CN189018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_SYNSC (10 kDa chaperonin OS=Synechococcus sp. (strain CC9605) GN=groS PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.071e-20 Identity = 47/98 (47.96%), Postives = 71/98 (72.45%), Query Frame = -3 Query: 162 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 452 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +++G+R+ + G+ V+YSKYAG D K GSD Y+ L +++AV++ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDNVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_PROMP (10 kDa chaperonin OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groS PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.071e-20 Identity = 46/96 (47.92%), Postives = 70/96 (72.92%), Query Frame = -3 Query: 165 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 452 + +KPL DR+FIKV+E+EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVV 102
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_SYNS9 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9902) GN=groS PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20 Identity = 47/98 (47.96%), Postives = 71/98 (72.45%), Query Frame = -3 Query: 162 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 452 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +E+G+R+ + G+ V+YSKYAG D K GSD Y+ L +++A+++ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKPNEDGSRQAPEVGIGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAIVN 103
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_PROMT (10 kDa chaperonin OS=Prochlorococcus marinus (strain NATL2A) GN=groS PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20 Identity = 48/98 (48.98%), Postives = 71/98 (72.45%), Query Frame = -3 Query: 162 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 452 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V VGPG +E+G+R+ ++ G+ V+YSKYAG D K GSD Y+ L +++AV++ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_PROM1 (10 kDa chaperonin OS=Prochlorococcus marinus (strain NATL1A) GN=groS PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20 Identity = 48/98 (48.98%), Postives = 71/98 (72.45%), Query Frame = -3 Query: 162 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 452 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V VGPG +E+G+R+ ++ G+ V+YSKYAG D K GSD Y+ L +++AV++ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_PROM4 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9211) GN=groS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.827e-20 Identity = 48/98 (48.98%), Postives = 70/98 (71.43%), Query Frame = -3 Query: 162 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 452 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V VGPG +E+G+R+ + G+ V+YSKYAG D K GSD Y+ L +++AV++ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQAPEVGVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_PROM2 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9215) GN=groS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.827e-20 Identity = 46/97 (47.42%), Postives = 70/97 (72.16%), Query Frame = -3 Query: 162 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 452 + +KPL DR+FIKV+ +EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+S Sbjct: 8 VSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVVS 103
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_PROM0 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9301) GN=groS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.827e-20 Identity = 46/97 (47.42%), Postives = 70/97 (72.16%), Query Frame = -3 Query: 162 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 452 + +KPL DR+FIKV+ +EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+S Sbjct: 8 VSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVVS 103
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_LEIXX (10 kDa chaperonin OS=Leifsonia xyli subsp. xyli GN=groS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.827e-20 Identity = 48/93 (51.61%), Postives = 67/93 (72.04%), Query Frame = -3 Query: 165 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 443 +KPL DR+ IK EAE+TTA GL++ + +KEKP G+V AVGPG +D+ GNR PL +A G+ V+YSKY G + K G +Y+ L A +V+AV+ Sbjct: 5 IKPLEDRIVIKQVEAEQTTASGLVIPDTAKEKPQEGVVEAVGPGRIDDNGNRVPLDVAVGDKVIYSKYGGTEVK-FGGQDYLVLSARDVLAVV 96
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_CLAM3 (10 kDa chaperonin OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=groS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.386e-20 Identity = 47/93 (50.54%), Postives = 67/93 (72.04%), Query Frame = -3 Query: 165 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 443 +KPL DR+ I+ EAE+TTA GL++ + +KEKP G V+AVGPG +D+ GNR PL +A G+ V+YSKY G + K DG + + L A +V+AV+ Sbjct: 5 IKPLEDRIVIQQVEAEQTTASGLVIPDTAKEKPQEGEVVAVGPGRIDDNGNRVPLDVAVGDKVIYSKYGGTEVK-YDGQDLLVLSARDVLAVI 96 The following BLAST results are available for this feature:
BLAST of CN189018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189018 ID=CN189018; Name=CN189018; organism=Citrus sinensis; type=EST; length=586bpback to top |