CN182287

Overview
NameCN182287
Unique NameCN182287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_DIACA (Chalcone--flavonone isomerase OS=Dianthus caryophyllus GN=CHI PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.157e-59
Identity = 117/169 (69.23%), Postives = 141/169 (83.43%), Query Frame = -2
Query:  160 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 663
            KFT I VY+E++AV  LA KWKGKTA+ELT+SV+FF+D+VTGPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAE++A +KF  VFK+   PPG+SILFTQS  GSLTISFSKDGS+P++G  VI N  LSEAVL+S+IGK+GVSP AKKSL+ R+S L+N
Sbjct:   45 KFTAIAVYIEDDAVSSLAVKWKGKTADELTDSVDFFKDIVTGPFEKFTQVTMILPLTGQQYSEKVVENCVAHWKSVGTYTDAESEATQKFLQVFKNVSNPPGASILFTQSPLGSLTISFSKDGSLPENGKEVIVNKQLSEAVLQSIIGKHGVSPEAKKSLSARLSDLIN 213          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_ALLCE (Chalcone--flavonone isomerase OS=Allium cepa GN=CHI PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.157e-59
Identity = 112/168 (66.67%), Postives = 136/168 (80.95%), Query Frame = -2
Query:  160 FTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 660
            FT IG+YLE +++PFLA KWKGKT EEL  S++FFRD+ TGPFEKF  VTMILPLTG QYSEKV ENC+A WK  GIYTDAEA A++KF   FK E FPPGSSILFT + SG+L I+FSKDGS+ KD   +IEN  L++AVLES+IG++GVSPAAK S+A R+S ++N
Sbjct:   46 FTAIGIYLETDSIPFLADKWKGKTGEELAGSLDFFRDICTGPFEKFTNVTMILPLTGEQYSEKVTENCVAYWKAIGIYTDAEASAVDKFKQAFKPESFPPGSSILFTHTPSGTLKIAFSKDGSVSKDEGVLIENKALTQAVLESIIGEHGVSPAAKLSIASRLSEIMN 213          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_IPOPU (Chalcone--flavonone isomerase OS=Ipomoea purpurea GN=CHI PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.511e-59
Identity = 115/167 (68.86%), Postives = 137/167 (82.04%), Query Frame = -2
Query:  166 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 663
            KFT IGVYLE +AVP LA KW GK+ EELT+SV+FFRD+VTGPFEK  ++TMILPL+G QYSEKV ENC+A WK  G+Y DAE+KAI+KF  VF D++FPPG+SI FTQS  GSLT+SFSKDGS+P+   AVIEN  LSEAVLES+IG  GVSP AK+SLA R+S +
Sbjct:   48 KFTAIGVYLEADAVPSLAVKWNGKSVEELTDSVQFFRDIVTGPFEKLTRITMILPLSGKQYSEKVTENCVAFWKAAGMYGDAESKAIDKFNDVFSDQMFPPGASIFFTQSPLGSLTVSFSKDGSMPEIASAVIENKPLSEAVLESIIGSKGVSPEAKQSLAVRLSEM 214          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI3_SOYBN (Chalcone--flavonone isomerase 3 OS=Glycine max GN=CHI3 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.973e-59
Identity = 120/167 (71.86%), Postives = 140/167 (83.83%), Query Frame = -2
Query:  166 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 663
            KFT I VYL+ +A+ FL+ KWK K+  +LTES +FF D+VTGPFEKFM+VTMI PLTG QYSEKVAENC+AIW+  GIYTD+EA+AI+KF +VFKD  FPPGSSILFT S +GSLTISFS D +IP+   AVIEN LLSEAVLESMIGKNGVSPAAK+SLA R+S L
Sbjct:   47 KFTAICVYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILFTVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMIGKNGVSPAAKQSLASRLSHL 213          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI2A_SOYBN (Chalcone--flavonone isomerase 2-A OS=Glycine max GN=CHI2-A PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.577e-59
