CN188918

Overview
NameCN188918
Unique NameCN188918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_ERWCT (Sulfite reductase [NADPH] hemoprotein beta-component OS=Erwinia carotovora subsp. atroseptica GN=cysI PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32
Identity = 79/201 (39.30%), Postives = 113/201 (56.22%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            EPI G+ +LPRKFK  V VP  N VD+  ND+  V ++D NG   GFN+ VGGG+   H  + T+PR   +LGY+  E  L   +A+V TQR+ G R +RK ++ KY +   G++ F+  VE   G KFE  R     E    +GW +  D      L ++NGRI    G+  KT L EI + +  + R+T NQN+I+  +
Sbjct:  210 EPILGSTYLPRKFKTTVVVPPQNDVDLHANDLNFVAIAD-NGRLVGFNVLVGGGLSIAHGDKETYPRTASELGYISIEHTLAIAEAVVTTQRDWGNRTNRKNAKTKYTLERVGVDNFKQEVEARAGVKFEAVRPYEFTERGDRIGWVKGIDNKWHLTLFIENGRILDYPGRPLKTGLAEIAKIHKGDFRLTANQNLIVAGV 409          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_SALAR (Sulfite reductase [NADPH] hemoprotein beta-component OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=cysI PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.070e-32
Identity = 77/206 (37.38%), Postives = 113/206 (54.85%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI----AGKMKKTLREIIEKYNLNVRITPNQNIILCDIRKAWK 669
            EPI G  +LPRKFK  V +P  N +D+  ND+  V ++ ENG+  GFNL VGGG+   H  + T+ R   + G++P E  L   +A+V TQR+ G R DRK ++ KY +   G+E F++ VE+  G  FEP R          +GW +  D      L ++NGRI       +K  L EI + +    RIT NQN+I+  + ++ K
Sbjct:  204 EPILGQTYLPRKFKTTVVIPPQNDIDLHANDMSFVAIA-ENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGFLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKSGLLEIAKIHQGEFRITANQNLIVASVPESQK 408          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_DICZE (Sulfite reductase [NADPH] hemoprotein beta-component OS=Dickeya zeae (strain Ech1591) GN=cysI PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.009e-32
Identity = 76/201 (37.81%), Postives = 113/201 (56.22%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            EPI G  +LPRKFK  V +P  N VD+  ND+  V +SD NG+  GFN+ VGGG+   H  +TT+PR   +LGY+P    L   +A+V TQR+ G R +RK ++ KY +   G++ F+  VE+  G  FE  R          +GW +  D      L ++NGR+    G+  KT + EI + +  + R+T NQN+I+  +
Sbjct:  204 EPILGPTYLPRKFKTTVVIPPQNDVDLHANDLNFVAISD-NGQLVGFNVLVGGGLSIAHGDKTTYPRTASELGYIPLAQTLAVAEAVVTTQRDWGNRTNRKNAKTKYTLERVGVDTFKQEVERRAGMTFETVRPYAFTGRGDRIGWVKGIDNKWHLTLFIENGRLLDYPGRPLKTGMAEIAKIHKGDFRLTANQNLIVAGV 403          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_BREBN (Sulfite reductase [NADPH] hemoprotein beta-component OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=cysI PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.009e-32
Identity = 75/201 (37.31%), Postives = 112/201 (55.72%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGK----MKKTLREIIEKYNLNVRITPNQNIILCDI 654
            EPIYG  +LPRKFK+ + VP  N VD+ + D+G + + +E G   GFN+ VGGGMG TH    T+P++   +G+V  E +L   +  V+ QR+ G R  RK++R KY I   GIE F   +EQ  G + E  R           GW +  D      L + NGR+  +    +K  LREI + +  + R+TPNQN+++ ++
Sbjct:  206 EPIYGPVYLPRKFKIGIAVPPANDVDVFSQDLGFIAIHEE-GRLLGFNVAVGGGMGMTHGDPKTYPQVARVIGFVTPEQVLEVAEKTVMIQRDYGDRAVRKHARFKYTIDDRGIEWFIHELEQRLGWELEQVRPYHFEHNGDRYGWVKGSDDNWHFTLFIQNGRVKDEDNYLLKSGLREIAKVHTGDFRLTPNQNLLIGNV 405          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_SALA4 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Salmonella agona (strain SL483) GN=cysI PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32
