CN188918

Overview
NameCN188918
Unique NameCN188918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_YERPS (Sulfite reductase [NADPH] hemoprotein beta-component OS=Yersinia pseudotuberculosis GN=cysI PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30
Identity = 73/201 (36.32%), Postives = 112/201 (55.72%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            EPI G  +LPRKFK  V +P  N VD+  ND+  V V+D+ G+  GFN+ VGGG+   H  + T+PR   + GY+P +  L   +A+V TQR+ G R DRK ++ KY +   G+E F++ VE+  G  F   +          +GW +  D      L ++NGR+    G+  KT + EI + +  + R+T NQN+I+  +
Sbjct:  204 EPILGATYLPRKFKTTVVIPPQNDVDLHANDLNFVAVADK-GKLIGFNVLVGGGLSIAHGDKNTYPRKASEFGYIPLKHTLAIAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVEKRAGVSFSAIKPYQFTGRGDRIGWVKGVDKKWHLTLFIENGRLLDYPGRSLKTGVAEIAKIHQGDFRLTANQNLIVAGV 403          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_YERPP (Sulfite reductase [NADPH] hemoprotein beta-component OS=Yersinia pestis (strain Pestoides F) GN=cysI PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30
Identity = 74/201 (36.82%), Postives = 112/201 (55.72%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            EPI G  +LPRKFK  V +P  N VD+  ND+  V V+D+ G+  GFN+ VGGG+   H  + T+PR   + GY+P +  L   +A+V TQR+ G R DRK ++ KY +   G+E F++ VE+  G  F   +          +GW +  D      L V+NGR+    G+  KT + EI + +  + R+T NQN+I+  +
Sbjct:  204 EPILGATYLPRKFKTTVVIPPQNDVDLHANDLNFVAVADK-GKLIGFNVLVGGGLSIAHGDKNTYPRKASEFGYIPLKHTLAIAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVEKRAGVSFSAIKPYQFIGRGDRIGWVKGVDKKWHLTLFVENGRLLDYPGRSLKTGVAEIAKIHQGDFRLTANQNLIVAGV 403          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_YERPN (Sulfite reductase [NADPH] hemoprotein beta-component OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=cysI PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30
Identity = 74/201 (36.82%), Postives = 112/201 (55.72%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            EPI G  +LPRKFK  V +P  N VD+  ND+  V V+D+ G+  GFN+ VGGG+   H  + T+PR   + GY+P +  L   +A+V TQR+ G R DRK ++ KY +   G+E F++ VE+  G  F   +          +GW +  D      L V+NGR+    G+  KT + EI + +  + R+T NQN+I+  +
Sbjct:  204 EPILGATYLPRKFKTTVVIPPQNDVDLHANDLNFVAVADK-GKLIGFNVLVGGGLSIAHGDKNTYPRKASEFGYIPLKHTLAIAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVEKRAGVSFSAIKPYQFIGRGDRIGWVKGVDKKWHLTLFVENGRLLDYPGRSLKTGVAEIAKIHQGDFRLTANQNLIVAGV 403          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_YERPE (Sulfite reductase [NADPH] hemoprotein beta-component OS=Yersinia pestis GN=cysI PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30
Identity = 74/201 (36.82%), Postives = 112/201 (55.72%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            EPI G  +LPRKFK  V +P  N VD+  ND+  V V+D+ G+  GFN+ VGGG+   H  + T+PR   + GY+P +  L   +A+V TQR+ G R DRK ++ KY +   G+E F++ VE+  G  F   +          +GW +  D      L V+NGR+    G+  KT + EI + +  + R+T NQN+I+  +
Sbjct:  204 EPILGATYLPRKFKTTVVIPPQNDVDLHANDLNFVAVADK-GKLIGFNVLVGGGLSIAHGDKNTYPRKASEFGYIPLKHTLAIAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVEKRAGVSFSAIKPYQFIGRGDRIGWVKGVDKKWHLTLFVENGRLLDYPGRSLKTGVAEIAKIHQGDFRLTANQNLIVAGV 403          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_YERPB (Sulfite reductase [NADPH] hemoprotein beta-component OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=cysI PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30
