CN182280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182280 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.672e-24 Identity = 58/101 (57.43%), Postives = 67/101 (66.34%), Query Frame = -1 Query: 173 TFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXGNVFMHSE-HAPL-SNDY 469 TFGLVYTVYATA DPKKG +G IAP+AIG IVGANIL G F G SMNPA SFGPAV S + ++W+YWV +F+ S H PL SND+ Sbjct: 152 TFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVVSWIWTNHWVYWVGPFIGAAIAAIVYDTIFIGSNGHEPLPSNDF 252
BLAST of CN182280 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.852e-24 Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = -1 Query: 260 TFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 469 TFGLVY VY+T DPK+GSLG IAP+AIG IVGANIL GPFSG SMNPAR+FGPA+ + D+WIYWV Sbjct: 160 TFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWRWHDHWIYWV 229
BLAST of CN182280 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.025e-23 Identity = 47/70 (67.14%), Postives = 56/70 (80.00%), Query Frame = -1 Query: 260 TFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 469 TF LVY VY+TA DPK+GS+G IAP+AIG IVGANIL GPF G SMNPAR+FGPA+ + ++WIYWV Sbjct: 160 TFALVYVVYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWRWSNHWIYWV 229
BLAST of CN182280 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 7.767e-22 Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = -1 Query: 260 TFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 469 TFG VY YAT DPK+G LGTIAP+A+GF++GAN+LA GPF G MNPAR FGPA+ ++ +W+YW+ Sbjct: 161 TFGFVYAYYATVVDPKRGHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWL 230
BLAST of CN182280 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.730e-21 Identity = 41/70 (58.57%), Postives = 55/70 (78.57%), Query Frame = -1 Query: 260 TFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 469 TFGL+Y YAT DPK+G +GTIAP+A+GF++GAN+LA GPF G MNPAR FGPA+ ++ +W+YW+ Sbjct: 156 TFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWL 225
BLAST of CN182280 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.952e-21 Identity = 41/70 (58.57%), Postives = 55/70 (78.57%), Query Frame = -1 Query: 260 TFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 469 TFGL+Y YAT DPK+G +GTIAP+A+GF++GAN+LA GPF G MNPAR FGPA+ ++ +W+YW+ Sbjct: 157 TFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWL 226
BLAST of CN182280 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.465e-20 Identity = 44/70 (62.86%), Postives = 55/70 (78.57%), Query Frame = -1 Query: 260 TFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 469 TFGLVYTVYATA D + G G IAP+AIG + GANILA GPF G +MNPAR+FGPA+ N++ +W+YW+ Sbjct: 159 TFGLVYTVYATAVDRRSGG-GDIAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWNWRHHWVYWL 227
BLAST of CN182280 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.913e-20 Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 176 TFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXGNVFM-HSEHAPLSND 469 TF L++ VYAT DP++ ++G + P+ +G +VGAN+LA GPFSG SMNPARSFGPA+ +G + D+W+YWV +FM H PL D Sbjct: 151 TFSLLFAVYATVVDPRR-AVGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAGVWADHWVYWVGPLIGGPLAGLVYDGLFMAQGGHEPLPRD 248
BLAST of CN182280 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.262e-20 Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = -1 Query: 260 TFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 469 TFGL+YTVY TA DPK+G++ IAP+AIG IVGANIL GPF G MNPA +FGP++ + +WI+WV Sbjct: 152 TFGLMYTVYGTAIDPKRGAVSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWQWHQHWIFWV 221
BLAST of CN182280 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.240e-19 Identity = 41/70 (58.57%), Postives = 56/70 (80.00%), Query Frame = -1 Query: 260 TFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 469 TF L++ VYAT D ++ ++G + P+ +G +VGANILA GP+SG SMNPARSFGPA+A+G + D+WIYWV Sbjct: 150 TFSLLFAVYATVVDRRR-AVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWV 218 The following BLAST results are available for this feature:
BLAST of CN182280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182280 ID=CN182280; Name=CN182280; organism=Citrus sinensis; type=EST; length=526bpback to top |