CN189003

Overview
NameCN189003
Unique NameCN189003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_PONAB (Ferritin heavy chain OS=Pongo abelii GN=FTH1 PE=2 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 5.228e-24
Identity = 67/167 (40.12%), Postives = 94/167 (56.29%), Query Frame = -1
Query:  341 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHEGD 832
            EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P  + D  E G  L AME AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV+AI ++  +V+ LR +G    G   + FD+  L + D
Sbjct:   18 EAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--DCDDWESG--LNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFLETHYLNEQVKAIKELGDHVTNLRKMGAPESGLAEYLFDKHTLGDSD 180          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_PAGBE (Ferritin, heavy subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.228e-24
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = -1
Query:  392 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG 832
            EAAIN QIN+E   SY Y ++  YFDRD++AL G                   +++QN RGG++ L  + +P    D  E G  L A+E AL LEK  N+ LL LH V   +NDP M +F+E+ +L EQV++I ++  +V+ LR +G
Sbjct:   14 EAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKQQSEEEREHAEKLLKFQNQRGGRIFLQDVKKP----DRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSEHNDPHMCDFLETHYLDEQVKSIKELGDWVTNLRRLG 156          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_FELCA (Ferritin heavy chain OS=Felis catus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 5.228e-24
Identity = 64/168 (38.10%), Postives = 93/168 (55.36%), Query Frame = -1
Query:  338 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHEGDA 832
            EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV++I ++  +V+ LR +G    G   + FD+  L   D+
Sbjct:   18 EAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGTPESGMAEYLFDKHTLGNSDS 181          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_TRENE (Ferritin, heavy subunit OS=Trematomus newnesi PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.828e-24
Identity = 60/147 (40.82%), Postives = 84/147 (57.14%), Query Frame = -1
Query:  392 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG 832
            EAAIN QIN+E   SY Y ++  YFDRD++AL G                   M+ QN RGG++ L  + +P    D  E G  L A+E AL LEK  N+ LL LH V   +NDP M +F+E+ +L EQV++I ++  +V+ LR +G
Sbjct:   14 EAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKHQSEEEREHAEKLMKQQNQRGGRIFLQDVKKP----DRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSEHNDPHMCDFLETHYLDEQVKSIKELGDWVTNLRRLG 156          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_SHEEP (Ferritin heavy chain OS=Ovis aries GN=FTH1 PE=1 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 6.828e-24
Identity = 61/154 (39.61%), Postives = 87/154 (56.49%), Query Frame = -1
Query:  380 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGK---GHG 832
            EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RG ++ L  I +P    D  +  + L AME AL LE+  N+ LL LH +A   NDP + +F+E+ +L EQVEAI ++  +++ LR +G    GHG
Sbjct:   18 EAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAERLMKLQNQRGARIFLQDIKKP----DRDDWENGLNAMECALCLERSVNQSLLELHKLATEKNDPHLCDFIETHYLNEQVEAIKELGDHITNLRKMGALWIGHG 167          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_CANFA (Ferritin heavy chain OS=Canis familiaris GN=FTH1 PE=2 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 6.828e-24
Identity = 64/167 (38.32%), Postives = 92/167 (55.09%), Query Frame = -1
Query:  341 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHEGD 832
            EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV++I ++  +V+ LR +G    G   + FD+  L   D
Sbjct:   18 EAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDKHTLGNSD 180          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_RABIT (Ferritin heavy chain (Fragment) OS=Oryctolagus cuniculus GN=FTH1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.918e-24
Identity = 65/165 (39.39%), Postives = 92/165 (55.76%), Query Frame = -1
Query:  341 AINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHEGD 826
            AIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P  E+D  E G  L AME AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV++I ++  +V+ LR +G    G   + FD+  L   D
Sbjct:    1 AINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--EYDDWESG--LNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDKHTLGHSD 161          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_CRIGR (Ferritin heavy chain OS=Cricetulus griseus GN=FTH1 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.521e-23
Identity = 59/147 (40.14%), Postives = 84/147 (57.14%), Query Frame = -1
Query:  392 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG 832
            EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +    L AME AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV++I ++  +V+ LR +G
Sbjct:   23 EAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMG 165          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH1_SCHMA (Ferritin-1 heavy chain OS=Schistosoma mansoni GN=SCM-1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.521e-23
Identity = 58/161 (36.02%), Postives = 89/161 (55.28%), Query Frame = -1
Query:  350 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 832
            EA +N+QIN+E   SYVY  +  +F+RD++AL G                   M YQN+RGG++ L  I  PP           L+AM+ AL LEK  N+ L+ L +V +R+ D    +F+ +E+L  QV+++ K++ Y++ L  VG G G + FD+  LH
Sbjct:   13 EAGVNKQINMELYASYVYMTMAFHFNRDDVALNGFYKFFLNESEEERQHAIKLMTYQNMRGGRIVLQDISAPPQ----LSWNSGLHAMQDALDLEKKVNQSLMELVAVGERHRDTHFCDFINNEYLEIQVQSMKKLSDYITNLIRVGNGLGEYTFDKETLH 169          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH2_XENLA (Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.549e-23
Identity = 63/165 (38.18%), Postives = 93/165 (56.36%), Query Frame = -1
Query:  347 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHE 832
            EAAIN  +N+E   SYVY ++  YFDRD++AL  +                 F++YQN RGG+V L  I +P  +    E G+ L A + AL LEK  N+ LL LH +A    D  + +F+ESE+L EQV+A+ ++  Y++ L+ +G    G G + FD+  L E
Sbjct:   14 EAAINRMVNMEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKPERD----EWGNTLEATQAALQLEKTVNQALLDLHKLASDKVDAHLCDFLESEYLEEQVKAMKQLGDYITNLKRLGVPQNGMGEYLFDKHTLGE 174          
The following BLAST results are available for this feature:
BLAST of CN189003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRIH_PONAB5.228e-2440.12Ferritin heavy chain OS=Pongo abelii GN=FTH1 PE=2 ... [more]
FRIH_PAGBE5.228e-2440.14Ferritin, heavy subunit OS=Pagothenia bernacchii P... [more]
FRIH_FELCA5.228e-2438.10Ferritin heavy chain OS=Felis catus GN=FTH1 PE=2 S... [more]
FRIH_TRENE6.828e-2440.82Ferritin, heavy subunit OS=Trematomus newnesi PE=1... [more]
FRIH_SHEEP6.828e-2439.61Ferritin heavy chain OS=Ovis aries GN=FTH1 PE=1 SV... [more]
FRIH_CANFA6.828e-2438.32Ferritin heavy chain OS=Canis familiaris GN=FTH1 P... [more]
FRIH_RABIT8.918e-2439.39Ferritin heavy chain (Fragment) OS=Oryctolagus cun... [more]
FRIH_CRIGR1.521e-2340.14Ferritin heavy chain OS=Cricetulus griseus GN=FTH1... [more]
FRIH1_SCHMA1.521e-2336.02Ferritin-1 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRIH2_XENLA7.549e-2338.18Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001C17_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189003 ID=CN189003; Name=CN189003; organism=Citrus sinensis; type=EST; length=832bp
TTTTTTTTTTTTGCGAACAGAACTTTTATTGAACAACTTAATTATATTTA
TACAATCAGAAGATGGATTTGGTGCTCTGCTTAAACTATTAGATCCCTTC
ACACAGTCTGTTACTAAATAAAGAAAAAGCACCATCAAAAAGACTATCTA
AATGCGACCACACTAATATGATAAAGCAAGGAGGCTATTGAGTATTAACT
TTGTAGGACTTAACACTGTTTCAGCTTATTTTTTGTCAACACACTCAACC
TCCTGTGGCAGAGATACTTCAGAACATTTGGCAGAAAAGAGTTGACTAAA
GCACAAAGAAATGTAACAATATGGTTCTTCATCATGCAGCATCACCCTCG
TGGAGAAGCATTTGATCGAAGTGCCATAATCCGTGGCCTTTCCCAACCAT
CCTCAGTTGAGAAACATATTTTGCGATCTTGTTAATTGCTTCAACCTGCT
CACCCAAAAATTCACTCTCGACAAACTCTGCCATTTGGGGATCATTGTTT
CTATCCGCCACACTGTGCAGGCTCAGAAGCTTCTCGTTTGTTAGCTTCTC
CAGGGACAATGCTAGTTCCATTGCATACAAGGCATCCCCTTTCTCCGCAT
GATCAAACTCCGAAGGGGGCTGCATTATGGAGTGCAGTTTTACTTTTCCA
CCGCGCAAGTTCTGATACTCCATAAACTTCTCAGCATGTTCCCTTTCTTC
TTCACTGGACTCCTTGAAAAATTTGGCAAGGCCTCTCAGAGCAATATTAT
CCCGATCAAAGTACGCATACAGGGCATGGTACACGTATGAGACATTATAT
TCCACATTGATCTGCTCGTTGATAGCGGCCTC
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