Identity = 79/206 (38.35%), Postives = 115/206 (55.83%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDIRKAWK 669
            EPI G  +LPRKFK  V +P  N +D+  ND+  V ++ ENG+  GFNL VGGG+   H  + T+ R   + GY+P E  L   +A+V TQR+ G R DRK ++ KY +   G+E F++ VE+  G  FEP R          +GW +  D      L +++GRI    G+  KT L EI + +    RIT NQN+I+  + ++ K
Sbjct:  204 EPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIA-ENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIESGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQK 408          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_PHOLL (Sulfite reductase [NADPH] hemoprotein beta-component OS=Photorhabdus luminescens subsp. laumondii GN=cysI PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32
Identity = 75/207 (36.23%), Postives = 118/207 (57.00%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGK-MKKTLREIIEKYNLNVRITPNQNIILCDIRKAWKR 672
            EPI G+ +LPRKFK  V +P  N VD+  ND+  + ++ E  +  GFN+ VGGG+  TH  + T+P +  + GY+P E  L   +A+V TQR+ G R +RK ++ KY +   G+E F++ VE+  G KFE  R          +GW +  D      L ++NGR+    GK +K  + EI + +  + R+T NQN+I+  I ++ K+
Sbjct:  204 EPILGSTYLPRKFKTTVVIPPQNDVDLHANDLNFIAIA-EGSKLVGFNVLVGGGLAMTHGDKNTYPSMASEFGYIPLEHTLAIAEAVVTTQRDWGNRTERKNAKTKYTLERVGVETFKAEVERRAGVKFEAIRPYEFTGRGDQIGWLKGIDDKWHLTLFIENGRLLDYPGKPLKSGVAEIAKIHKGDFRLTANQNLIIAGIPESEKQ 409          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_NITWN (Sulfite reductase [NADPH] hemoprotein beta-component OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=cysI PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.839e-32
Identity = 71/205 (34.63%), Postives = 112/205 (54.63%), Query Frame = 1
Query:   55 DSPE-PIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAG----KMKKTLREIIEKYNLNVRITPNQNIILCDI 654
            D PE P YG  ++PRKFK+   +P  N +D+   D+G + ++   G+ +GFN+ +GGG+GRT +   T+PRL   +GY+  + +   + A++  QR+ G R DR ++R KY I   GI+  ++  E+  G   +P +          LGW +  DG   C L + NGR+       M   LR I + +    R+TPNQN+I+ DI
Sbjct:  205 DGPEEPFYGRTYMPRKFKIGFAIPPSNDIDVYGQDLGFIAIA-HRGKLKGFNVAIGGGLGRTDQSPKTYPRLASVIGYIDADKLFPTIDAVMSVQRDYGDRLDRLHARFKYTIDEKGIDWIKAETERRLGFALKPEQPYTFTSNGDPLGWVKGEDGREHCALFIQNGRVINTPDHPMMDGLRAIAQVHKGMFRVTPNQNLIIADI 408          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_NITHX (Sulfite reductase [NADPH] hemoprotein beta-component OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=cysI PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.839e-32
Identity = 72/205 (35.12%), Postives = 112/205 (54.63%), Query Frame = 1
Query:   55 DSPE-PIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAG----KMKKTLREIIEKYNLNVRITPNQNIILCDI 654
            D PE P YG  ++PRKFK+   +P  N +D+   D+G + ++   G+ +GFN+ +GGG+GRT +   T+PRL   +GY+  + +   + A++  QR+ G R DR ++R KY I   G++  ++  E+  G   EP +          LGW +  DG   C L + NGR+       M   LR I + +    RITPNQN+I+ DI
Sbjct:  205 DGPEEPFYGRTYMPRKFKIGFAIPPSNDIDVYGQDLGFIAIA-RRGKLKGFNVAIGGGLGRTDQSPKTYPRLATVIGYIDADKLFPTIDAVMSVQRDYGDRLDRLHARFKYTIDEKGLDWIKAEAERRLGFALEPAQPYTFTSNGDPLGWVKGEDGREHCTLFIQNGRVINTPDHPMMDGLRAIAQVHKGMFRITPNQNLIISDI 408          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_BLOPB (Sulfite reductase [NADPH] hemoprotein beta-component OS=Blochmannia pennsylvanicus (strain BPEN) GN=cysI PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.839e-32
