA  INEKP VI +YE+G+AIPNQQIL K+ERALGVKLR
Sbjct:   22 PRQQVARTQGQINAARRAGL-VLSVDKKYASSNTKANNEGQRLTM-VDRETDIVKPKKLDPSVGRAIAKGRGDKGMTQKDLATRINEKPTVINDYEAGRAIPNQQILAKMERALGVKLR 138          
BLAST of CN182398 vs. ExPASy Swiss-Prot
Match: MBF1_CANGA (Multiprotein-bridging factor 1 OS=Candida glabrata GN=MBF1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.188e-18
Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = -3
Query:  174 PNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 530
            P A   + +  +NAARR G  +   +K      K  +    L   K+D +T+ +   ++ + + K I + R +KK++Q  LA  INEKP VI +YE+G+AIPNQQ+L K+ERALGVKLR
Sbjct:   21 PRANVARTQGQINAARRQGLVLSVDKKYGTANTKGDAEGQRLT--KVDRETDIVKPKKLDANVGKTIARVRTEKKMSQKDLATKINEKPTVINDYEAGRAIPNQQVLGKMERALGVKLR 137          
BLAST of CN182398 vs. ExPASy Swiss-Prot
Match: MBF1_SCHPO (Multiprotein-bridging factor 1 OS=Schizosaccharomyces pombe GN=mbf1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.457e-18
Identity = 52/124 (41.94%), Postives = 72/124 (58.06%), Query Frame = -3
Query:  174 KKAPNAATK--KDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 539
            +  P A T   K +  +N+ARRAGA + T +K   G      +   L   K+D + E          + +AI + R  K   Q  L+Q INEKPQV+ +YESG+AIPNQQ+L+K+ERALG+KLR
Sbjct:   13 RAGPGARTHVAKTQSQINSARRAGAIVGTEKKYATGNKSQDPAGQHLT--KIDRENEVKPPSTTGRSVAQAIQKGRQAKGWAQKDLSQRINEKPQVVNDYESGRAIPNQQVLSKMERALGIKLR 134          
BLAST of CN182398 vs. ExPASy Swiss-Prot
Match: VSH7_DICDI (Vegetative-specific protein H7 OS=Dictyostelium discoideum GN=cinD-1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 3.577e-15
Identity = 47/99 (47.47%), Postives = 65/99 (65.66%), Query Frame = -3
Query:  174 DIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 470
            D++T  K  AG NK    +   N +K+ E  E++A   +   + +AI +ARN  K+TQ +LA  INE+P VI EYESG AIP+Q +L+KLE+AL VKLR
Sbjct:    2 DVQT--KYGAGQNKVLGGA---NQKKIVESEEDIALPELNPSVPQAIQRARNALKMTQKELAFKINERPGVINEYESGSAIPSQAVLSKLEKALNVKLR 95          
BLAST of CN182398 vs. ExPASy Swiss-Prot
Match: MBF1_CRYNE (Multiprotein-bridging factor 1 OS=Cryptococcus neoformans GN=MBF1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.170e-12
Identity = 46/114 (40.35%), Postives = 66/114 (57.89%), Query Frame = -3
Query:  174 VNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQAR------NDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 497
            +NAA+RAG  I +  K  AG +K  +    +   KLD D      ++V +++ KA+  AR        K +TQ +LA  +N KPQ I + ESG+A+P+Q +L KLER L VKLR
Sbjct:   25 LNAAQRAGLVISSESKG-AGQSKGPADHQRI--AKLDRDDAPKPPEKVSADVGKAVATARMAIKNAEGKSMTQKELATSVNAKPQDIADLESGRAVPDQALLGKLERKLNVKLR 135          
The following BLAST results are available for this feature:
BLAST of CN182398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
MBF1_CANAL8.790e-2249.58Multiprotein-bridging factor 1 OS=Candida albicans... [more]
MBF1_YARLI1.658e-2042.86Putative multi-protein-binding factor 1 OS=Yarrowi... [more]
MBF1_DEBHA8.227e-2046.22Multiprotein-bridging factor 1 OS=Debaryomyces han... [more]
MBF1_YEAST1.833e-1943.70Multiprotein-bridging factor 1 OS=Saccharomyces ce... [more]
MBF1_KLULA3.126e-1942.02Multiprotein-bridging factor 1 OS=Kluyveromyces la... [more]
MBF1_ASHGO3.126e-1944.54Multiprotein-bridging factor 1 OS=Ashbya gossypii ... [more]
MBF1_CANGA1.188e-1841.18Multiprotein-bridging factor 1 OS=Candida glabrata... [more]
MBF1_SCHPO3.457e-1841.94Multiprotein-bridging factor 1 OS=Schizosaccharomy... [more]
VSH7_DICDI3.577e-1547.47Vegetative-specific protein H7 OS=Dictyostelium di... [more]
MBF1_CRYNE2.170e-1240.35Multiprotein-bridging factor 1 OS=Cryptococcus neo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002G08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182398 ID=CN182398; Name=CN182398; organism=Citrus sinensis; type=EST; length=559bp
TAATAGATTCACAGTCATGACAAGAGTAACAGTCAAGGACACTAGTTATG
TGCCGAGCCATAACCATAGGAGAAAACATTCATATACAGCACCCATTTTG
AAGACTCAACAACAGGACACAACATCAAGTCCTGGTAGCAGTTTTTATTT
ATCCCTCCTCCTCACTTCTTTCCTCGAAGCTTCACACCAAGGGCCCTCTC
CAGCTTGGTAAGTATCTGCTGATTTGGAATGGCTTTTCCTGATTCATATT
CCTGAATCACCTGGGGCTTCTCATTGATCAACTGAGCAAGTTGAGACTGG
GTAAGTTTCTTATCATTTCGTGCCTGAACAATGGCTTTCTTGAGTTCACT
AGGCACTCGATCATGAGCAAGGTTCTCTGTATCTTCATCAAGCTTCCTGG
TGTTCAGAGAAGTGCTACTCGAGGCAGCCTTGTTTGTGCCAGCATGTGAT
TTTCTGACAGTCTCGATATCGGCACCGGCGCGGCGGGCAGCGTTAACGAC
CTTCTCGTCCTTCTTGGTGGCGGCGTTAGGGGCTTTCTTTCTTAATCACC
ACCGGCTCC
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