CN189027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLLC (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.560e-60 Identity = 112/124 (90.32%), Postives = 119/124 (95.97%), Query Frame = -3 Query: 248 KGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 619 KGRPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN DVPHVNRTDYQLIDISEDGFVSLLT+NGNTKDDLRLPTDE LL+ +KDGFAEGKDLV++VMS+MGEEQI ALKDIGPK Sbjct: 36 KGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDENLLSLIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLLC (Eukaryotic translation initiation factor 5A-4 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 3.474e-60 Identity = 111/125 (88.80%), Postives = 118/125 (94.40%), Query Frame = -3 Query: 245 KGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPKS 619 KGRPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHN DVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+TLL Q+K GF EGKDLVL+VMS+MGEEQICA+KDIG K+ Sbjct: 36 KGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLNQVKGGFEEGKDLVLSVMSAMGEEQICAVKDIGTKT 160
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLTU (Eukaryotic translation initiation factor 5A-3 OS=Solanum tuberosum GN=EIF5A3 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 2.941e-59 Identity = 110/125 (88.00%), Postives = 119/125 (95.20%), Query Frame = -3 Query: 245 KGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPKS 619 KGRPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN DVPHVNRTDYQLIDISEDGFVSLLTE+GNTKDDLRLPTDE+LL Q+KDGF EGKDLV++VMS+MGEEQI A+KDIG K+ Sbjct: 36 KGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDESLLKQVKDGFQEGKDLVVSVMSAMGEEQINAIKDIGTKN 160
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: IF5A_MAIZE (Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 6.552e-59 Identity = 106/124 (85.48%), Postives = 116/124 (93.55%), Query Frame = -3 Query: 248 KGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 619 K RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN D+PHVNRT+YQLIDISEDGFVSLLT +GNTKDDLRLPTDETL+ Q+K+GF GKDLV+TV S+MGEEQICALKD+GPK Sbjct: 37 KNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDIPHVNRTEYQLIDISEDGFVSLLTSDGNTKDDLRLPTDETLVAQIKEGFESGKDLVVTVQSAMGEEQICALKDVGPK 160
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: IF5A3_ARATH (Eukaryotic translation initiation factor 5A-3 OS=Arabidopsis thaliana GN=At1g69410 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 6.552e-59 Identity = 106/124 (85.48%), Postives = 118/124 (95.16%), Query Frame = -3 Query: 248 KGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 619 KGRPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHN DVPHVNR DYQLIDISEDGFVSLLT+NG+TKDDL+LPTDE LLTQLK+GF EGKD+V++VMS+MGEEQ+CALK++GPK Sbjct: 35 KGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDEALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: IF5A2_SOLLC (Eukaryotic translation initiation factor 5A-2 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 6.552e-59 Identity = 109/125 (87.20%), Postives = 118/125 (94.40%), Query Frame = -3 Query: 245 KGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPKS 619 KGRPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN DVPHVNRTDYQLIDISEDGFVSLLTE+GNTKDDLRLPTDE LL Q+KDGF EGKDLV++VMS+MGEEQI A+KD+G K+ Sbjct: 36 KGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDENLLKQVKDGFQEGKDLVVSVMSAMGEEQINAVKDVGTKN 160
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: IF5A1_MEDSA (Eukaryotic translation initiation factor 5A-1 OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.118e-58 Identity = 109/126 (86.51%), Postives = 120/126 (95.24%), Query Frame = -3 Query: 245 KGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDI-VPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPKS 619 K RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLE++ VPSSHN DVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDL+LPTD++LLTQ+KDGFAEGKDLV++VMS+MGEEQICALKDIG K+ Sbjct: 36 KNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEEVYVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGGKN 161
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: IF5A1_ARATH (Eukaryotic translation initiation factor 5A-1 OS=Arabidopsis thaliana GN=At1g13950 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.330e-56 Identity = 104/124 (83.87%), Postives = 115/124 (92.74%), Query Frame = -3 Query: 248 KGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 619 K RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHN DVPHVNRTDYQLIDISEDG+VSLLT+NG+TKDDL+LP D+TLL Q+K GF +GKDLV++VMS+MGEEQI ALKDIGPK Sbjct: 35 KNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPNDDTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: IF5A_DIACA (Eukaryotic translation initiation factor 5A OS=Dianthus caryophyllus PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.414e-53 Identity = 96/121 (79.34%), Postives = 111/121 (91.74%), Query Frame = -3 Query: 257 KGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDI 619 K RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN DVPHVNR DYQL+DI+EDGFVSLLT++G+TKDDL+LP DE L+ Q+K+GF GKDL+L+VM +MGEEQICA+KD+ Sbjct: 36 KNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRVDYQLLDITEDGFVSLLTDSGDTKDDLKLPADEALVKQMKEGFEAGKDLILSVMCAMGEEQICAVKDV 156
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: IF5A2_ARATH (Eukaryotic translation initiation factor 5A-2 OS=Arabidopsis thaliana GN=At1g26630 PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 4.114e-53 Identity = 97/122 (79.51%), Postives = 111/122 (90.98%), Query Frame = -3 Query: 254 KGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIG 619 K RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHN DVPHVNR DYQLIDI+EDGFVSLLT++G TKDDL+LPTD+ L Q++ GF EGKD+V++VMSSMGEEQICA+K++G Sbjct: 35 KNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTDDGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156 The following BLAST results are available for this feature:
BLAST of CN189027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189027 ID=CN189027; Name=CN189027; organism=Citrus sinensis; type=EST; length=621bpback to top |