CN189021

Overview
NameCN189021
Unique NameCN189021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_PSE14 (Peptide methionine sulfoxide reductase msrA OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=msrA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 2
Query:  515 QFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            +FA FG GCFWG E    +  GV  T VGY+ G+  NP+YE+VCSG T H EVV V Y+P++ S+ +LL   W
Sbjct:   50 EFAIFGLGCFWGAERRLWQQEGVVSTVVGYAGGFTPNPTYEEVCSGLTAHTEVVLVVYEPEKISYKSLLKVFW 122          
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_METNO (Peptide methionine sulfoxide reductase msrA OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=msrA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 44/99 (44.44%), Postives = 53/99 (53.54%), Query Frame = 2
Query:  443 PDPASTENSAIAQGPDDDVPAP-GQQFAQFGAGCFWGVELAFQRV-PGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            P P  T       G     P P G + A FG GCFWG E  F ++  G+  T VGY+ G   NP+YE+VC+G T HNEVV V YDP    F+ LL   W
Sbjct:   21 PTPLPTAERHFVNGRPLKGPYPEGIETALFGLGCFWGAERKFWQLGDGIWVTAVGYAAGTTPNPTYEEVCTGLTGHNEVVLVAYDPAAMPFERLLKTFW 119          
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_METCA (Peptide methionine sulfoxide reductase msrA OS=Methylococcus capsulatus GN=msrA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 38/75 (50.67%), Postives = 46/75 (61.33%), Query Frame = 2
Query:  509 GQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            G   A FG GCFWG E  F  +PGV  T VGY+ G   NP+Y++VC+G T H EVV V Y+P +  FD LL   W
Sbjct:   44 GTARAFFGMGCFWGAERRFWTLPGVYSTAVGYAGGSTPNPTYDEVCTGRTGHAEVVLVVYEPDKVGFDALLQVFW 118          
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_PECCP (Peptide methionine sulfoxide reductase msrA OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=msrA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.758e-15
Identity = 37/71 (52.11%), Postives = 44/71 (61.97%), Query Frame = 2
Query:  521 AQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            A F  GCFWGVE  F + PG+  T  GY  GY  NP+Y +VCSG T+H E VRV +DP   S+D LL   W
Sbjct:   46 AIFAMGCFWGVERLFWQQPGIYSTAAGYIGGYTPNPTYREVCSGQTDHAEAVRVVFDPAVISYDQLLQLFW 116          
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_MAGSA (Peptide methionine sulfoxide reductase msrA OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=msrA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.758e-15
Identity = 37/75 (49.33%), Postives = 45/75 (60.00%), Query Frame = 2
Query:  509 GQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            G + A FG GCFWG E  F +  GV  T VGY+ G+  NP+YE+VCS  T H E V V +DP E S+  LL   W
Sbjct:   45 GMEVACFGMGCFWGAERLFWKTGGVYSTSVGYTGGFTLNPTYEEVCSAQTGHTEAVLVAFDPAEVSYTALLRLFW 119          
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_XYLFT (Peptide methionine sulfoxide reductase msrA OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=msrA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15
Identity = 38/76 (50.00%), Postives = 45/76 (59.21%), Query Frame = 2
Query:  506 PGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            PG    QFG GCFWG E  F ++PGV  T  GY+ G +  P+Y +VCSG T H EVV V YD    SF+ LL   W
Sbjct:   43 PGLALIQFGLGCFWGAERLFWQLPGVFSTAAGYAGGGVPYPTYREVCSGETGHAEVVLVVYDHTVISFEQLLQTFW 118          
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_XYLF2 (Peptide methionine sulfoxide reductase msrA OS=Xylella fastidiosa (strain M23) GN=msrA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15
Identity = 38/76 (50.00%), Postives = 45/76 (59.21%), Query Frame = 2
Query:  506 PGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            PG    QFG GCFWG E  F ++PGV  T  GY+ G +  P+Y +VCSG T H EVV V YD    SF+ LL   W
