CN182287

Overview
NameCN182287
Unique NameCN182287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI2_PETHY (Chalcone--flavonone isomerase B OS=Petunia hybrida GN=CHI2 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.042e-56
Identity = 116/167 (69.46%), Postives = 135/167 (80.84%), Query Frame = -2
Query:  166 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 663
            KFT IGVYLEE+AV FLA KWKGK+AEEL  SV+FFRD+VTGPFEKF +V  ILPLTG Q+SEKVAENC+A WK  G Y+DA ++AIEKF  V K E F PG+SILFTQS  GSLTISF+KD SI + G AVIEN   SEAVLE++IG++GVSPAAK S+A R+S L
Sbjct:   48 KFTVIGVYLEESAVQFLAPKWKGKSAEELIHSVDFFRDIVTGPFEKFTRVRFILPLTGKQFSEKVAENCVAHWKATGTYSDAGSRAIEKFLNVVKSETFLPGASILFTQSPLGSLTISFTKDDSISEAGNAVIENKQFSEAVLETIIGEHGVSPAAKCSIAARMSEL 214          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_MAIZE (Chalcone--flavonone isomerase OS=Zea mays GN=CHI PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.940e-56
Identity = 113/168 (67.26%), Postives = 127/168 (75.60%), Query Frame = -2
Query:  163 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 663
            KFT IGVYLE+ AVP LA KW GKTA+EL     FFRDVVTG FEKF +VTMILPLTG QY+EKV ENC+A WK  G+YTDAE  A+EKF  VFK E F PG SILFT S +G LT++FSKD S+P  G   IEN  L EAVLES+IG+ GVSPAAK SLA R+S LL
Sbjct:   44 KFTAIGVYLEDAAVPALAKKWGGKTADELASDAAFFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWKAAGLYTDAEGVAVEKFREVFKPETFAPGRSILFTHSPAGVLTVAFSKDSSVPAAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELL 211          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_ORYSJ (Chalcone--flavonone isomerase OS=Oryza sativa subsp. japonica GN=CHI PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.239e-53
Identity = 111/175 (63.43%), Postives = 130/175 (74.29%), Query Frame = -2
Query:  151 KFTPIGVYLEENA-VPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGV--AVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTS 663
            KFT IGVYLEE A VP LA KW GK+A+EL     FFRDVVTG FEKF +VTMILPLTG QYS+KV ENC+A WK  G+YTDAE  A +KF   FK   FPPG+SILFT S  G LT++FSKD S+P+  V  A IEN  L EAVL+S+IG++GVSPAAK+S+A R+S LL   S
Sbjct:   45 KFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAES 219          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_ORYSI (Chalcone--flavonone isomerase OS=Oryza sativa subsp. indica GN=CHI PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.239e-53
Identity = 111/175 (63.43%), Postives = 130/175 (74.29%), Query Frame = -2
Query:  151 KFTPIGVYLEENA-VPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGV--AVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTS 663
            KFT IGVYLEE A VP LA KW GK+A+EL     FFRDVVTG FEKF +VTMILPLTG QYS+KV ENC+A WK  G+YTDAE  A +KF   FK   FPPG+SILFT S  G LT++FSKD S+P+  V  A IEN  L EAVL+S+IG++GVSPAAK+S+A R+S LL   S
Sbjct:   45 KFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAES 219          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.788e-52
Identity = 102/168 (60.71%), Postives = 131/168 (77.98%), Query Frame = -2
