CN189031

Overview
NameCN189031
Unique NameCN189031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.194e-24
Identity = 61/156 (39.10%), Postives = 90/156 (57.69%), Query Frame = 3
Query:  228 KHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLM 680
            ++G+ Y    E+  R  +F++N + I++ N +      T+KV +N+F D+TNEE+ ++  G + G++      +    +    G    D VDWR K  V  VKDQ  CGSCWAFS   A+EG + +    L+SLSEQ+LVDC T Y N+GC GG M
Sbjct:   26 QYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSR-----GEPKAVFTAEAGPMAAD-VDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWM 175          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.194e-24
Identity = 52/70 (74.29%), Postives = 60/70 (85.71%), Query Frame = 3
Query:  474 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMD 683
            LPDS+DWR+ GAV  VK+QG CGSCWAFST+AAVEGIN+IVTG LISLSEQ+LVDC T+ N GC GG M+
Sbjct:    3 LPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA-NHGCRGGWMN 71          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.194e-24
Identity = 61/165 (36.97%), Postives = 93/165 (56.36%), Query Frame = 3
Query:  210 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYL--------PRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLM 680
            FE +++ + K Y     K  RF+IFK+NL  I+E N  N +    +N+F+DL+  E  + + G    +K+ S   + ++ +         P V + LP + DWR    +  VKDQG+CGSCWA + +  +E +  I    LI+LSEQ+L+DCD S N  C+GGLM
Sbjct:   32 FETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLT--SKKPSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD-SANMACDGGLM 193          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.384e-24
Identity = 62/162 (38.27%), Postives = 96/162 (59.26%), Query Frame = 3
Query:  195 EVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGL 677
            ++ ++F+ +++ + + Y +  E   R  +F  N+    +  + +R T + G+ +F+DLT EE+R+++L      K    K K++      VG+  P   DWR KGAV +VKDQG CGSCWAFS    VEG   +  G+L+SLSEQEL+DCD   ++ C GGL
Sbjct:  182 KMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLL-RKEPGNKMKQAKS----VGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD-KMDKACMGGL 337          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.338e-24
Identity = 63/164 (38.41%), Postives = 92/164 (56.10%), Query Frame = 3
Query:  207 MFEAWLVKHGKAYNALGEKEKRFEIFKENLRFID--EHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDW--RKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMD 683
            ++  W +K+ + Y +  ++  RF++F +NL +I   + ++E+ TY + LN+FAD++ +E+ S +L  R   K   L +  +N             VDW   KK     VK+QGSCGSCWAFS + A+E    I       LSEQ+LVDC   Y NEGCNGG MD
Sbjct:   25 LYANWKMKYNRRYTSQRDEMYRFKVFSDNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSLRV-PKTAKLNASNANFQYKGA------EVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMD 181          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.089e-23
Identity = 51/69 (73.91%), Postives = 57/69 (82.61%), Query Frame = 3
Query:  468 EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGG 674
            + LPDS+DWR+KGAV  VK+QG CGSCWAF  IAAVEGIN+IVTG LISLSEQ+LVDC T  N GC GG
Sbjct:    1 DVLPDSIDWREKGAVVPVKNQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDCSTR-NHGCEGG 68          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.422e-23
Identity = 65/167 (38.92%), Postives = 93/167 (55.69%), Query Frame = 3
Query:  189 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGG 674
            D  + A ++ W  K+ K+Y+ + E+ KR  +++ENL+ I  HN EN   K G    +N FAD T EE+R         A  T+  +++      +V   LP+  DWRK+G V  V++QG CGSCWAF+ + A+EG     TG+L  LS Q L+DC  S  N GC  G
Sbjct:   22 DPNLDAEWQDWKTKYAKSYSPVEEELKR-AVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIPAAVTNPSAQK------QVSIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDCSKSEGNNGCRWG 181          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.857e-23
Identity = 64/202 (31.68%), Postives = 107/202 (52.97%), Query Frame = 3
Query:   90 MFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGA---RFGAKRTSLKSKRSNRYLPRVGEAL--PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLM 680
            M+L++ +T+ +    SI +    ++  S+S          +E ++ +H K Y    +++  F  FK NL  ++  N+ +     G+N+F+D+    + + H G       +  ++    R   Y+   G +   P+S DWRK   V +VK+QG CGSCWAF+ I  +E    I+  SLI LSEQ+L+DCD   ++GC+GGLM
Sbjct:    1 MYLIYYYTIIAVATASIANEKIFYDIDSAS--------VYYENFIKQHNKEYTTPDQRDAAFVNFKRNLADMNAMNNVSNQAVYGINKFSDIDKITFVNEHAGLVSNLINSTDSNFDPYRLCEYVTVAGPSARTPESFDWRKLNKVTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCD-RVDQGCDGGLM 193          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.168e-23
Identity = 70/175 (40.00%), Postives = 96/175 (54.86%), Query Frame = 3
Query:  195 EVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHN----SENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLP-RVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD---------TSYNEGCNGGL 677
            E  + F  +  K  K Y+   E  +RFEIFK NL  I+E N    +     K G+N+FADL+++E+++ +L  +       L       YL      ++P + DWR +GAV  VK+QG CGSCW+FST   VEG + I    L+SLSEQ LVDCD          + +EGCNGGL
Sbjct:   24 EEQSQFLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVAD---YLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGL 194          
BLAST of CN189031 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.138e-23
Identity = 71/165 (43.03%), Postives = 94/165 (56.97%), Query Frame = 3
Query:  192 DEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKV-GLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGL 677
            DE    F+   +K+ K Y+   E E RF IFK N+     +    R   + G+  ++DLT +E+   HL A +      + S RSN    L +    +P + DWR+KGAV EVK+QG CGSCWAFST   VE      TG L+SLSEQ+LVDCD   ++GCNGGL
Sbjct:   17 DEKYVQFK---LKYRKQYHET-EDEIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTTDEFARTHLTASW-----VVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD-GLDDGCNGGL 171          
The following BLAST results are available for this feature:
BLAST of CN189031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CYSP3_HOMAM2.194e-2439.10Digestive cysteine proteinase 3 OS=Homarus america... [more]
CPGP2_ZINOF2.194e-2474.29Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CATV_NPVAH2.194e-2436.97Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATF_HUMAN6.384e-2438.27Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATL2_PARTE8.338e-2438.41Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CPGP1_ZINOF1.089e-2373.91Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CATJ_RAT1.422e-2338.92Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATV_NPVST1.857e-2331.68Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CYSP1_DICDI3.168e-2340.00Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATL_SCHMA4.138e-2343.03Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001D08_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189031 ID=CN189031; Name=CN189031; organism=Citrus sinensis; type=EST; length=688bp
GCGTTTTAAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAACCCTTCTTT
TCTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGTTTTTACT
TTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCTTATG
ATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTT
ATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATAACGC
TTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTAGGT
TTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAAC
CGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGGGTGC
ACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACCGTT
ATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAG
AAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTG
GGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAG
GTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCA
TATAATGAAGGATGTAATGGTGGTTTGATGGACTATGC
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