CN182294
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182294 vs. ExPASy Swiss-Prot
Match: MSRA_SHIFL (Peptide methionine sulfoxide reductase msrA OS=Shigella flexneri GN=msrA PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 2.905e-23 Identity = 62/145 (42.76%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 136 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEH 546 ++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q ++ +TT+I FY AE +H Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDH 187
BLAST of CN182294 vs. ExPASy Swiss-Prot
Match: MSRA_SHIF8 (Peptide methionine sulfoxide reductase msrA OS=Shigella flexneri serotype 5b (strain 8401) GN=msrA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.905e-23 Identity = 62/145 (42.76%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 136 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEH 546 ++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q ++ +TT+I FY AE +H Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDH 187
BLAST of CN182294 vs. ExPASy Swiss-Prot
Match: MSRA_SHIBS (Peptide methionine sulfoxide reductase msrA OS=Shigella boydii serotype 4 (strain Sb227) GN=msrA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.905e-23 Identity = 62/145 (42.76%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 136 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEH 546 ++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q ++ +TT+I FY AE +H Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDH 187
BLAST of CN182294 vs. ExPASy Swiss-Prot
Match: MSRA_SALTY (Peptide methionine sulfoxide reductase msrA OS=Salmonella typhimurium GN=msrA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.905e-23 Identity = 61/145 (42.07%), Postives = 82/145 (56.55%), Query Frame = 1 Query: 136 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEH 546 ++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YDP VI++ QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q ++ +TT+I FY AE EH Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVISYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMTAAGDHRPITTEIAHATPFYYAEDEH 187
BLAST of CN182294 vs. ExPASy Swiss-Prot
Match: MSRA_SALNS (Peptide methionine sulfoxide reductase msrA OS=Salmonella newport (strain SL254) GN=msrA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.905e-23 Identity = 61/145 (42.07%), Postives = 82/145 (56.55%), Query Frame = 1 Query: 136 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEH 546 ++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YDP VI++ QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q ++ +TT+I FY AE EH Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVISYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMTAAGDHRPITTEIAHATPFYYAEDEH 187
BLAST of CN182294 vs. ExPASy Swiss-Prot
Match: MSRA_RHOCS (Peptide methionine sulfoxide reductase msrA OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=msrA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.905e-23 Identity = 61/144 (42.36%), Postives = 81/144 (56.25%), Query Frame = 1 Query: 136 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKS---SIVTTQIQQLVAFYPAEPEH 546 L+ AVF +G FW E F + GV T GYAGG NP + + HAE V V YDP +++ +LL+VFW +HD Q QG DVG QYRS I+ E+ RLA S++ + K+ VTT+I++ AFY AE H Sbjct: 46 LETAVFGMGCFWGVERKFWQVPGVYSTAAGYAGGPTPNPTYEEVCTGRTGHAEVVLVVYDPATVSYAELLKVFWENHDPTQGMRQGNDVGTQYRSAIYATTPEQLRLAEASRDSYASRLKAQGYGAVTTEIREAPAFYYAEDYH 189
BLAST of CN182294 vs. ExPASy Swiss-Prot
Match: MSRA_ECOSM (Peptide methionine sulfoxide reductase msrA OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=msrA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.905e-23 Identity = 62/145 (42.76%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 136 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEH 546 ++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q ++ +TT+I FY AE +H Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRRITTEIANATPFYYAEDDH 187
BLAST of CN182294 vs. ExPASy Swiss-Prot
Match: MSRA_ECOLU (Peptide methionine sulfoxide reductase msrA OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=msrA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.905e-23 Identity = 62/145 (42.76%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 136 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEH 546 ++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q ++ +TT+I FY AE +H Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRRITTEIANATPFYYAEDDH 187
BLAST of CN182294 vs. ExPASy Swiss-Prot
Match: MSRA_ECOLI (Peptide methionine sulfoxide reductase msrA OS=Escherichia coli (strain K12) GN=msrA PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 2.905e-23 Identity = 62/145 (42.76%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 136 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEH 546 ++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q ++ +TT+I FY AE +H Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDH 187
BLAST of CN182294 vs. ExPASy Swiss-Prot
Match: MSRA_ECOLC (Peptide methionine sulfoxide reductase msrA OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=msrA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.905e-23 Identity = 62/145 (42.76%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 136 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEH 546 ++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q ++ +TT+I FY AE +H Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDH 187 The following BLAST results are available for this feature:
BLAST of CN182294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 300
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182294 ID=CN182294; Name=CN182294; organism=Citrus sinensis; type=EST; length=653bpback to top |