CN189018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_NOCFA (10 kDa chaperonin OS=Nocardia farcinica GN=groS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.917e-18 Identity = 44/95 (46.32%), Postives = 66/95 (69.47%), Query Frame = -3 Query: 165 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 446 ++KPL D++ ++ EAE TTA GL++ + +KEKP G V+AVGPG DE+G ++ PL + G+TV+YSKY G + K G Y+ L A +V+AV+ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVQEGDTVIYSKYGGTEIK-YQGEEYLILSARDVLAVV 98
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_EXIS2 (10 kDa chaperonin OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=groS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.917e-18 Identity = 45/92 (48.91%), Postives = 66/92 (71.74%), Query Frame = -3 Query: 168 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 443 LKPL DR+ I+V + EETT GG++L ++KEKP G V+AVG G + E+G R PL + G+ V+Y++YAG++ K DG Y+ LR S+++AV Sbjct: 2 LKPLGDRIVIEVVKKEETTLGGIVLPGSAKEKPQEGKVVAVGTGRVTEQGVRVPLEVNVGDHVIYAQYAGSEVK-VDGNEYLILRESDILAV 92
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_STRLI (10 kDa chaperonin OS=Streptomyces lividans GN=groS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.810e-18 Identity = 43/93 (46.24%), Postives = 67/93 (72.04%), Query Frame = -3 Query: 165 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 443 +KPL DR+ ++ +AE+TTA GL++ + +KEKP G+V+AVGPG E+GNR PL ++ G+ V+YSKY G + K +G Y+ L A +V+A++ Sbjct: 10 IKPLEDRIVVQPLDAEQTTASGLVIPDTAKEKPQEGVVLAVGPGRF-EDGNRLPLDVSVGDVVLYSKYGGTEVK-YNGEEYLVLSARDVLAIV 100
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_STRCO (10 kDa chaperonin OS=Streptomyces coelicolor GN=groS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.810e-18 Identity = 43/93 (46.24%), Postives = 67/93 (72.04%), Query Frame = -3 Query: 165 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 443 +KPL DR+ ++ +AE+TTA GL++ + +KEKP G+V+AVGPG E+GNR PL ++ G+ V+YSKY G + K +G Y+ L A +V+A++ Sbjct: 10 IKPLEDRIVVQPLDAEQTTASGLVIPDTAKEKPQEGVVLAVGPGRF-EDGNRLPLDVSVGDVVLYSKYGGTEVK-YNGEEYLVLSARDVLAIV 100
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_STRAW (10 kDa chaperonin OS=Streptomyces avermitilis GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.975e-18 Identity = 43/93 (46.24%), Postives = 66/93 (70.97%), Query Frame = -3 Query: 165 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 443 +KPL DR+ ++ +AE+TTA GL++ + +KEKP G+V+AVGPG E+GNR PL + G+ V+YSKY G + K +G Y+ L A +V+A++ Sbjct: 10 IKPLEDRIVVQPLDAEQTTASGLVIPDTAKEKPQEGVVLAVGPGRF-EDGNRLPLDVTVGDVVLYSKYGGTEVK-YNGEEYLVLSARDVLAIV 100
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_DESDG (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.975e-18 Identity = 42/94 (44.68%), Postives = 67/94 (71.28%), Query Frame = -3 Query: 165 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 446 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G VIAVGPG ++G +++ G+ V+++KYAG + K DG +++ +R +++A++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVIAVGPGKTADDGKVIAMTVKTGDVVLFNKYAGTEVK-LDGVDHLVMREDDILAII 94
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_EXISA (10 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18 Identity = 44/93 (47.31%), Postives = 63/93 (67.74%), Query Frame = -3 Query: 165 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 443 LKPL DRV I+V E EE T GG++L + +KEKP G V+AVG G + +EG R L + + V+YSKYAG + K DG Y+ +R S+++A++ Sbjct: 2 LKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVK-HDGKEYLIVRESDILAIV 93
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_COREF (10 kDa chaperonin OS=Corynebacterium efficiens GN=groS PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18 Identity = 41/94 (43.62%), Postives = 65/94 (69.15%), Query Frame = -3 Query: 165 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 446 ++KPL D++ +++ EAE TTA GL++ +++KEKP VIAVGPG DE+G R PL I + V++S+Y G + K DG Y+ L A +++A++ Sbjct: 5 NIKPLEDKILVQINEAETTTASGLVIPDSAKEKPQEATVIAVGPGRFDEKGERIPLDIKEDDVVIFSRYGGTEIK-FDGVEYLLLSARDILAIV 97
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_CORK4 (10 kDa chaperonin OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=groS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.487e-18 Identity = 41/94 (43.62%), Postives = 64/94 (68.09%), Query Frame = -3 Query: 165 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 446 ++KPL D++ +++ EAE TTA GL++ + +KEKP V+AVGPG DE G R P+ +A G+ V++SKY G + K + G Y+ L +V+AV+ Sbjct: 5 NIKPLEDKLLVQIVEAETTTASGLVIPDTAKEKPQEATVVAVGPGRTDENGKRVPMDVAEGDVVIFSKYGGTEIKYA-GEEYLILSQRDVLAVV 97
BLAST of CN189018 vs. ExPASy Swiss-Prot
Match: CH10_CORDI (10 kDa chaperonin OS=Corynebacterium diphtheriae GN=groS PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.108e-17 Identity = 42/94 (44.68%), Postives = 68/94 (72.34%), Query Frame = -3 Query: 165 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 446 ++KPL DRV ++++EAE TTA GL++ +++KEKP G+V+A GPG D + +R P+ I G+TV++SKY G + K +G Y+ L A +V+A++ Sbjct: 5 NIKPLEDRVLVQISEAETTTASGLVIPDSAKEKPQEGVVVAAGPGRFDGD-DRVPMDIKEGDTVVFSKYGGTELK-YNGEEYLLLNARDVLAII 96 The following BLAST results are available for this feature:
BLAST of CN189018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189018 ID=CN189018; Name=CN189018; organism=Citrus sinensis; type=EST; length=586bpback to top |