CN188918

Overview
NameCN188918
Unique NameCN188918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI1_KLEP3 (Sulfite reductase [NADPH] hemoprotein beta-component 1 OS=Klebsiella pneumoniae (strain 342) GN=cysI1 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.185e-33
Identity = 80/201 (39.80%), Postives = 113/201 (56.22%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            EPI G  +LPRKFK  V +P  N +D+  ND+  V ++ ENG+  GFNL VGGG+   H  + T+ R   + GY+P E  L   +A+V TQR+ G R DRK ++ KY +   G+E F++ VE+  G KFEP R          +GW +  D      L ++NGRI    G+  KT L EI + +    RIT NQN+I+  +
Sbjct:  204 EPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIA-ENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGEFRITANQNLIVASV 403          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_VIBFM (Sulfite reductase [NADPH] hemoprotein beta-component OS=Vibrio fischeri (strain MJ11) GN=cysI PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.079e-33
Identity = 77/201 (38.31%), Postives = 115/201 (57.21%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            EPI G+ +LPRKFK  V +P  N VD+  ND+  + ++D NG+  GFN+ VGGG+  TH    T+PR  +  G+VP +  L    A+V TQR+ G R +RK ++ KY +   G + F++ VE+  G +FE  R     E    +GW E  DG     L ++NGR+    GK  KT + EI + +  + R+T NQN+I+  +
Sbjct:  208 EPILGSNYLPRKFKTTVVIPPQNDVDVHANDLNFIAIAD-NGKLVGFNVLVGGGLAMTHGDTATYPRKADDFGFVPLKKTLEVAAAVVTTQRDWGNRSNRKNAKTKYTLDRVGSDVFKAEVEKRAGVQFEESRPYELTERGDRIGWVEGIDGKHHLALFIENGRLLDYPGKPLKTGVAEIAKVHQGDFRMTANQNLIVAGV 407          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_SHEAM (Sulfite reductase [NADPH] hemoprotein beta-component OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=cysI PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.079e-33
Identity = 77/201 (38.31%), Postives = 115/201 (57.21%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            EP+ G  +LPRKFK  V +P  N VD+  ND+  V ++ ENG+  GFN+ VGGG+  TH  ++T+PR  E LG++  E +L   + +V  QR+ G R +RK ++ KY +   G++ F+S VEQ  G  F P R           GW E  DG     L ++NGR+    GK  KT + EI + +  ++R+T NQN+I+  +
Sbjct:  205 EPVLGDSYLPRKFKTTVVIPPHNDVDVHANDLNFVAIA-ENGQLVGFNVLVGGGLAMTHGDKSTYPRRAEDLGFIGLEHVLKVAEHVVTVQRDYGDRVNRKNAKTKYTLDRIGVDAFKSEVEQRVGVAFGPSRPYEFTHRGDRFGWVEGIDGKHHLTLFIENGRLLDYPGKPLKTGVAEIAKVHKGDLRMTANQNLIIAGV 404          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_MYXXD (Sulfite reductase [NADPH] hemoprotein beta-component OS=Myxococcus xanthus (strain DK 1622) GN=cysI PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.079e-33
Identity = 75/201 (37.31%), Postives = 111/201 (55.22%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGKMKKT----LREIIEKYNLNVRITPNQNIILCDI 654
            EPIYG  +LPRKFK AV VP  N VD+   D+G + +  E     GFN+ VGGGMG TH    T+PRL + +G++P E  L   + +V   R+ G R +RK++R+KY++   G+  F + +E+  G   +P R           GW E  DG     LH+D+GR+A +        LREI   +  + R+T NQN+++  +
Sbjct:  196 EPIYGATYLPRKFKAAVAVPPLNDVDVFAQDLGFIAII-EGDALVGFNVSVGGGMGATHGDAATYPRLADVVGFIPPEQTLAVAEEVVKIHRDFGDRTNRKHARLKYVLEERGVPWFTAELEKRLGFPLQPARPFAFEHNGDRFGWTEGHDGRWHLTLHLDSGRVADRPGAPHLTGLREIARIHTGDFRLTANQNLVIAGV 395          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_VIBF1 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=cysI PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.055e-32