Query:  163 FTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQ--SSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 660
            FT IGVYLE+ AV  L  KWKGKTA++L  + +FFRD+ TGPFEKF ++TM+ PL+G QYSEKV ENC+A WK  G YT+AEA A+EKF    K+E FPPG+SILFT   S  SLTI+F ++GS+P+ G  VIE+  LSEA+LES+IGK+GVSP AK+S+A+R+S +L
Sbjct:   50 FTAIGVYLEDLAVSTLGPKWKGKTADDLAGNSDFFRDIFTGPFEKFTRITMVKPLSGQQYSEKVEENCVAHWKAAGTYTEAEAAAVEKFKEACKNETFPPGTSILFTHQVSPASLTITFWREGSMPETGNTVIESKALSEAILESIIGKHGVSPGAKRSVAQRLSEIL 217          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI2_ARATH (Chalcone--flavonone isomerase 2 OS=Arabidopsis thaliana GN=CHI2 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.336e-52
Identity = 109/167 (65.27%), Postives = 128/167 (76.65%), Query Frame = -2
Query:  160 TPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFT-QSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 657
            T IGVYLE  A+P ++ KWKGK A+ELTESV FFR +VTG FEK  +VTM   LTG QYSEKV ENC  I K  G YT +EAKAI++F  VFK++ FPPGSSI+F     GSLTI+FSK+  +PK G AVI+N LL EAVLESMIGKNGVSPA +KSLAER+S L+N
Sbjct:   41 TVIGVYLEAMALPSISAKWKGKNAKELTESVPFFRQLVTGEFEKLARVTMKKRLTGIQYSEKVVENCEEIMKASGKYTRSEAKAIDQFLMVFKNQDFPPGSSIIFAICPKGSLTIAFSKEERVPKTGKAVIKNKLLGEAVLESMIGKNGVSPATRKSLAERLSKLMN 207          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_HORVU (Chalcone--flavonone isomerase OS=Hordeum vulgare GN=CHI PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.977e-51
Identity = 106/169 (62.72%), Postives = 126/169 (74.56%), Query Frame = -2
Query:  163 KFTPIGVYLEENA-VPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 663
            KFT IGVYL+ +A V  LA KW GK A +L     FFRDVVTG FEKF +VTMILPLTGAQYS+KV ENC+A WK  G+YTDAEA A++KF   F    F PG+SILFT S +G LT++FSKD S+P+ G   IEN  L EAVLES+IG++GVSPAAK SLA R++ LL
Sbjct:   44 KFTAIGVYLQADAAVSALAAKWAGKPAADLASDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGVYTDAEAAAVDKFKEAFGPHSFAPGASILFTHSPAGVLTVAFSKDSSVPESGGVAIENARLCEAVLESIIGEHGVSPAAKLSLANRVAELL 212          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI1A_SOYBN (Chalcone--flavonone isomerase 1A OS=Glycine max GN=CHI1A PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.016e-47
Identity = 96/169 (56.80%), Postives = 126/169 (74.56%), Query Frame = -2
Query:  160 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 663
            KFT IGVYLE+ AVP LA KWKGKT+EEL  ++ F+RD+++GPFEK ++ + ILPL GA+YS+KV ENC+A  K  G Y DAEA AIEKF   FK+  F PG+S+ + QS  G L +SFS+D +IP+   AVIEN  +S AVLE+MIG++ VSP  K+SLA R+ A+L+
Sbjct:   45 KFTGIGVYLEDKAVPSLAAKWKGKTSEELVHTLHFYRDIISGPFEKLIRGSKILPLAGAEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFAPGASVFYRQSPDGILGLSFSEDATIPEKEAAVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLS 213          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_PUELO (Chalcone--flavonone isomerase OS=Pueraria lobata GN=CHI PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.278e-46
Identity = 93/169 (55.03%), Postives = 126/169 (74.56%), Query Frame = -2
Query:  160 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 663
