CN189031

Overview
NameCN189031
Unique NameCN189031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.243e-27
Identity = 67/166 (40.36%), Postives = 96/166 (57.83%), Query Frame = 3
Query:  204 AMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDY 686
            A +  W   H + Y  + E+  R  ++++N++ I+ HN E      ++ + +N F D+T+EE+R +  G +      + K ++   +   +    P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC     NEGCNGGLMDY
Sbjct:   27 AQWTKWKAMHNRLYG-MNEEGWRRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQ------NRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDY 185          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.243e-27
Identity = 71/163 (43.56%), Postives = 94/163 (57.67%), Query Frame = 3
Query:  210 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLM 680
            +E W   H K YN   ++  R  I+++NL++I  HN E      TY++ +N   D+T+EE      G +       L   RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M
Sbjct:   26 WELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLK-----VPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYM 182          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.623e-27
Identity = 66/158 (41.77%), Postives = 99/158 (62.66%), Query Frame = 3
Query:  210 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKG-AVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGL 677
            F +W+ +H K Y++  E   R ++F  N R I  HN  N T+K+GLN+F+D++  E +  +L +    +  +  + +SN YL   G   P S+DWRKKG  V+ VK+QG+CGSCW FST  A+E    I +G +++L+EQ+LVDC  ++ N GC GGL
Sbjct:   33 FTSWMKQHQKTYSSR-EYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWS----EPQNCSATKSN-YLRGTGP-YPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGL 183          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.120e-27
Identity = 69/168 (41.07%), Postives = 94/168 (55.95%), Query Frame = 3
Query:  189 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLM 680
            ++ +   +E W   HGK YN+  ++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G R    R+         Y P     +PDS+D+RKKG V  VK+QG CGSCWAFS+  A+EG  K  TG L++LS Q LVDC  S N GC GG M
Sbjct:   19 EETLDTQWELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVPPSRSF---SNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDC-VSENYGCGGGYM 182          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.617e-27
Identity = 67/166 (40.36%), Postives = 93/166 (56.02%), Query Frame = 3
Query:  210 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVG-EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLM 680
            F +++ + GK+Y    E   R  +FK+NLR    H   + + + G+ +F+DLT  E+R  +LG R   +    +   S    P +  + LPD  DWR  GAV  VK+QGSCGSCW+FS   A+EG + + TG L  LSEQ+ VDCD         S + GCNGGLM
Sbjct:   48 FLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLM 213          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.374e-26
Identity = 58/163 (35.58%), Postives = 96/163 (58.90%), Query Frame = 3
Query:  189 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGG 674
            +++   +F+ +  ++ K Y++  E ++RF  FK   + I  HN++  +YK+G+N +ADL+N+E+ ++          T   S   +  L     ++P +VDWR +  V  VKDQG CGSCW F +  ++EG N +  G L+SLSEQ+LVDC   + ++GC GG
Sbjct:  218 EEQASNLFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTLVKPKVARPSVTGADSVHDDESL----RSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGG 376          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.374e-26
Identity = 68/161 (42.24%), Postives = 90/161 (55.90%), Query Frame = 3
Query:  210 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLM 680
            +E W   H K YN+  ++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G R    R+         Y P     +PDS+D+RKKG V  VK+QG CGSCWAFS+  A+EG  K  TG L++LS Q LVDC T  N GC GG M
Sbjct:   26 WELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIPPSRSY---SNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE-NYGCGGGYM 182          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.374e-26
Identity = 65/158 (41.14%), Postives = 98/158 (62.03%), Query Frame = 3
Query:  210 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKG-AVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGL 677
            F++W+ +H K Y+++ E   R ++F  N R I  HN  N T+K+ LN+F+D++  E +   L +    +  +  + +SN YL   G   P S+DWRKKG  V+ VK+QG+C SCW FST  A+E    I +G ++SL+EQ+LVDC  ++ N GC GGL
Sbjct:   33 FKSWMKQHQKTYSSV-EYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWS----EPQNCSATKSN-YLRGTGP-YPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGL 183          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.062e-26
Identity = 68/148 (45.95%), Postives = 85/148 (57.43%), Query Frame = 3
Query:  258 EKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLM 680
            E++ R  I+++NL+FI  HN E+     +Y VG+N   D+T EE          G+ R      RS        + LPDSVDWR+KG V  VK QGSCGSCWAFS   A+EG  K+ TG L+SLS Q LVDC T     N+GC GG M
Sbjct:   42 EEDVRRLIWEKNLKFIMLHNLEHSMGMHSYSVGMNHMGDMTPEEVIGY-----MGSLRIPRPWNRSGTLKSSSNQTLPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFM 184          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.062e-26
Identity = 70/176 (39.77%), Postives = 100/176 (56.82%), Query Frame = 3
Query:  171 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLM 680
            SS+   ++ +   +E W   + K YN+  ++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G +     +     RSN   Y+P      PDS+D+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M
Sbjct:   14 SSALYPEEILDTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHS-----RSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYM 183          
The following BLAST results are available for this feature:
BLAST of CN189031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATL1_CERAE1.243e-2740.36Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATK_HUMAN1.243e-2743.56Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATH_RAT1.623e-2741.77Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATK_RAT2.120e-2741.07Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CYSP1_MAIZE3.617e-2740.36Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CFAD_DICDI1.374e-2635.58Counting factor associated protein D OS=Dictyostel... [more]
CATK_MOUSE1.374e-2642.24Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATH_MOUSE1.374e-2641.14Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATS_RAT3.062e-2645.95Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATK_PIG3.062e-2639.77Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001D08_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189031 ID=CN189031; Name=CN189031; organism=Citrus sinensis; type=EST; length=688bp
GCGTTTTAAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAACCCTTCTTT
TCTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGTTTTTACT
TTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCTTATG
ATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTT
ATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATAACGC
TTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTAGGT
TTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAAC
CGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGGGTGC
ACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACCGTT
ATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAG
AAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTG
GGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAG
GTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCA
TATAATGAAGGATGTAATGGTGGTTTGATGGACTATGC
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