Identity = 77/201 (38.31%), Postives = 114/201 (56.72%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            EPI G+ +LPRKFK  V +P  N VD+  ND+  + ++D NG+  GFN+ VGGG+  TH    T+PR  +  G+VP +  L    A+V TQR+ G R +RK ++ KY +   G + F+  VE+  G +FE  R     E    +GW E  DG     L ++NGR+    GK  KT + EI + +  + R+T NQN+I+  +
Sbjct:  208 EPILGSNYLPRKFKTTVVIPPQNDVDVHANDLNFIAIAD-NGKLVGFNVLVGGGLAMTHGDTATYPRKADDFGFVPLDKTLDVAAAVVTTQRDWGNRSNRKNAKTKYTLDRVGSDVFKGEVEKRAGVQFEKSRPYELTERGDRIGWVEGIDGKHHLALFIENGRLLDYPGKPLKTGVAEIAKVHQGDFRMTANQNLIVAGV 407          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_GEOKA (Sulfite reductase [NADPH] hemoprotein beta-component OS=Geobacillus kaustophilus GN=cysI PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.055e-32
Identity = 72/201 (35.82%), Postives = 114/201 (56.72%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAG----KMKKTLREIIEKYNLNVRITPNQNIILCDI 654
            EPIYG  +LPRKFK+ + VP  N VD+ + DIG + +  E+G+  GFN+ +GGGMG TH  +TT+P+L + +G+   + ++   + I+  QR+ G R  RK++R KY I   G+E  +  +E+  G +    R           GW E  +G     L V+ GR+      K+   LREI + +  + R+TPNQN+I+ ++
Sbjct:  206 EPIYGPTYLPRKFKIGIAVPPSNDVDVFSQDIGFIAIV-EDGKLAGFNVAIGGGMGMTHGDKTTYPQLAKVIGFCKPDQVVEVAEKIMTVQRDYGNRSSRKHARFKYTIDRLGLEAVKEEIERRLGWRLGEARPYHFEHSGDRYGWVEGVNGTWHFTLFVEGGRVKDYDDYKLMTGLREIAKVHTGDFRLTPNQNLIIANV 405          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_ALISL (Sulfite reductase [NADPH] hemoprotein beta-component OS=Aliivibrio salmonicida (strain LFI1238) GN=cysI PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.055e-32
Identity = 76/201 (37.81%), Postives = 116/201 (57.71%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            EPI G+ +LPRKFK  V +P  N VD+  ND+  + +++ NG+  GFN+ VGGG+  TH    T+PR  +  G+VP E  L    A+V TQR+ G R +RK ++ KY +   G++ F++ VE+  G +FE  R     E    +GW +  DG     L ++NGR+    GK  KT + EI + +  + R+T NQN+I+  +
Sbjct:  208 EPILGSNYLPRKFKTTVVIPPQNDVDVHANDLNFIAIAN-NGKLVGFNVLVGGGLAMTHGDTATYPRRADDFGFVPLEKTLEVAAAVVTTQRDWGNRSNRKNAKTKYTLDRVGVDVFKAEVEKRAGIQFEASRPYELTERGDRIGWVDGIDGKHHLALFIENGRLLDYPGKPLKTGVAEIAKIHQGDFRMTANQNLIVAGV 407          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_AERHH (Sulfite reductase [NADPH] hemoprotein beta-component OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=cysI PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.055e-32
Identity = 80/209 (38.28%), Postives = 114/209 (54.55%), Query Frame = 1
Query:   40 GTNFPDSPEPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            G       EPI G+ +LPRKFK  V +P  N VDI  ND+  V +SD +G+  GFN+ VGGG+  TH   +T+PR     G+VP   +L    A+V TQR+ G R +RK ++ KY +   G+E F++ VE   G +F P R           GW E  DG     L ++NGR+    GK  KT + EI + +  + R+T NQN+I+  +
Sbjct:  194 GEKLGGDEEPILGSNYLPRKFKTTVVIPPHNDVDIHANDLNFVAISD-HGKLVGFNVLVGGGLAMTHGDTSTYPRKASDFGFVPLSHVLEVAAAVVSTQRDWGNRVNRKNAKTKYTLERVGVEAFKAEVESRAGIQFGPVRPYEFTSRGDRFGWVEGIDGKHHLTLFIENGRLLDFPGKPLKTGMLEIAKVHQGDFRLTANQNLIIAGV 401          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_SALTI (Sulfite reductase [NADPH] hemoprotein beta-component OS=Salmonella typhi GN=cysI PE=3 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 1.378e-32
