CN182290
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182290 vs. ExPASy Swiss-Prot
Match: PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 9.882e-27 Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = -3 Query: 153 AHNKPEDYLKAHNEARASVGIGPMSWVYKLADYSHKHAQKLKGNCNLKKPQVSKYSETIAWSNQG-KITATEFVKMCMDGKPLYDDNSNTCALNGTKCAIYTQVVWRNSVRLGCAKERCNNNGTLNFVICNYDPRGNVFGQNPY 581 A N P+DY+ HN AR++VG+G +SW KL ++ +A + +C L+ Y E I W + G A + V ++ K Y+ SNTCA G C YTQVVWR S +GCA+ CNNN + F+ CNY+PRGN+ GQ PY Sbjct: 24 AQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQH-SGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAA-GKVCGHYTQVVWRASTSIGCARVVCNNNRGV-FITCNYEPRGNIVGQKPY 164
BLAST of CN182290 vs. ExPASy Swiss-Prot
Match: PRMS_MAIZE (Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.291e-26 Identity = 60/144 (41.67%), Postives = 87/144 (60.42%), Query Frame = -3 Query: 153 AHNKPEDYLKAHNEARASVGIGPMSWVYKLADYSHKHAQKLKGNCNLKKPQVSKYSETIAWSNQG-KITATEFVKMCMDGKPLYDDNSNTCALNGTKCAIYTQVVWRNSVRLGCAKERCNNNGTLNFVICNYDPRGNVFGQNPY 581 + N P+DYL N ARA+VG+GP++W KL ++ K+A + G+C L+ Y E I W + G A + V+ +D K Y+ +N+CA G C YTQVVWR + +GCA+ C +N + F+ICNY+PRGN+ G PY Sbjct: 27 SENSPQDYLTPQNSARAAVGVGPVTWSTKLQQFAEKYAAQRAGDCRLQH-SGGPYGENIFWGSAGFDWKAVDAVRSWVDEKQWYNYATNSCAA-GKVCGHYTQVVWRATTSIGCARVVCRDNRGV-FIICNYEPRGNIAGMKPY 167
BLAST of CN182290 vs. ExPASy Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.515e-24 Identity = 63/136 (46.32%), Postives = 79/136 (58.09%), Query Frame = -3 Query: 174 AHNKPEDYLKAHNEARASVGIGPMSWVYKLADYSHKHAQKLKGNCNLKKPQVSKYSETIAWSNQGKITATEFVKMCMDGKPLYDDNSNTCALNGTKCAIYTQVVWRNSVRLGCAKERCNNNGTLNFVICNYDPRGN 581 A E++L AHN AR VG+GPM+W LA Y+ +A + +C + Y E +A + ++ A VKM D K YD NSNTCA G C YTQVVWR SVRLGCA+ RCN+ F+ CNYDP GN Sbjct: 21 AQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSD-GPYGENLAAAFP-QLNAAGAVKMWDDEKQWYDYNSNTCA-PGKVCGHYTQVVWRKSVRLGCARVRCNSGWV--FITCNYDPPGN 151
BLAST of CN182290 vs. ExPASy Swiss-Prot
Match: ST14_SOLTU (STS14 protein OS=Solanum tuberosum GN=STS14 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.079e-20 Identity = 49/140 (35.00%), Postives = 75/140 (53.57%), Query Frame = -3 Query: 153 EDYLKAHNEARASVGIGPMSWVYKLADYSHK--HAQKLKGNCNLKKPQVSKYSETIAWSNQGKITATEFVKMCMDGKPLYDDNSNTCALNGTKCAIYTQVVWRNSVRLGCAKERCNNNGTLNFVICNYDPRGNVFGQNPY 566 +++L AHN+AR+ VG+GP++W LA + Q+ K NC+ KY W++ +T V + K Y+ +N+C KC +YTQ+VW+ S+ LGCA+ C G +C Y+P GNV G+ PY Sbjct: 77 QEFLDAHNKARSEVGVGPLTWSPMLAKETSLLVRYQRDKQNCSFANLSNGKYGGNQLWASGTVVTPRMAVDSWVAEKKFYNYENNSCT-GDDKCGVYTQIVWKKSIELGCAQRTC-YEGPATLTVCFYNPPGNVIGEKPY 214
BLAST of CN182290 vs. ExPASy Swiss-Prot
Match: PR1_MEDTR (Pathogenesis-related protein PR-1 OS=Medicago truncatula GN=PR-1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.206e-18 Identity = 50/137 (36.50%), Postives = 77/137 (56.20%), Query Frame = -3 Query: 153 YLKAHNEARASVGIGPMSWVYKLADYSHKHAQKLKGNCNLKKPQVSKYSETIAWSNQGKITATEFVKMCMDGKPLYDDNSNTCALNGTKCAIYTQVVWRNSVRLGCAKERCNNN-GTLNFVICNYDPRGNVFGQNPY 560 +L N ARA+VG+ P+ W KL Y+ +A + + +C L+ Y E I W + + V +D K Y+ N+C ++G C YTQVVW ++ ++GCA C+++ GT F+ CNYDP GN +G+ PY Sbjct: 41 FLIPQNIARAAVGLRPLVWDDKLTHYAQWYANQRRNDCALEHSN-GPYGENIFWGSGVGWNPAQAVSAWVDEKQFYNYWHNSC-VDGEMCGHYTQVVWGSTTKVGCASVVCSDDKGT--FMTCNYDPPGNYYGERPY 173
BLAST of CN182290 vs. ExPASy Swiss-Prot
Match: GPRL1_BOVIN (GLIPR1-like protein 1 OS=Bos taurus GN=GLIPR1L1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.385e-12 Identity = 51/152 (33.55%), Postives = 76/152 (50.00%), Query Frame = -3 Query: 153 EDYLKAHNEARASVG-----IGPMSWVYKLADYSHKHAQKLK---GNCNLKKPQVS---KYSETIAWSNQGKITATEF-VKMCMDGKPLYDDNSNTCALNGTKCAIYTQVVWRNSVRLGCAKERCNNNGTLN--FVICNYDPRGNVFGQNPY 566 E+ L+ HNEAR +V + MSW LA + A+K K +C+ K + +Y+ W I+A +F + M D + YD N+ +C+ C YTQVVW S ++GCA C N G+ + ++CNY P GN +PY Sbjct: 36 EECLRLHNEARTNVSPPAADMKYMSWDEALAKTAEAWAKKCKFIHNSCSSKSFKCHPTFQYAGENLWLGPLTISAAKFAINMWYDERKFYDFNTRSCS---QVCGHYTQVVWAYSYKVGCAVAVCPNLGSPDSALLVCNYAPAGNYPNMSPY 184 The following BLAST results are available for this feature:
BLAST of CN182290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182290 ID=CN182290; Name=CN182290; organism=Citrus sinensis; type=EST; length=583bpback to top |