CN189018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_BACCR (10 kDa chaperonin OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=groS PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.309e-18 Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = -3 Query: 165 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 443 LKPL DRV I++ +AEE TA G++L + +KEKP G V+AVG G + E G R L +A G+ +++SKYAG + K +GT+Y+ LR S+++AV+ Sbjct: 2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_BACC4 (10 kDa chaperonin OS=Bacillus cereus (strain B4264) GN=groS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.309e-18 Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = -3 Query: 165 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 443 LKPL DRV I++ +AEE TA G++L + +KEKP G V+AVG G + E G R L +A G+ +++SKYAG + K +GT+Y+ LR S+++AV+ Sbjct: 2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_BACC2 (10 kDa chaperonin OS=Bacillus cereus (strain G9842) GN=groS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.309e-18 Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = -3 Query: 165 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 443 LKPL DRV I++ +AEE TA G++L + +KEKP G V+AVG G + E G R L +A G+ +++SKYAG + K +GT+Y+ LR S+++AV+ Sbjct: 2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH101_RHOBA (10 kDa chaperonin 1 OS=Rhodopirellula baltica GN=groS1 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.309e-18 Identity = 45/92 (48.91%), Postives = 68/92 (73.91%), Query Frame = -3 Query: 171 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMA 446 +L+PL+DRV ++ +EAEETTAGG++L +++KEKP G V+AVGPG L + GNR LS++ G+ V+Y KY G++ + DG LR S+++A Sbjct: 8 NLRPLDDRVVVQPSEAEETTAGGIVLPDSAKEKPQRGTVVAVGPGKLLDSGNRGELSVSVGDVVIYGKYGGSEIE-VDGHEMKILRESDILA 98
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_MYCVP (10 kDa chaperonin OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=groS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.710e-18 Identity = 44/96 (45.83%), Postives = 68/96 (70.83%), Query Frame = -3 Query: 162 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 446 ++KPL D++ ++ EAE TTA GL++ + +KEKP G V+AVGPG DE+G ++ PL ++ G+ V+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVSEGDVVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_MYCPA (10 kDa chaperonin OS=Mycobacterium paratuberculosis GN=groS PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 1.710e-18 Identity = 45/96 (46.88%), Postives = 68/96 (70.83%), Query Frame = -3 Query: 162 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 446 ++KPL D++ ++ EAE TTA GL++ + +KEKP G V+AVGPG D++G R PL ++ G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_MYCGI (10 kDa chaperonin OS=Mycobacterium gilvum (strain PYR-GCK) GN=groS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.710e-18 Identity = 44/96 (45.83%), Postives = 68/96 (70.83%), Query Frame = -3 Query: 162 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 446 ++KPL D++ ++ EAE TTA GL++ + +KEKP G V+AVGPG DE+G ++ PL ++ G+ V+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVSEGDVVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_MYCAV (10 kDa chaperonin OS=Mycobacterium avium GN=groS PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 1.710e-18 Identity = 45/96 (46.88%), Postives = 68/96 (70.83%), Query Frame = -3 Query: 162 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 446 ++KPL D++ ++ EAE TTA GL++ + +KEKP G V+AVGPG D++G R PL ++ G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_MYCA1 (10 kDa chaperonin OS=Mycobacterium avium (strain 104) GN=groS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.710e-18 Identity = 45/96 (46.88%), Postives = 68/96 (70.83%), Query Frame = -3 Query: 162 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 446 ++KPL D++ ++ EAE TTA GL++ + +KEKP G V+AVGPG D++G R PL ++ G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_ANASP (10 kDa chaperonin OS=Anabaena sp. (strain PCC 7120) GN=groS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.710e-18 Identity = 44/97 (45.36%), Postives = 69/97 (71.13%), Query Frame = -3 Query: 165 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVL 452 + +KPL DRVF+KV+ +EE TAGGL L + +KEKP +G V+A+G G +++G+R+ L + G+ V+YSKYAG D K G++ Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDKVLYSKYAGTDVKLGTE--EYVLLSEKDILAVV 102 The following BLAST results are available for this feature:
BLAST of CN189018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189018 ID=CN189018; Name=CN189018; organism=Citrus sinensis; type=EST; length=586bpback to top |