CN189021

Overview
NameCN189021
Unique NameCN189021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_SALHS (Peptide methionine sulfoxide reductase msrA OS=Salmonella heidelberg (strain SL476) GN=msrA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 2 
Query:  434 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            R +P P +T + A+ +    +VPA G + A F  GCFWGVE  F ++PGV  T  GY+ GY  NP+Y +VCSG T H E VR+ YDP    ++ LL   W
Sbjct:   19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_SALG2 (Peptide methionine sulfoxide reductase msrA OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=msrA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 2 
Query:  434 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            R +P P +T + A+ +    +VPA G + A F  GCFWGVE  F ++PGV  T  GY+ GY  NP+Y +VCSG T H E VR+ YDP    ++ LL   W
Sbjct:   19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_SALEP (Peptide methionine sulfoxide reductase msrA OS=Salmonella enteritidis PT4 (strain P125109) GN=msrA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 2 
Query:  434 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            R +P P +T + A+ +    +VPA G + A F  GCFWGVE  F ++PGV  T  GY+ GY  NP+Y +VCSG T H E VR+ YDP    ++ LL   W
Sbjct:   19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_SALDC (Peptide methionine sulfoxide reductase msrA OS=Salmonella dublin (strain CT_02021853) GN=msrA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 2 
Query:  434 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            R +P P +T + A+ +    +VPA G + A F  GCFWGVE  F ++PGV  T  GY+ GY  NP+Y +VCSG T H E VR+ YDP    ++ LL   W
Sbjct:   19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_SALCH (Peptide methionine sulfoxide reductase msrA OS=Salmonella choleraesuis GN=msrA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 2 
Query:  434 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            R +P P +T + A+ +    +VPA G + A F  GCFWGVE  F ++PGV  T  GY+ GY  NP+Y +VCSG T H E VR+ YDP    ++ LL   W
Sbjct:   19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_SALA4 (Peptide methionine sulfoxide reductase msrA OS=Salmonella agona (strain SL483) GN=msrA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 2 
Query:  434 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            R +P P +T + A+ +    +VPA G + A F  GCFWGVE  F ++PGV  T  GY+ GY  NP+Y +VCSG T H E VR+ YDP    ++ LL   W
Sbjct:   19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_KLEP3 (Peptide methionine sulfoxide reductase msrA OS=Klebsiella pneumoniae (strain 342) GN=msrA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 47/100 (47.00%), Postives = 61/100 (61.00%), Query Frame = 2 
Query:  434 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            R +P P +T + A+      +VPA G + A F  GCFWGVE  F ++PGV  T  GY+ GY  NP+Y +VCSG T H E VRV YDP+  S++ LL   W
Sbjct:   19 RNTPMPVATLH-AVNGHSMTNVPA-GMEVALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGQTGHAEAVRVVYDPQVISYEQLLQVFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_SALTO (Peptide methionine sulfoxide reductase msrA OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=msrA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.755e-18
Identity = 44/100 (44.00%), Postives = 56/100 (56.00%), Query Frame = 2 
Query:  434 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            RP   P +  +  +        P  G   A FG GCFWG E  F  +PGV  T VGY+ GY  NPSY++VCSG T H EVV V+YDP + +++ LL   W
Sbjct:   20 RPVATPVTEPHEVLGTPLTGPFPE-GTAVAVFGMGCFWGAERLFWTLPGVLTTSVGYAGGYTPNPSYDEVCSGRTGHAEVVHVRYDPTKITYEDLLKVFW 118
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_SALSV (Peptide methionine sulfoxide reductase msrA OS=Salmonella schwarzengrund (strain CVM19633) GN=msrA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 2 
Query:  434 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            R +P P +T + A+ +    +VPA G + A F  GCFWGVE  F ++PGV  T  GY+ GY  NP+Y +VCSG T H E VR+ YDP    ++ LL   W
Sbjct:   19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQIFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_SACD2 (Peptide methionine sulfoxide reductase msrA OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=msrA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 46/96 (47.92%), Postives = 54/96 (56.25%), Query Frame = 2 
Query:  449 PASTENSAIAQGPDDDVPAPGQ-QFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            P  T       G     P P   Q   FG GCFWG E  F ++PGV  T VGYS G+  NP+YE+VCSG+T HNEVV V Y+P + SF  LL   W
Sbjct:   26 PIETAAEHFVSGMPLAPPYPSNMQQCVFGLGCFWGAERKFWQLPGVYVTAVGYSAGFTPNPTYEEVCSGSTGHNEVVLVVYNPSQVSFKKLLAVFW 121
The following BLAST results are available for this feature:
BLAST of CN189021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
MSRA_SALHS5.938e-1845.00Peptide methionine sulfoxide reductase msrA OS=Sal... [more]
MSRA_SALG25.938e-1845.00Peptide methionine sulfoxide reductase msrA OS=Sal... [more]
MSRA_SALEP5.938e-1845.00Peptide methionine sulfoxide reductase msrA OS=Sal... [more]
MSRA_SALDC5.938e-1845.00Peptide methionine sulfoxide reductase msrA OS=Sal... [more]
MSRA_SALCH5.938e-1845.00Peptide methionine sulfoxide reductase msrA OS=Sal... [more]
MSRA_SALA45.938e-1845.00Peptide methionine sulfoxide reductase msrA OS=Sal... [more]
MSRA_KLEP35.938e-1847.00Peptide methionine sulfoxide reductase msrA OS=Kle... [more]
MSRA_SALTO7.755e-1844.00Peptide methionine sulfoxide reductase msrA OS=Sal... [more]
MSRA_SALSV1.323e-1745.00Peptide methionine sulfoxide reductase msrA OS=Sal... [more]
MSRA_SACD21.323e-1747.92Peptide methionine sulfoxide reductase msrA OS=Sac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001D03_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189021 ID=CN189021; Name=CN189021; organism=Citrus sinensis; type=EST; length=738bp
CTTGAAGGTGTAACGTTAAATTTGCTGACACTATGGAGATTGATAGGGAA
TTTTATTTTAAGTTATTTTGGAAAAATGGAAAGAGGATGAGGAAATAATA
ATATTTTAATTTAAAGTAACTTGAAAAAAAATTCAATCCAATCTCGATTG
AGCAAATCGACACGAGGTAACTGAATTTTCTCAACACGTCTCCAAATCTT
TAAAACCAGCAATGGTCTTAAACAAGTGTCTTTCCATAACCACCACCACC
ACCACCGTCGCCGCTACCATCTCCAAATCGCCACTTCTTCTAATCTCCTC
TTCTCTCTCTTCACCAAAGAACCCTCTTTCTCTCTCTAAACCCAATCCGA
CCCATTTCCCTATCACTGCCCGACCCATTTCCACCCACTACAAGCCCCCC
ATGAACATCCTCAACAAGCTCGGCTTCGGCTTCAGGCCCAGCCCCGACCC
CGCGTCCACGGAGAACTCCGCCATCGCTCAGGGCCCCGACGACGACGTTC
CGGCCCCCGGTCAGCAGTTTGCCCAGTTCGGCGCTGGCTGCTTTTGGGGC
GTCGAATTGGCGTTCCAGAGAGTGCCAGGTGTCACCAAGACCGAAGTTGG
GTACAGCCAAGGCTACTTGCATAACCCTAGCTACGAGGACGTGTGCAGTG
GGACTACCAATCATAATGAAGTTGTTAGGGTTCAGTATGATCCTAAAGAG
TGTAGTTTCGATACTTTGCTTGATAATGTTTGGGCTCG
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