CN189017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_SYNS3 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9311) GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.251e-18 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 244 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGIL 522 +++KPLGDRV VKI EEKT GGI LP TA+ KPQ GEVV VG GK+ ++ V G +V+YSKYAGT+++L +++L E D++ ++ Sbjct: 9 STVKPLGDRVFVKISESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKSNDDGSRQAPEVGIGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_LEPIN (10 kDa chaperonin OS=Leptospira interrogans GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.251e-18 Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 SIKPLGDRVLV+ + E+ G IF+P TA+ KPQ G+VV +G GK + + VK G V+Y KY+GTE++ G +LI+RE D++ +++ Sbjct: 3 SIKPLGDRVLVEPRQEAEEKIGSIFVPDTAKEKPQEGKVVEIGSGKYEDGKLIPLEVKVGDTVLYGKYSGTEIKSEGKEYLIIRESDILAVVK 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_LEPIC (10 kDa chaperonin OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=groS PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.251e-18 Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 SIKPLGDRVLV+ + E+ G IF+P TA+ KPQ G+VV +G GK + + VK G V+Y KY+GTE++ G +LI+RE D++ +++ Sbjct: 3 SIKPLGDRVLVEPRQEAEEKIGSIFVPDTAKEKPQEGKVVEIGSGKYEDGKLIPLEVKVGDTVLYGKYSGTEIKSEGKEYLIIRESDILAVVK 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_GEOBB (10 kDa chaperonin OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.251e-18 Identity = 44/94 (46.81%), Postives = 67/94 (71.28%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +++PL DR++VK T GG+++P TA+ KPQ GEVVAVG GK K+ I +K G +V++ KYAG+E++L G + LI+REDD++G++E Sbjct: 2 NLRPLQDRIIVKRVEEATMTAGGLYIPETAKEKPQQGEVVAVGNGKRGEDGKVYPIDLKVGDKVLFGKYAGSEVKLEGEDFLIMREDDILGVVE 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_CLOCE (10 kDa chaperonin OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.251e-18 Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 IKPLGDRV++K+ EE T GI LP +A+ KPQ E+VAVG G V ++ + VK G +V+ SKY+GTE++ +G + IL++ D++ I+E Sbjct: 3 IKPLGDRVVIKMLESEETTKSGIVLPGSAKEKPQVAEIVAVGPGTVVDGKEVKMEVKVGDRVLTSKYSGTEVKFDGQEYTILKQGDILAIVE 94
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_ACIF5 (10 kDa chaperonin OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.251e-18 Identity = 42/93 (45.16%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 ++PL DRV+++ E+KT GGI +P TA+ KP GE+VA G GK + K+ + VK G QV+++KYAGTE+++ G L++REDD++ ++E Sbjct: 3 LRPLHDRVVIRRLEEEQKTAGGIIIPDTAKEKPVRGEIVAAGHGKILEDGKVRALDVKTGDQVLFAKYAGTEIKVEGEELLVMREDDIMAVIE 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_ACIF2 (10 kDa chaperonin OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.251e-18 Identity = 42/93 (45.16%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 ++PL DRV+++ E+KT GGI +P TA+ KP GE+VA G GK + K+ + VK G QV+++KYAGTE+++ G L++REDD++ ++E Sbjct: 3 LRPLHDRVVIRRLEEEQKTAGGIIIPDTAKEKPVRGEIVAAGHGKILEDGKVRALDVKTGDQVLFAKYAGTEIKVEGEELLVMREDDIMAVIE 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_SYNS9 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9902) GN=groS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.470e-18 Identity = 46/94 (48.94%), Postives = 64/94 (68.09%), Query Frame = 1 Query: 244 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGIL 522 +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ GEVV VG GK ++ V G +V+YSKYAGT+++L +++L E D++ I+ Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKPNEDGSRQAPEVGIGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAIV 102
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_SYNPW (10 kDa chaperonin OS=Synechococcus sp. (strain WH7803) GN=groS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.470e-18 Identity = 45/94 (47.87%), Postives = 64/94 (68.09%), Query Frame = 1 Query: 244 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGIL 522 +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ GEVV VG GK ++ V G +V+YSKYAGT+++L +++L E D++ ++ Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKANEDGSRQAPEVGVGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_SYNP6 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.470e-18 Identity = 44/94 (46.81%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 244 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGIL 522 +++ PLGDRV VK+ EEKT GGI LP A+ KPQ GE+VAVG GK ++ VK G +V+YSKYAGT+++L ++++L E D++ ++ Sbjct: 9 STVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGNDDYVLLSEKDILAVV 102 The following BLAST results are available for this feature:
BLAST of CN189017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189017 ID=CN189017; Name=CN189017; organism=Citrus sinensis; type=EST; length=617bpback to top |