Identity = 119/167 (71.26%), Postives = 140/167 (83.83%), Query Frame = -2
Query:  166 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 663
            KFT I +YL+ +A+ FL+ KWK K+  +LTES +FF D+VTGPFEKFM+VTMI PLTG QYSEKVAENC+AIW+  GIYTD+EA+AI+KF +VFKD  FPPGSSILFT S +GSLTISFS D +IP+   AVIEN LLSEAVLESMIGKNGVSPAAK+SLA R+S L
Sbjct:   47 KFTAICIYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILFTVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMIGKNGVSPAAKQSLASRLSHL 213          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_EUSGR (Chalcone--flavonone isomerase OS=Eustoma grandiflorum GN=CHI PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 5.740e-59
Identity = 113/168 (67.26%), Postives = 134/168 (79.76%), Query Frame = -2
Query:  160 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 663
            KFT IG+YL+E A+P+LAGKWKGKTAEEL +SV+FF D++TGPFEKF +VT+ILPLTG QYS KV+ENC A WK  G+YT A+ KAIEKF  VF+ + F PG SILF  S  SLTISF K G IP+   AVIEN  LSEAV+ES+IG+ GVSPAAKKSLA RI+ +LN
Sbjct:   48 KFTAIGIYLDETAIPWLAGKWKGKTAEELADSVDFFADIITGPFEKFTQVTLILPLTGQQYSGKVSENCTAQWKAAGVYTPADGKAIEKFLQVFEPQSFSPGDSILFMHSPESLTISFGKAGDIPETSNAVIENKKLSEAVIESVIGEKGVSPAAKKSLATRIAHVLN 215          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_VERHY (Chalcone--flavonone isomerase OS=Verbena hybrida GN=CHI PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 7.497e-59
Identity = 118/168 (70.24%), Postives = 137/168 (81.55%), Query Frame = -2
Query:  163 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 663
            KFT IGVYLE +AV  LA KWKGKTAEE+ +S +FF ++VTGPFEKF KVT ILPLTG QYSEKV ENC+A WK  G +TDAE +A +KF  VFK+E+F PG+SILFTQS  GSLTISFSKDGSIP+   A+IEN  LSEAVLES+IGK GVSP+AK+SLA R+S LL
Sbjct:   48 KFTAIGVYLENDAVTSLAAKWKGKTAEEVADSGDFFAEIVTGPFEKFTKVTTILPLTGQQYSEKVVENCVAYWKAIGKFTDAEDEATKKFLQVFKNEMFHPGASILFTQSPQGSLTISFSKDGSIPEKENAIIENKQLSEAVLESIIGKKGVSPSAKQSLAARLSDLL 215          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_RAPSA (Chalcone--flavonone isomerase OS=Raphanus sativus GN=CHI PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 7.497e-59
Identity = 115/167 (68.86%), Postives = 137/167 (82.04%), Query Frame = -2
Query:  163 FTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 660
            FT IGVYL+  +VP L+ KW+GKT EELTESV FFR++V G FEKF+KVTM LPLTG QYSEKV ENC+AIWK  GIYTD+EAKA+E+F  VFKDE FPPG+SILF  S  GSLT++FSKD SIP+ G AVIEN LL+EAVLES+IGKN VSP A+  +AER++ L+
Sbjct:   55 FTVIGVYLDPVSVPSLSVKWEGKTTEELTESVPFFREIVIGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKSLGIYTDSEAKAVERFLEVFKDETFPPGASILFALSPEGSLTVAFSKDDSIPETGKAVIENKLLAEAVLESIIGKNRVSPGARLRVAERLAQLM 221          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_SAUME (Chalcone--flavonone isomerase OS=Saussurea medusa GN=CHI PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.849e-58
Identity = 113/174 (64.94%), Postives = 138/174 (79.31%), Query Frame = -2
Query:  145 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDK 663
