CN188918

Overview
NameCN188918
Unique NameCN188918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_XANCB (Sulfite reductase [NADPH] hemoprotein beta-component OS=Xanthomonas campestris pv. campestris (strain B100) GN=cysI PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.022e-27
Identity = 69/201 (34.33%), Postives = 104/201 (51.74%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIA----GKMKKTLREIIEKYNLNVRITPNQNIILCDI 654
            EPIYG ++LPRKFK+    P  N VD+  ND+G + +  E G+  G+N+ +GGGMG +H    T+PR+   +G+V  + +L    A+V TQR+ G R  RK +R KY I   G++   + +E+  G   +P +           GW E   G     L +  GRIA          LR I +      R+TPNQN+++  +
Sbjct:  192 EPIYGDRYLPRKFKIGFAAPPHNDVDVFANDLGFIAILRE-GQLLGYNVSIGGGMGASHGDAETWPRVANVIGFVTGDQLLDIATAVVTTQRDLGNRAVRKRARFKYTIDDHGLDTIVAEIERRAGFSLQPAQPFAFAHNGDRYGWVEGEQGDWHLTLSLPAGRIADTDTAAHLSGLRAIAQLQMGEFRMTPNQNLVIAGV 391          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_XANC8 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Xanthomonas campestris pv. campestris (strain 8004) GN=cysI PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.022e-27
Identity = 69/201 (34.33%), Postives = 104/201 (51.74%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIA----GKMKKTLREIIEKYNLNVRITPNQNIILCDI 654
            EPIYG ++LPRKFK+    P  N VD+  ND+G + +  E G+  G+N+ +GGGMG +H    T+PR+   +G+V  + +L    A+V TQR+ G R  RK +R KY I   G++   + +E+  G   +P +           GW E   G     L +  GRIA          LR I +      R+TPNQN+++  +
Sbjct:  192 EPIYGDRYLPRKFKIGFAAPPHNDVDVFANDLGFIAILRE-GQLLGYNVSIGGGMGASHGDAETWPRVANVIGFVTGDQLLDIATAVVTTQRDLGNRAVRKRARFKYTIDDHGLDTIVAEIERRAGFSLQPAQPFAFAHNGDRYGWVEGEQGDWHLTLSLPAGRIADTDTAAHLSGLRAIAQLQMGEFRMTPNQNLVIAGV 391          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_XANOR (Sulfite reductase [NADPH] hemoprotein beta-component OS=Xanthomonas oryzae pv. oryzae GN=cysI PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 69/201 (34.33%), Postives = 105/201 (52.24%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGKMKKT----LREIIEKYNLNVRITPNQNIILCDI 654
            EPIYG ++LPRKFK+    P  N VD+  ND+G + +   +G   G+N+ +GGGMG +H    T+PR+   +G+V ++ +L    A+V TQR+ G R  RK +R KY I   G++   + + +  G   +P +           GW E  DG     L +  GRIA     T    LR I +      R+TPNQN+++  +
Sbjct:  192 EPIYGDRYLPRKFKIGFAAPPLNDVDVFANDLGFIAIL-RDGRLLGYNVSIGGGMGASHGDAQTWPRVANVIGFVTRDQLLDIATAVVTTQRDFGNRAVRKRARFKYTIDDHGLDTIVAEIARRAGFALQPAQPFAFEHNGDRYGWVEGEDGLWHLTLSLPAGRIADTDTATHLSGLRAIAQLNVGEFRMTPNQNLVIAGV 391          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_XANOP (Sulfite reductase [NADPH] hemoprotein beta-component OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=cysI PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 69/201 (34.33%), Postives = 105/201 (52.24%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGKMKKT----LREIIEKYNLNVRITPNQNIILCDI 654
            EPIYG ++LPRKFK+    P  N VD+  ND+G + +   +G   G+N+ +GGGMG +H    T+PR+   +G+V ++ +L    A+V TQR+ G R  RK +R KY I   G++   + + +  G   +P +           GW E  DG     L +  GRIA     T    LR I +      R+TPNQN+++  +
Sbjct:  192 EPIYGDRYLPRKFKIGFAAPPLNDVDVFANDLGFIAIL-RDGRLLGYNVSIGGGMGASHGDAQTWPRVANVIGFVTRDQLLDIATAVVTTQRDFGNRAVRKRARFKYTIDDHGLDTIVAEIARRAGFALQPAQPFAFEHNGDRYGWVEGEDGLWHLTLSLPAGRIADTDTATHLSGLRAIAQLNVGEFRMTPNQNLVIAGV 391          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_XANOM (Sulfite reductase [NADPH] hemoprotein beta-component OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=cysI PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 69/201 (34.33%), Postives = 105/201 (52.24%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGKMKKT----LREIIEKYNLNVRITPNQNIILCDI 654
            EPIYG ++LPRKFK+    P  N VD+  ND+G + +   +G   G+N+ +GGGMG +H    T+PR+   +G+V ++ +L    A+V TQR+ G R  RK +R KY I   G++   + + +  G   +P +           GW E  DG     L +  GRIA     T    LR I +      R+TPNQN+++  +
