CN189003

Overview
NameCN189003
Unique NameCN189003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI1_SOYBN (Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4)

HSP 1 Score: 229.95 bits (585), Expect = 1.317e-59
Identity = 111/160 (69.38%), Postives = 128/160 (80.00%), Query Frame = -1
Query:  353 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 832
            E+AINEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELALSLEKL NEKLL++HSVADRNNDPQMA+F+ESEFL EQVE+I KI++YV+QLR VGKGHG+WHFDQ LL
Sbjct:   90 ESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNAPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.833e-59
Identity = 113/162 (69.75%), Postives = 130/162 (80.25%), Query Frame = -1
Query:  347 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 832
            E+AIN+QINVEYNVSYVYHALYAYFDRDN+ L+G                  FMEYQN RGG+VKL SI+ P SEFDH EKGDAL+AMELALSLEKLTNEKLL L SV  +NND Q+ +FVESEFLGEQVEAI KI++YV+QLR +GKGHG+WHFDQMLL++
Sbjct:   90 ESAINDQINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHEEKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVAQLRRIGKGHGVWHFDQMLLND 251          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.484e-58
Identity = 112/160 (70.00%), Postives = 127/160 (79.38%), Query Frame = -1
Query:  353 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 832
            EAA+NEQINVEYNVSYVYHALYAYFDRDN+AL+GL                  MEYQN RGG+VKL  ++ P SEFDH EKGDALYAMELALSLEKL NEKLL+LHSVA +N+D Q+A+F+ES FL EQVEAI KI++YVSQLR +GKGHG WHFDQ LL
Sbjct:   96 EAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDVQLADFIESVFLNEQVEAIKKISEYVSQLRRLGKGHGTWHFDQELL 255          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.237e-58
Identity = 112/160 (70.00%), Postives = 127/160 (79.38%), Query Frame = -1
Query:  353 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 832
            EAAINEQINVEYNVSYVYHA+YAYFDRDNIAL+GL                  MEYQN RGG+VKL SI+ P SEF+H +KGDALY MELALSLEKL NEKLL+LHSVA +NND  +A+F+ESEFL EQVEAI  I++YV+QLR VGKGHG WHF+QMLL
Sbjct:   98 EAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVAQLRRVGKGHGTWHFNQMLL 257          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.534e-58
Identity = 111/166 (66.87%), Postives = 133/166 (80.12%), Query Frame = -1
Query:  335 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGDAA 832
            EAAINEQINVEYN SYVYHA++AYFDRDN+AL+GL                  ME+QN RGG+VKL SI  PP+EFDH EKGDALYAMELAL LEKLTN++LL+LH+VA R+ND  +A+F+ESEFL EQV+AI KI++YV+QLR VG+GHG+W FDQMLL+EG AA
Sbjct:   86 EAAINEQINVEYNNSYVYHAMFAYFDRDNVALKGLAKFFKESSLEEREHAEKLMEFQNKRGGRVKLLSICAPPTEFDHCEKGDALYAMELALCLEKLTNQRLLNLHAVASRSNDVHLADFLESEFLVEQVDAIKKISEYVAQLRRVGQGHGVWQFDQMLLNEGAAA 251          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI1_PEA (Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.103e-57
Identity = 107/161 (66.46%), Postives = 125/161 (77.64%), Query Frame = -1
Query:  350 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 832
            E+ INEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELALSLEKLTNEKLL++HSVA+RNND +M  F+E E+L EQVEAI KI++YV+QLR VGKGHG+WHFDQ LLH
Sbjct:   88 ESVINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEHREHAEKLMKYQNTRGGRVVLHPIKDVPSEFEHVEKGDALYAMELALSLEKLTNEKLLNVHSVAERNNDLEMTHFIEGEYLAEQVEAIKKISEYVAQLRRVGKGHGVWHFDQRLLH 248          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.103e-57
Identity = 109/162 (67.28%), Postives = 126/162 (77.78%), Query Frame = -1
Query:  347 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 832
            EAA+NEQINVEYN SY YH+L+AYFDRDN+AL+G                   MEYQN RGG+V+L SI+ P +EFDH EKGDALYAMELAL+LEKL NEKL +LH VA R NDPQ+ +F+ESEFL EQ EAINKI+KYV+QLR VGKGHG+WHFDQMLL E
Sbjct:   91 EAALNEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVTPLTEFDHPEKGDALYAMELALALEKLVNEKLHNLHGVATRCNDPQLTDFIESEFLEEQGEAINKISKYVAQLRRVGKGHGVWHFDQMLLEE 252          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 6.765e-56