Identity = 73/216 (33.80%), Postives = 120/216 (55.56%), Query Frame = 1
Query:   31 NSHGTNFPDSPEPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQ-GFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGK-----MKKTLREIIEKYNLNVRITPNQNIILCDIRK 660
            +S  T   DS EPI    +LPRKFK+A+ +P  N VD+  ND+  + +  EN +   GFN+ VGGG+  T+   TT+PR     GY+  +D+L   + +V  QR+ G R DR++++ KY ++  G+  F+S VE+  G +F P R     +     GW +  D      L ++NGRI+       +K+ + E+ + ++ + R+T NQN+I+  + K
Sbjct:  195 DSKKTESTDS-EPILSATYLPRKFKIAIAIPPINDVDVHANDLSFIAIKSENTDQIIGFNVLVGGGLAMTYGDITTYPRKASAFGYISTKDVLKIAETVVTVQRDWGNRSDRRHAKTKYTLTRVGVTTFKSEVERRSGVQFHPIRPYVFTDRGDRFGWVQGIDDYWHLTLFIENGRISNNDPHKLLKRGIAEVAQIHSGSFRLTANQNLIISGVSK 409          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_STAES (Sulfite reductase [NADPH] hemoprotein beta-component OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cysI PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.932e-32
Identity = 70/204 (34.31%), Postives = 117/204 (57.35%), Query Frame = 1
Query:   55 DSPEPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGK----MKKTLREIIEKYNLNVRITPNQNIILCDI 654
            +  EPIYG  +LPRKFK+ + VP  N +D+ + DIG++ + +++ E  GFN+ +GGGMG TH +  T+P+LG  +G++PKE ++   + I+  QR+ G R++RK +R KY +   G       + +  G + +  R          LGW E  +   F  L + NGR+       +K  LREI E +  + R++PNQN+++ ++
Sbjct:  203 EEKEPIYGNTYLPRKFKIGIAVPPSNDIDVYSQDIGLIAIVEQD-ELIGFNVTIGGGMGMTHGITETYPQLGRLIGFIPKEKVVDVCEKILTIQRDYGNRENRKNARFKYTVDRLGETWVTEELNRRLGWEIKAPRDFEFEHNGDRLGWIEGINNWNFT-LFIQNGRVKDTEDYLLKTALREIAEIHTGDFRLSPNQNLVIANV 404          
The following BLAST results are available for this feature:
BLAST of CN188918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
CYSI_ERWCT2.350e-3239.30Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_SALAR3.070e-3237.38Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_DICZE4.009e-3237.81Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_BREBN4.009e-3237.31Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_SALA45.236e-3238.35Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_PHOLL5.236e-3236.23Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_NITWN6.839e-3234.63Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_NITHX6.839e-3235.12Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_BLOPB6.839e-3233.80Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_STAES8.932e-3234.31Sulfite reductase [NADPH] hemoprotein beta-compone... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A16_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188918 ID=CN188918; Name=CN188918; organism=Citrus sinensis; type=EST; length=714bp
GAGGCTGAAGTGGTAAAGGCACGTAATGATAATTCTCATGGAACAAATTT
CCCTGATTCTCCTGAGCCCATCTATGGGACTCAGTTCTTGCCAAGGAAGT
TCAAAGTTGCAGTAACGGTGCCAACAGATAACTCGGTGGATATTCTTACT
AATGATATTGGTGTTGTTGTTGTTTCTGATGAAAATGGGGAACCTCAGGG
ATTCAACTTATATGTTGGTGGTGGTATGGGAAGAACGCATCGGTTGGAAA
CCACATTTCCCCGTCTTGGAGAACAGTTGGGCTATGTGCCAAAAGAGGAC
ATTCTATATGCTGTGAAAGCTATTGTTGTTACCCAAAGAGAAAATGGGAG
GAGAGATGATCGCAAGTATAGTAGAATGAAATATTTGATCAGCTCCTGGG
GAATTGAGAAGTTTAGAAGTGTTGTTGAGCAATATTATGGAAAGAAATTT
GAGCCTTTCCGTCAATTGCCAGAGTGGGAATTTAAAAGTCATTTGGGATG
GCATGAGCAGGGGGATGGTGGTTTATTTTGTGGACTTCATGTTGATAATG
GTCGTATTGCGGGTAAAATGAAGAAGACATTGAGGGAGATAATAGAGAAG
TATAACTTAAATGTGCGGATCACTCCTAACCAGAATATTATCTTGTGTGA
CATTCGTAAAGCATGGAAGCGTCCCCATCACTACAGCTCTCGCACAGGGT
GGACTGCTGCTTTC
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