Identity = 73/201 (36.32%), Postives = 112/201 (55.72%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            EPI G  +LPRKFK  V +P  N VD+  ND+  V V+D+ G+  GFN+ VGGG+   H  + T+PR   + GY+P +  L   +A+V TQR+ G R DRK ++ KY +   G+E F++ VE+  G  F   +          +GW +  D      L ++NGR+    G+  KT + EI + +  + R+T NQN+I+  +
Sbjct:  204 EPILGATYLPRKFKTTVVIPPQNDVDLHANDLNFVAVADK-GKLIGFNVLVGGGLSIAHGDKNTYPRKASEFGYIPLKHTLAIAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVEKRAGVSFSAIKPYQFTGRGDRIGWVKGVDKKWHLTLFIENGRLLDYPGRSLKTGVAEIAKIHQGDFRLTANQNLIVAGV 403          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_YERPA (Sulfite reductase [NADPH] hemoprotein beta-component OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=cysI PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30
Identity = 74/201 (36.82%), Postives = 112/201 (55.72%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            EPI G  +LPRKFK  V +P  N VD+  ND+  V V+D+ G+  GFN+ VGGG+   H  + T+PR   + GY+P +  L   +A+V TQR+ G R DRK ++ KY +   G+E F++ VE+  G  F   +          +GW +  D      L V+NGR+    G+  KT + EI + +  + R+T NQN+I+  +
Sbjct:  204 EPILGATYLPRKFKTTVVIPPQNDVDLHANDLNFVAVADK-GKLIGFNVLVGGGLSIAHGDKNTYPRKASEFGYIPLKHTLAIAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVEKRAGVSFSAIKPYQFIGRGDRIGWVKGVDKKWHLTLFVENGRLLDYPGRSLKTGVAEIAKIHQGDFRLTANQNLIVAGV 403          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_YERP3 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=cysI PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30
Identity = 73/201 (36.32%), Postives = 112/201 (55.72%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGKMKKT-LREIIEKYNLNVRITPNQNIILCDI 654
            EPI G  +LPRKFK  V +P  N VD+  ND+  V V+D+ G+  GFN+ VGGG+   H  + T+PR   + GY+P +  L   +A+V TQR+ G R DRK ++ KY +   G+E F++ VE+  G  F   +          +GW +  D      L ++NGR+    G+  KT + EI + +  + R+T NQN+I+  +
Sbjct:  204 EPILGATYLPRKFKTTVVIPPQNDVDLHANDLNFVAVADK-GKLIGFNVLVGGGLSIAHGDKNTYPRKASEFGYIPLKHTLAIAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVEKRAGVSFSAIKPYQFTGRGDRIGWVKGVDKKWHLTLFIENGRLLDYPGRSLKTGVAEIAKIHQGDFRLTANQNLIVAGV 403          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_BACSK (Sulfite reductase [NADPH] hemoprotein beta-component OS=Bacillus clausii (strain KSM-K16) GN=cysI PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30
Identity = 76/215 (35.35%), Postives = 113/215 (52.56%), Query Frame = 1
Query:   40 GTNFPDSPEPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAG----KMKKTLREIIEKYNLNVRITPNQNIILCDIRKAWKR 672
            GT   D  EP+YG  +LPRKFK+ V VP  N VDI + DIG + + +E G+  GFN+  GGGMG TH    T+P+LG  +G+   + I+   + ++  QR+ G R  RKY+R KY I   G++  ++ +    G +    R           GW +   G     L + NGRI      ++   LREI + +    R+T NQN+I+ +I  A K+
Sbjct:  198 GTPQQDEVEPMYGPLYLPRKFKIGVAVPPANDVDIFSQDIGFIAILEE-GKLTGFNVACGGGMGMTHGDTKTYPQLGRIIGFCEPQQIMDVAEKLITIQRDYGNRSVRKYARFKYTIDRRGLDWLKNELHARLGWELGEARPFQFDHNGDRYGWTKGVKGRWHLTLFIQNGRIQDTDDYQLMTGLREIAKIHTGEFRLTGNQNVIISNITAAKKK 411          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_XYLFT (Sulfite reductase [NADPH] hemoprotein beta-component OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=cysI PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.901e-30