Identity = 109/163 (66.87%), Postives = 125/163 (76.69%), Query Frame = -1
Query:  347 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG-KGHGLWHFDQMLLHE 832
            EAAINEQINVEYN SY YH+L+AYFDRDN+AL+G                   MEYQN RGG+V+L SI+ P +EFDH EKGDALYAMEL L+LEKL NEKL SLH VA R NDPQ+ +F+ESEFL EQ EAINK++KYV+QLR VG KGHG+WHFDQMLL E
Sbjct:   88 EAAINEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVAPLTEFDHPEKGDALYAMELTLALEKLVNEKLHSLHGVATRCNDPQLIDFIESEFLEEQGEAINKVSKYVAQLRRVGNKGHGVWHFDQMLLQE 250          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIS_LYMST (Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 4.569e-28
Identity = 68/160 (42.50%), Postives = 95/160 (59.38%), Query Frame = -1
Query:  353 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 832
            EA IN QIN+E   SY Y ++  YFDRD++AL G                   M+YQN RGG++ L  I +P    D  E G  L AM++AL LEK  N+ LL LH +   ++D QMA+F+ESEFL EQV++I +++ Y++ L+ VG G G + FD+  L
Sbjct:   15 EAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRIVLQDIKKP----DRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEEQVKSIKELSDYITNLKRVGPGLGEYIFDKETL 170          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_ECHGR (Ferritin heavy chain OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.920e-26
Identity = 68/164 (41.46%), Postives = 91/164 (55.49%), Query Frame = -1
Query:  341 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGD 832
            E  IN QIN+E   SY+Y A+  +FDRD++AL G                   M YQ  RGG++    I +P +     E    L AME+AL +E+  NE LL+L  VA++NND Q  EF+E EFLGEQV  I K+A YV+ L+  G G G + FD+  L  G+
Sbjct:   13 ERGINRQINMELYASYLYLAMSQHFDRDDVALPGFREFFAKASEEEREHAIKLMRYQCGRGGRIVYQDIAKPQT----TEWASGLEAMEMALKIEREVNESLLALRGVANKNNDSQFCEFLEGEFLGEQVSDIKKLAGYVTNLKRCGPGLGEYIFDKETLQGGE 172          
The following BLAST results are available for this feature:
BLAST of CN189003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRI1_SOYBN1.317e-5969.38Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4[more]
FRI2_ARATH3.833e-5969.75Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI3_ARATH2.484e-5870.00Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI4_ARATH4.237e-5870.00Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_TOBAC5.534e-5866.87Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI1_PEA2.103e-5766.46Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV... [more]
FRI1_MAIZE2.103e-5767.28Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRI2_MAIZE6.765e-5666.87Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]
FRIS_LYMST4.569e-2842.50Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2[more]
FRIH_ECHGR1.920e-2641.46Ferritin heavy chain OS=Echinococcus granulosus PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001C17_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189003 ID=CN189003; Name=CN189003; organism=Citrus sinensis; type=EST; length=832bp
TTTTTTTTTTTTGCGAACAGAACTTTTATTGAACAACTTAATTATATTTA
TACAATCAGAAGATGGATTTGGTGCTCTGCTTAAACTATTAGATCCCTTC
ACACAGTCTGTTACTAAATAAAGAAAAAGCACCATCAAAAAGACTATCTA
AATGCGACCACACTAATATGATAAAGCAAGGAGGCTATTGAGTATTAACT
TTGTAGGACTTAACACTGTTTCAGCTTATTTTTTGTCAACACACTCAACC
TCCTGTGGCAGAGATACTTCAGAACATTTGGCAGAAAAGAGTTGACTAAA
GCACAAAGAAATGTAACAATATGGTTCTTCATCATGCAGCATCACCCTCG
TGGAGAAGCATTTGATCGAAGTGCCATAATCCGTGGCCTTTCCCAACCAT
CCTCAGTTGAGAAACATATTTTGCGATCTTGTTAATTGCTTCAACCTGCT
CACCCAAAAATTCACTCTCGACAAACTCTGCCATTTGGGGATCATTGTTT
CTATCCGCCACACTGTGCAGGCTCAGAAGCTTCTCGTTTGTTAGCTTCTC
CAGGGACAATGCTAGTTCCATTGCATACAAGGCATCCCCTTTCTCCGCAT
GATCAAACTCCGAAGGGGGCTGCATTATGGAGTGCAGTTTTACTTTTCCA
CCGCGCAAGTTCTGATACTCCATAAACTTCTCAGCATGTTCCCTTTCTTC
TTCACTGGACTCCTTGAAAAATTTGGCAAGGCCTCTCAGAGCAATATTAT
CCCGATCAAAGTACGCATACAGGGCATGGTACACGTATGAGACATTATAT
TCCACATTGATCTGCTCGTTGATAGCGGCCTC
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