CN189018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_MYCS2 (10 kDa chaperonin OS=Mycobacterium smegmatis GN=groS PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.020e-19 Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = -3 Query: 162 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 446 ++KPL D++ ++ EAE TTA GL++ + +KEKP G V+AVGPG DE+G ++ PL +A G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_MYCBT (10 kDa chaperonin OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.020e-19 Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = -3 Query: 162 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 446 ++KPL D++ ++ EAE TTA GL++ + +KEKP G V+AVGPG DE+G ++ PL +A G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_MYCBP (10 kDa chaperonin OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.020e-19 Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = -3 Query: 162 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 446 ++KPL D++ ++ EAE TTA GL++ + +KEKP G V+AVGPG DE+G ++ PL +A G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_MYCBO (10 kDa chaperonin OS=Mycobacterium bovis GN=groS PE=1 SV=4) HSP 1 Score: 95.5153 bits (236), Expect = 2.020e-19 Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = -3 Query: 162 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 446 ++KPL D++ ++ EAE TTA GL++ + +KEKP G V+AVGPG DE+G ++ PL +A G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_LISW6 (10 kDa chaperonin OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.638e-19 Identity = 44/92 (47.83%), Postives = 69/92 (75.00%), Query Frame = -3 Query: 168 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 443 LKPL DRV I+V EAEE TA G++L +++KEKP G ++AVG G + E G ++PL +A G+TV+++KY+G + +GT+Y+ LR S+++A+ Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLENGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_DESDA (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.638e-19 Identity = 43/93 (46.24%), Postives = 66/93 (70.97%), Query Frame = -3 Query: 165 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 443 LKPLNDRV +K E EE TAGGL + + +KEKPS G V+AVGPG + + G R L++ G+ V+++KYAG + K DG +++ +R +++A++ Sbjct: 3 LKPLNDRVLVKRLETEEKTAGGLYIPDTAKEKPSKGQVVAVGPGKVGDNGERTALAVKAGDEVLFNKYAGTEVK-LDGVDHLVMREEDILAII 94
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_SYNJA (10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.446e-19 Identity = 45/100 (45.00%), Postives = 68/100 (68.00%), Query Frame = -3 Query: 165 TDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVL 461 T + LKPL DRV +K+A+ +E TAGG+ L + +KEKP +G V+AVGPG ++EG P+ + G+ V+YSKYAG + K GSD Y+ L +++A++ Sbjct: 5 TLNVSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVKLGSD--EYVLLAERDILAIV 102
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_MYCUA (10 kDa chaperonin OS=Mycobacterium ulcerans (strain Agy99) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.446e-19 Identity = 46/96 (47.92%), Postives = 68/96 (70.83%), Query Frame = -3 Query: 162 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 446 ++KPL D++ ++ EAE TTA GL++ + +KEKP G V+AVGPG DE+G ++ PL +A G+TV+YSKY G + K G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YGGEEYLILSARDVLAVVS 99
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_MYCMM (10 kDa chaperonin OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.446e-19 Identity = 46/96 (47.92%), Postives = 68/96 (70.83%), Query Frame = -3 Query: 162 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 446 ++KPL D++ ++ EAE TTA GL++ + +KEKP G V+AVGPG DE+G ++ PL +A G+TV+YSKY G + K G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YGGEEYLILSARDVLAVVS 99
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_DESVM (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.446e-19 Identity = 43/94 (45.74%), Postives = 67/94 (71.28%), Query Frame = -3 Query: 165 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 446 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+A GPG + E+G +++ G+TV++SKYAG + K DG ++ +R +++A++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLFIPDTAKEKPSRGEVVAAGPGKVAEDGKLIAMTVKKGDTVLFSKYAGTEIK-LDGVEHLVMREDDILAII 94 The following BLAST results are available for this feature:
BLAST of CN189018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189018 ID=CN189018; Name=CN189018; organism=Citrus sinensis; type=EST; length=586bpback to top |