Sbjct:   43 PGLALIQFGLGCFWGAERLFWQLPGVFSTAAGYAGGGVPYPTYREVCSGETGHAEVVLVVYDHTVISFEQLLQTFW 118          
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_PSEU2 (Peptide methionine sulfoxide reductase msrA OS=Pseudomonas syringae pv. syringae (strain B728a) GN=msrA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 2
Query:  515 QFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            +FA FG GCFWG E    +  GV  T  GY+ G+  NP+YE+VCSG T H EVV V Y+P + S++ LL   W
Sbjct:   50 EFAIFGMGCFWGAERRLWQQEGVVSTVAGYAGGFTPNPTYEEVCSGLTGHTEVVLVVYEPAKISYEELLKVFW 122          
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_MYCGE (Peptide methionine sulfoxide reductase msrA OS=Mycoplasma genitalium GN=msrA PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 2
Query:  527 FGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLD 724
            FG GCFWG+E  FQ + GV KT VGY    + NPSYE VCSG TN  E V+V+Y+ KE S   L++
Sbjct:    6 FGGGCFWGIEKYFQLIKGVKKTSVGYLNSRIRNPSYEQVCSGYTNAVEAVKVEYEEKEISLSELIE 71          
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_METS4 (Peptide methionine sulfoxide reductase msrA OS=Methylobacterium sp. (strain 4-46) GN=msrA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 45/104 (43.27%), Postives = 57/104 (54.81%), Query Frame = 2
Query:  434 RPSPDPASTE---NSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRV-PGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            RP+P P +     N    +GP  +    G + A FG GCFWG E  F ++  G+  T VGY+ G   NP+YE+VC+G T HNEVV V YDP    F  LL   W
Sbjct:   20 RPTPLPTAERHFVNGRALKGPYPE----GIETALFGLGCFWGAERKFWQLGDGIWVTAVGYAAGTTPNPTYEEVCTGLTGHNEVVLVAYDPAVLPFGQLLRTFW 119          
The following BLAST results are available for this feature:
BLAST of CN189021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
MSRA_PSE142.112e-1550.68Peptide methionine sulfoxide reductase msrA OS=Pse... [more]
MSRA_METNO2.112e-1544.44Peptide methionine sulfoxide reductase msrA OS=Met... [more]
MSRA_METCA2.112e-1550.67Peptide methionine sulfoxide reductase msrA OS=Met... [more]
MSRA_PECCP2.758e-1552.11Peptide methionine sulfoxide reductase msrA OS=Pec... [more]
MSRA_MAGSA2.758e-1549.33Peptide methionine sulfoxide reductase msrA OS=Mag... [more]
MSRA_XYLFT3.602e-1550.00Peptide methionine sulfoxide reductase msrA OS=Xyl... [more]
MSRA_XYLF23.602e-1550.00Peptide methionine sulfoxide reductase msrA OS=Xyl... [more]
MSRA_PSEU24.705e-1549.32Peptide methionine sulfoxide reductase msrA OS=Pse... [more]
MSRA_MYCGE4.705e-1554.55Peptide methionine sulfoxide reductase msrA OS=Myc... [more]
MSRA_METS44.705e-1543.27Peptide methionine sulfoxide reductase msrA OS=Met... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001D03_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189021 ID=CN189021; Name=CN189021; organism=Citrus sinensis; type=EST; length=738bp
CTTGAAGGTGTAACGTTAAATTTGCTGACACTATGGAGATTGATAGGGAA
TTTTATTTTAAGTTATTTTGGAAAAATGGAAAGAGGATGAGGAAATAATA
ATATTTTAATTTAAAGTAACTTGAAAAAAAATTCAATCCAATCTCGATTG
AGCAAATCGACACGAGGTAACTGAATTTTCTCAACACGTCTCCAAATCTT
TAAAACCAGCAATGGTCTTAAACAAGTGTCTTTCCATAACCACCACCACC
ACCACCGTCGCCGCTACCATCTCCAAATCGCCACTTCTTCTAATCTCCTC
TTCTCTCTCTTCACCAAAGAACCCTCTTTCTCTCTCTAAACCCAATCCGA
CCCATTTCCCTATCACTGCCCGACCCATTTCCACCCACTACAAGCCCCCC
ATGAACATCCTCAACAAGCTCGGCTTCGGCTTCAGGCCCAGCCCCGACCC
CGCGTCCACGGAGAACTCCGCCATCGCTCAGGGCCCCGACGACGACGTTC
CGGCCCCCGGTCAGCAGTTTGCCCAGTTCGGCGCTGGCTGCTTTTGGGGC
GTCGAATTGGCGTTCCAGAGAGTGCCAGGTGTCACCAAGACCGAAGTTGG
GTACAGCCAAGGCTACTTGCATAACCCTAGCTACGAGGACGTGTGCAGTG
GGACTACCAATCATAATGAAGTTGTTAGGGTTCAGTATGATCCTAAAGAG
TGTAGTTTCGATACTTTGCTTGATAATGTTTGGGCTCG
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