            KFT IGVYLE+ A+P LA KWKGKTA ELT+SV+F+RD+VTGPFEKF +VTMILPLTG QYSEKV+E C+ +WK  G YTDA+   IEKF  VFKDE F PGSSILFT S +GSLTISFSKDG+IP+    V+EN  L++ V+ES+IG++GVSP AK+SLA R+S  +    +K
Sbjct:   48 KFTGIGVYLEDKAIPSLAVKWKGKTAAELTDSVQFYRDIVTGPFEKFSQVTMILPLTGKQYSEKVSEMCIGVWKAQGTYTDADTATIEKFLEVFKDENFLPGSSILFTTSPTGSLTISFSKDGNIPEAATVVLENRKLAQTVIESVIGEHGVSPEAKQSLASRLSDFMTQFDEK 221          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_CALCH (Chalcone--flavonone isomerase (Fragment) OS=Callistephus chinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.849e-58
Identity = 115/168 (68.45%), Postives = 134/168 (79.76%), Query Frame = -2
Query:  163 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 663
            KFT IGVYLE+ A+P LA K KGKT  EL +SVEFFRD+VTGPFEKF +VTMILPLTG QYSEKV+E C+ +WK  G YTDA+   IEKF  VFKDE F PGSSILFT S  GSLTISFSKDG+IP+    V+EN  L++AV+ES+IGKNGVSPA K+SLA R+S L+
Sbjct:   48 KFTGIGVYLEDKAIPLLAAKRKGKTVAELLDSVEFFRDIVTGPFEKFTQVTMILPLTGKQYSEKVSEMCVGVWKALGTYTDADGTTIEKFLEVFKDENFLPGSSILFTTSPLGSLTISFSKDGTIPEAANVVLENEKLAQAVIESVIGKNGVSPATKQSLASRLSDLM 215          
The following BLAST results are available for this feature:
BLAST of CN182287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_DIACA1.157e-5969.23Chalcone--flavonone isomerase OS=Dianthus caryophy... [more]
CFI_ALLCE1.157e-5966.67Chalcone--flavonone isomerase OS=Allium cepa GN=CH... [more]
CFI_IPOPU1.511e-5968.86Chalcone--flavonone isomerase OS=Ipomoea purpurea ... [more]
CFI3_SOYBN1.973e-5971.86Chalcone--flavonone isomerase 3 OS=Glycine max GN=... [more]
CFI2A_SOYBN2.577e-5971.26Chalcone--flavonone isomerase 2-A OS=Glycine max G... [more]
CFI_EUSGR5.740e-5967.26Chalcone--flavonone isomerase OS=Eustoma grandiflo... [more]
CFI_VERHY7.497e-5970.24Chalcone--flavonone isomerase OS=Verbena hybrida G... [more]
CFI_RAPSA7.497e-5968.86Chalcone--flavonone isomerase OS=Raphanus sativus ... [more]
CFI_SAUME2.849e-5864.94Chalcone--flavonone isomerase OS=Saussurea medusa ... [more]
CFI_CALCH2.849e-5868.45Chalcone--flavonone isomerase (Fragment) OS=Callis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002D14_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002D14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182287 ID=CN182287; Name=CN182287; organism=Citrus sinensis; type=EST; length=664bp
GGAGCTCTAGCTCTCACAAAGGCAACACAACTGAGAGTCCATAGGAAAGG
ACACTAATTTAACATTAAAGAAAAAAAAGTTTGCCAATTTAACAACTCTG
CCTTCGCTTATTATTTGGCAAACTTTTCAACTTCTTCATTTCATCTTATC
ACTAGTTACATTCAACAGTGCTGATATTCTTTCAGCCAAACTCTTCTTTG
CTGCAGGAGAAACACCATTCTTGCCGATCATCGACTCCAGTACTGCCTCA
GAAAGCAGATTATTCTCTATTACCGCAACACCATCTTTCGGTATTGAACC
GTCTTTGGAGAAGCTGATAGTCAATGATCCTGATGATTGAGTAAAGAGAA
TTGAGGATCCTGGTGGGAAAATTTCATCCTTGAAGACCGCAGTGAATTTT
TCAATAGCTTTGGCTTCAGCATCTGTGTAAATTCCAAAAAACTTCCATAT
GGCCATGCAATTTTCGGCAACCTTCTCTGAGTATTGTGCACCAGTTAATG
GCAAGATCATTGTCACCTTCATGAATTTCTCAAAGGGACCTGTGACGACG
TCTCTGAAGAACTCAACGGATTCCGTCAACTCCTCCGCAGTCTTCCCCTT
CCATTTGCCGGCGAGAAACGGCACGGCGTTCTCCTCCAAGTACACTCCTA
TCGGCGTGAACTTC
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