CN189021

Overview
NameCN189021
Unique NameCN189021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_FRASN (Peptide methionine sulfoxide reductase msrA OS=Frankia sp. (strain EAN1pec) GN=msrA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.238e-15
Identity = 39/75 (52.00%), Postives = 46/75 (61.33%), Query Frame = 2 
Query:  509 GQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            G + A FG GCFWG E  F +VPGV  T VGY+ G   NP+YE+ CSG T H E V V +DP + SF  LL   W
Sbjct:   45 GLRTAVFGMGCFWGAERKFWQVPGVYSTAVGYAGGITPNPTYEEACSGLTGHTEAVLVVFDPAKVSFAELLRVFW 119
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_YERPY (Peptide methionine sulfoxide reductase msrA OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=msrA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 38/75 (50.67%), Postives = 44/75 (58.67%), Query Frame = 2 
Query:  509 GQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            G   A F  GCFWG E  F + PGV  T  GYS G+  NP+Y +VCSG T H EVVRV +DP   S+  LL   W
Sbjct:   42 GMDLAFFAMGCFWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_YERPS (Peptide methionine sulfoxide reductase msrA OS=Yersinia pseudotuberculosis GN=msrA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 38/75 (50.67%), Postives = 44/75 (58.67%), Query Frame = 2 
Query:  509 GQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            G   A F  GCFWG E  F + PGV  T  GYS G+  NP+Y +VCSG T H EVVRV +DP   S+  LL   W
Sbjct:   42 GMDLAFFAMGCFWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_YERPP (Peptide methionine sulfoxide reductase msrA OS=Yersinia pestis (strain Pestoides F) GN=msrA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 38/75 (50.67%), Postives = 44/75 (58.67%), Query Frame = 2 
Query:  509 GQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            G   A F  GCFWG E  F + PGV  T  GYS G+  NP+Y +VCSG T H EVVRV +DP   S+  LL   W
Sbjct:   42 GMDLAFFAMGCFWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_YERPN (Peptide methionine sulfoxide reductase msrA OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=msrA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 38/75 (50.67%), Postives = 44/75 (58.67%), Query Frame = 2 
Query:  509 GQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            G   A F  GCFWG E  F + PGV  T  GYS G+  NP+Y +VCSG T H EVVRV +DP   S+  LL   W
Sbjct:   42 GMDLAFFAMGCFWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_YERPG (Peptide methionine sulfoxide reductase msrA OS=Yersinia pestis bv. Antiqua (strain Angola) GN=msrA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 38/75 (50.67%), Postives = 44/75 (58.67%), Query Frame = 2 
Query:  509 GQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            G   A F  GCFWG E  F + PGV  T  GYS G+  NP+Y +VCSG T H EVVRV +DP   S+  LL   W
Sbjct:   42 GMDLAFFAMGCFWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_YERPE (Peptide methionine sulfoxide reductase msrA OS=Yersinia pestis GN=msrA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 38/75 (50.67%), Postives = 44/75 (58.67%), Query Frame = 2 
Query:  509 GQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            G   A F  GCFWG E  F + PGV  T  GYS G+  NP+Y +VCSG T H EVVRV +DP   S+  LL   W
Sbjct:   42 GMDLAFFAMGCFWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_YERPB (Peptide methionine sulfoxide reductase msrA OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=msrA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 38/75 (50.67%), Postives = 44/75 (58.67%), Query Frame = 2 
Query:  509 GQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            G   A F  GCFWG E  F + PGV  T  GYS G+  NP+Y +VCSG T H EVVRV +DP   S+  LL   W
Sbjct:   42 GMDLAFFAMGCFWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_YERPA (Peptide methionine sulfoxide reductase msrA OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=msrA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 38/75 (50.67%), Postives = 44/75 (58.67%), Query Frame = 2 
Query:  509 GQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            G   A F  GCFWG E  F + PGV  T  GYS G+  NP+Y +VCSG T H EVVRV +DP   S+  LL   W
Sbjct:   42 GMDLAFFAMGCFWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFW 116
[Close]
BLAST of CN189021 vs. ExPASy Swiss-Prot
Match: MSRA_YERP3 (Peptide methionine sulfoxide reductase msrA OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=msrA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 38/75 (50.67%), Postives = 44/75 (58.67%), Query Frame = 2 
Query:  509 GQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDNVW 733
            G   A F  GCFWG E  F + PGV  T  GYS G+  NP+Y +VCSG T H EVVRV +DP   S+  LL   W
Sbjct:   42 GMDLAFFAMGCFWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFW 116
The following BLAST results are available for this feature:
BLAST of CN189021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
MSRA_FRASN1.238e-1552.00Peptide methionine sulfoxide reductase msrA OS=Fra... [more]
MSRA_YERPY2.112e-1550.67Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERPS2.112e-1550.67Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERPP2.112e-1550.67Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERPN2.112e-1550.67Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERPG2.112e-1550.67Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERPE2.112e-1550.67Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERPB2.112e-1550.67Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERPA2.112e-1550.67Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERP32.112e-1550.67Peptide methionine sulfoxide reductase msrA OS=Yer... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001D03_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189021 ID=CN189021; Name=CN189021; organism=Citrus sinensis; type=EST; length=738bp
CTTGAAGGTGTAACGTTAAATTTGCTGACACTATGGAGATTGATAGGGAA
TTTTATTTTAAGTTATTTTGGAAAAATGGAAAGAGGATGAGGAAATAATA
ATATTTTAATTTAAAGTAACTTGAAAAAAAATTCAATCCAATCTCGATTG
AGCAAATCGACACGAGGTAACTGAATTTTCTCAACACGTCTCCAAATCTT
TAAAACCAGCAATGGTCTTAAACAAGTGTCTTTCCATAACCACCACCACC
ACCACCGTCGCCGCTACCATCTCCAAATCGCCACTTCTTCTAATCTCCTC
TTCTCTCTCTTCACCAAAGAACCCTCTTTCTCTCTCTAAACCCAATCCGA
CCCATTTCCCTATCACTGCCCGACCCATTTCCACCCACTACAAGCCCCCC
ATGAACATCCTCAACAAGCTCGGCTTCGGCTTCAGGCCCAGCCCCGACCC
CGCGTCCACGGAGAACTCCGCCATCGCTCAGGGCCCCGACGACGACGTTC
CGGCCCCCGGTCAGCAGTTTGCCCAGTTCGGCGCTGGCTGCTTTTGGGGC
GTCGAATTGGCGTTCCAGAGAGTGCCAGGTGTCACCAAGACCGAAGTTGG
GTACAGCCAAGGCTACTTGCATAACCCTAGCTACGAGGACGTGTGCAGTG
GGACTACCAATCATAATGAAGTTGTTAGGGTTCAGTATGATCCTAAAGAG
TGTAGTTTCGATACTTTGCTTGATAATGTTTGGGCTCG
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