Identity = 76/204 (37.25%), Postives = 107/204 (52.45%), Query Frame = 1
Query:   55 DSPEPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGKMKKTL----REIIEKYNLNVRITPNQNIILCDI 654
            +  EPIYG  +LPRKFK+    P  N VD+  ND+G + V  +N    G+N+ +GGGMG TH    T+PR+G  +G++ + D++    AIV TQR+ G R  RK +R KY I   G++     ++Q  G   +P R           GW E  DG     L +  GRIA     TL    REI +      R+TPNQN+++  I
Sbjct:  190 EEEEPIYGPHYLPRKFKIGFAAPPINDVDVFANDLGFIAVIVDN-TLLGYNVTIGGGMGTTHGDPDTWPRVGNIIGFITRADLITISTAIVTTQRDFGNRTLRKRARFKYTIDDRGLDCIVGEIQQRAGITLQPARPFVFEHNGDRYGWIEGEDGHWHLTLSLPAGRIADTEGSTLLSGFREIAQLGIGEFRMTPNQNVVIAGI 392          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_XYLF2 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Xylella fastidiosa (strain M23) GN=cysI PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.901e-30
Identity = 76/204 (37.25%), Postives = 107/204 (52.45%), Query Frame = 1
Query:   55 DSPEPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGKMKKTL----REIIEKYNLNVRITPNQNIILCDI 654
            +  EPIYG  +LPRKFK+    P  N VD+  ND+G + V  +N    G+N+ +GGGMG TH    T+PR+G  +G++ + D++    AIV TQR+ G R  RK +R KY I   G++     ++Q  G   +P R           GW E  DG     L +  GRIA     TL    REI +      R+TPNQN+++  I
Sbjct:  190 EEEEPIYGPHYLPRKFKIGFAAPPINDVDVFANDLGFIAVIVDN-TLLGYNVTIGGGMGTTHGDPDTWPRVGNIIGFITRADLITISTAIVTTQRDFGNRTLRKRARFKYTIDDRGLDCIVGEIQQRAGITLQPARPFVFEHNGDRYGWIEGEDGHWHLTLSLPAGRIADTEGSTLLSGFREIAQLGIGEFRMTPNQNVVIAGI 392          
The following BLAST results are available for this feature:
BLAST of CN188918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
CYSI_YERPS3.753e-3036.32Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_YERPP3.753e-3036.82Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_YERPN3.753e-3036.82Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_YERPE3.753e-3036.82Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_YERPB3.753e-3036.32Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_YERPA3.753e-3036.82Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_YERP33.753e-3036.32Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_BACSK3.753e-3035.35Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_XYLFT4.901e-3037.25Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_XYLF24.901e-3037.25Sulfite reductase [NADPH] hemoprotein beta-compone... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A16_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188918 ID=CN188918; Name=CN188918; organism=Citrus sinensis; type=EST; length=714bp
GAGGCTGAAGTGGTAAAGGCACGTAATGATAATTCTCATGGAACAAATTT
CCCTGATTCTCCTGAGCCCATCTATGGGACTCAGTTCTTGCCAAGGAAGT
TCAAAGTTGCAGTAACGGTGCCAACAGATAACTCGGTGGATATTCTTACT
AATGATATTGGTGTTGTTGTTGTTTCTGATGAAAATGGGGAACCTCAGGG
ATTCAACTTATATGTTGGTGGTGGTATGGGAAGAACGCATCGGTTGGAAA
CCACATTTCCCCGTCTTGGAGAACAGTTGGGCTATGTGCCAAAAGAGGAC
ATTCTATATGCTGTGAAAGCTATTGTTGTTACCCAAAGAGAAAATGGGAG
GAGAGATGATCGCAAGTATAGTAGAATGAAATATTTGATCAGCTCCTGGG
GAATTGAGAAGTTTAGAAGTGTTGTTGAGCAATATTATGGAAAGAAATTT
GAGCCTTTCCGTCAATTGCCAGAGTGGGAATTTAAAAGTCATTTGGGATG
GCATGAGCAGGGGGATGGTGGTTTATTTTGTGGACTTCATGTTGATAATG
GTCGTATTGCGGGTAAAATGAAGAAGACATTGAGGGAGATAATAGAGAAG
TATAACTTAAATGTGCGGATCACTCCTAACCAGAATATTATCTTGTGTGA
CATTCGTAAAGCATGGAAGCGTCCCCATCACTACAGCTCTCGCACAGGGT
GGACTGCTGCTTTC
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