            KFT IGVYLE+ AV  LA KWKGK +EEL E+++F+RD+++GPFEK ++ + ILPL+G +YS+KV ENC+A  K  G Y DAEA AIEKF   FK+  F PG+++ + QS  G L +SFS+D +IP +  AVIEN  +S AVLE+MIG++ VSP  K+SLA R+ A+L+
Sbjct:   51 KFTGIGVYLEDKAVSSLAAKWKGKPSEELVETLDFYRDIISGPFEKLIRGSKILPLSGVEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFQPGATVFYRQSPDGVLGLSFSEDVTIPDNEAAVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLS 219          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_PHAVU (Chalcone--flavonone isomerase OS=Phaseolus vulgaris GN=CHI PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 3.612e-45
Identity = 92/169 (54.44%), Postives = 122/169 (72.19%), Query Frame = -2
Query:  160 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 663
            KFT IGVYLE+ AV  LA KWKGK +EEL  +++F+RD+++GPFEK ++ + IL L+G +YS KV ENC+A  K  G Y DAEAK IE+F   FK   FPPG+S+ + QS  G L +SFS+D +IP +   VIEN  +S AVLE+MIG++ VSP  K+SLA R+ A+LN
Sbjct:   48 KFTAIGVYLEDKAVASLATKWKGKPSEELINTLDFYRDIISGPFEKLIRGSKILQLSGTEYSRKVMENCVAHLKSVGTYGDAEAKGIEEFAEAFKKVNFPPGASVFYRQSPDGILGLSFSEDATIPGEEAVVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLN 216          
The following BLAST results are available for this feature:
BLAST of CN182287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI2_PETHY2.042e-5669.46Chalcone--flavonone isomerase B OS=Petunia hybrida... [more]
CFI_MAIZE5.940e-5667.26Chalcone--flavonone isomerase OS=Zea mays GN=CHI P... [more]
CFI_ORYSJ1.239e-5363.43Chalcone--flavonone isomerase OS=Oryza sativa subs... [more]
CFI_ORYSI1.239e-5363.43Chalcone--flavonone isomerase OS=Oryza sativa subs... [more]
CFI_CANGE1.788e-5260.71Chalcone--flavonone isomerase OS=Canna generalis G... [more]
CFI2_ARATH2.336e-5265.27Chalcone--flavonone isomerase 2 OS=Arabidopsis tha... [more]
CFI_HORVU1.977e-5162.72Chalcone--flavonone isomerase OS=Hordeum vulgare G... [more]
CFI1A_SOYBN1.016e-4756.80Chalcone--flavonone isomerase 1A OS=Glycine max GN... [more]
CFI_PUELO7.278e-4655.03Chalcone--flavonone isomerase OS=Pueraria lobata G... [more]
CFI_PHAVU3.612e-4554.44Chalcone--flavonone isomerase OS=Phaseolus vulgari... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002D14_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002D14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182287 ID=CN182287; Name=CN182287; organism=Citrus sinensis; type=EST; length=664bp
GGAGCTCTAGCTCTCACAAAGGCAACACAACTGAGAGTCCATAGGAAAGG
ACACTAATTTAACATTAAAGAAAAAAAAGTTTGCCAATTTAACAACTCTG
CCTTCGCTTATTATTTGGCAAACTTTTCAACTTCTTCATTTCATCTTATC
ACTAGTTACATTCAACAGTGCTGATATTCTTTCAGCCAAACTCTTCTTTG
CTGCAGGAGAAACACCATTCTTGCCGATCATCGACTCCAGTACTGCCTCA
GAAAGCAGATTATTCTCTATTACCGCAACACCATCTTTCGGTATTGAACC
GTCTTTGGAGAAGCTGATAGTCAATGATCCTGATGATTGAGTAAAGAGAA
TTGAGGATCCTGGTGGGAAAATTTCATCCTTGAAGACCGCAGTGAATTTT
TCAATAGCTTTGGCTTCAGCATCTGTGTAAATTCCAAAAAACTTCCATAT
GGCCATGCAATTTTCGGCAACCTTCTCTGAGTATTGTGCACCAGTTAATG
GCAAGATCATTGTCACCTTCATGAATTTCTCAAAGGGACCTGTGACGACG
TCTCTGAAGAACTCAACGGATTCCGTCAACTCCTCCGCAGTCTTCCCCTT
CCATTTGCCGGCGAGAAACGGCACGGCGTTCTCCTCCAAGTACACTCCTA
TCGGCGTGAACTTC
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