Identity = 80/206 (38.83%), Postives = 115/206 (55.83%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDIRKAWK 669
            EPI G  +LPRKFK  V +P  N +D+  ND+  V ++ ENG+  GFNL VGGG+   H  + T+ R   + GY+P E  L   +A+V TQR+ G R DRK ++ KY +   G+E F++ VE+  G  FEP R          +GW +  D      L ++NGRI    G+  KT L EI + +    RIT NQN+I+  + ++ K
Sbjct:  204 EPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIA-ENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQK 408          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_STAHJ (Sulfite reductase [NADPH] hemoprotein beta-component OS=Staphylococcus haemolyticus (strain JCSC1435) GN=cysI PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32
Identity = 73/202 (36.14%), Postives = 116/202 (57.43%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVV-VVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAG----KMKKTLREIIEKYNLNVRITPNQNIILCDI 654
            EP+YG ++LPRKFK+ + +P  N +D+ + DIG++ +V DE     GFN+ VGGGMG TH    T+P++G   G+VPKE ++   + I+  QR+ G R++RK +R KY +   G++K    +    G + E  R          LGW E   G     L + NGR+      ++K  LR+I E +  + R++PNQN+I+ ++
Sbjct:  206 EPMYGKKYLPRKFKIGIALPPSNDIDVYSQDIGLIGIVEDET--LVGFNVTVGGGMGMTHGNTDTYPQVGRLAGFVPKEQVVDVCEKILTIQRDYGNRENRKNARFKYTVDRLGVDKVVEELNTRLGWEIEEPRDFEFEHNGDRLGWIEGDKGVWNYTLFIQNGRVKDTEDYQLKTALRKIAETHTGDFRLSPNQNLIIANV 405          
The following BLAST results are available for this feature:
BLAST of CN188918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
CYSI1_KLEP36.185e-3339.80Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_VIBFM8.079e-3338.31Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_SHEAM8.079e-3338.31Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_MYXXD8.079e-3337.31Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_VIBF11.055e-3238.31Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_GEOKA1.055e-3235.82Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_ALISL1.055e-3237.81Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_AERHH1.055e-3238.28Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_SALTI1.378e-3238.83Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_STAHJ1.800e-3236.14Sulfite reductase [NADPH] hemoprotein beta-compone... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A16_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188918 ID=CN188918; Name=CN188918; organism=Citrus sinensis; type=EST; length=714bp
GAGGCTGAAGTGGTAAAGGCACGTAATGATAATTCTCATGGAACAAATTT
CCCTGATTCTCCTGAGCCCATCTATGGGACTCAGTTCTTGCCAAGGAAGT
TCAAAGTTGCAGTAACGGTGCCAACAGATAACTCGGTGGATATTCTTACT
AATGATATTGGTGTTGTTGTTGTTTCTGATGAAAATGGGGAACCTCAGGG
ATTCAACTTATATGTTGGTGGTGGTATGGGAAGAACGCATCGGTTGGAAA
CCACATTTCCCCGTCTTGGAGAACAGTTGGGCTATGTGCCAAAAGAGGAC
ATTCTATATGCTGTGAAAGCTATTGTTGTTACCCAAAGAGAAAATGGGAG
GAGAGATGATCGCAAGTATAGTAGAATGAAATATTTGATCAGCTCCTGGG
GAATTGAGAAGTTTAGAAGTGTTGTTGAGCAATATTATGGAAAGAAATTT
GAGCCTTTCCGTCAATTGCCAGAGTGGGAATTTAAAAGTCATTTGGGATG
GCATGAGCAGGGGGATGGTGGTTTATTTTGTGGACTTCATGTTGATAATG
GTCGTATTGCGGGTAAAATGAAGAAGACATTGAGGGAGATAATAGAGAAG
TATAACTTAAATGTGCGGATCACTCCTAACCAGAATATTATCTTGTGTGA
CATTCGTAAAGCATGGAAGCGTCCCCATCACTACAGCTCTCGCACAGGGT
GGACTGCTGCTTTC
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