Sbjct:  192 EPIYGDRYLPRKFKIGFAAPPLNDVDVFANDLGFIAIL-RDGRLLGYNVSIGGGMGASHGDAQTWPRVANVIGFVTRDQLLDIATAVVTTQRDFGNRAVRKRARFKYTIDDHGLDTIVAEIARRAGFALQPAQPFAFEHNGDRYGWVEGEDGLWHLTLSLPAGRIADTDTATHLSGLRAIAQLNVGEFRMTPNQNLVIAGV 391          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_BUCAP (Putative sulfite reductase [NADPH] hemoprotein beta-component OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cysI PE=5 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 69/201 (34.33%), Postives = 106/201 (52.74%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGK----MKKTLREIIEKYNLNVRITPNQNIILCDI 654
            EPI G  +LPRKFK  V VP  N VD+  ND+  + ++ +N +  GFN+ +GGG+   H  + T+P L  +LGY+  E  L   ++IV TQR+ G R DRK ++ +Y I+  G+  F+  VE+     FE  +           GW +  +      + + NGRI       +K  L +I   +  N R+T NQNI++ +I
Sbjct:  200 EPILGKTYLPRKFKTTVVVPPYNDVDLYANDMNFIAIT-KNNKIVGFNVLIGGGLSINHGNKNTWPFLAVELGYITLEKTLSVAESIVTTQRDWGNRTDRKNAKTRYTIAKVGLSVFKKEVEKRANMTFETIKPYYFISRGDRFGWTKNINNDWSLTVFIQNGRIYDNDKQLVKSGLLKIANLHTGNFRLTANQNIVISEI 399          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_XANAC (Sulfite reductase [NADPH] hemoprotein beta-component OS=Xanthomonas axonopodis pv. citri GN=cysI PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.883e-27
Identity = 69/201 (34.33%), Postives = 105/201 (52.24%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIA----GKMKKTLREIIEKYNLNVRITPNQNIILCDI 654
            EPIYG ++LPRKFK+    P  N VD+  ND+G + +   +G+  G+N+ +GGGMG +H    T+PR+   +G+V +E +L    A+V TQR+ G R  RK +R KY I   G++   + + +  G   +P +           GW E  DG     L +  GRIA          LR I +      R+TPNQN+++  +
Sbjct:  192 EPIYGERYLPRKFKIGFAAPPLNDVDVFANDLGFIAIL-RDGQLLGYNVSIGGGMGASHGDAETWPRVANVIGFVTREQLLDIATAVVTTQRDFGNRAVRKRARFKYTIDDHGLDTIVAEIARRAGFALQPAQPFAFDHNGDRYGWVEGEDGLWHLTLSLPAGRIADTDTAAHLSGLRAIAQLNVGEFRMTPNQNLVIAGV 391          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_BACA2 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Bacillus amyloliquefaciens (strain FZB42) GN=cysI PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.883e-27
Identity = 66/220 (30.00%), Postives = 113/220 (51.36%), Query Frame = 1
Query:   28 DNSHGTNFPDSP-EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAG----KMKKTLREIIEKYNLNVRITPNQNIILCDIRKAWKR 672
            D       PD+  EP+YG  +LPRKFK+ + VP  N +D+ + D+G + + +E G   GFN+ +GGGMG TH    T+P+L + +G+   E +    +  +  QR+ G R  RK +R KY +   G+E  ++ +E   G + +  +           GW +   G     + ++ GR+      K+   LREI + +  + R+T NQN+I+ ++    K+
Sbjct:  191 DEERVAGTPDTETEPMYGPLYLPRKFKIGIAVPPSNDIDVYSQDLGFIAIVEE-GRLIGFNVAIGGGMGMTHGDTATYPQLSKVIGFCKPEQLYDVAEKTITIQRDYGNRSVRKNARFKYTVDRLGLENVKAELENRLGWQLDEAKPYHFDHNGDRYGWVKGVKGKWHFTMFIEGGRVTDYENYKLMTGLREIAKVHTGDFRLTSNQNLIIGNVSSQKKK 409          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_XANC5 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=cysI PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.072e-27
Identity = 68/201 (33.83%), Postives = 105/201 (52.24%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIA----GKMKKTLREIIEKYNLNVRITPNQNIILCDI 654
            EPIYG ++LPRKFK+    P  N VD+  ND+G + +   +G+  G+N+ +GGGMG +H    T+PR+   +G+V ++ +L    A+V TQR+ G R  RK +R KY I   G++   + + +  G   +P +           GW E  DG     L +  GRIA          LR I +      R+TPNQN+++  +
Sbjct:  192 EPIYGERYLPRKFKIGFAAPPLNDVDVFANDLGFIAIL-RDGQLLGYNVSIGGGMGASHGDAETWPRVANVIGFVTRDQLLDIATAVVTTQRDFGNRAVRKRARFKYTIDDHGLDTIVAEIARRAGFALQPAQPFAFDHNGDRYGWVEGEDGRWHLTLSLPAGRIADTDTAAHLSGLRAIAQLNVGEFRMTPNQNLVIAGV 391          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_BACSU (Sulfite reductase [NADPH] hemoprotein beta-component OS=Bacillus subtilis GN=cysI PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.624e-27
Identity = 65/201 (32.34%), Postives = 105/201 (52.24%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAG----KMKKTLREIIEKYNLNVRITPNQNIILCDI 654
            EP+YG  +LPRKFK+ + VP  N +D+ + D+G + +  E+G+  GFN+ +GGGMG TH    T+P+L + +G+   E +    +  +  QR+ G R  RK +R KY +   G+E  +  +E   G   E  +           GW E  +      L V+ GRI      K+   LREI + +    R+T NQN+++ ++
Sbjct:  204 EPMYGPLYLPRKFKIGIAVPPSNDIDVFSQDLGFIAIV-EDGKLIGFNVAIGGGMGMTHGDTATYPQLAKVIGFCRPEQMYDVAEKTITIQRDYGNRSVRKNARFKYTVDRLGLENVKEELENRLGWSLEEAKPYHFDHNGDRYGWVEGIEDKWHFTLFVEGGRITDYDDYKLMTGLREIAKVHTGEFRLTANQNLMIANV 403          
The following BLAST results are available for this feature:
BLAST of CN188918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
CYSI_XANCB1.022e-2734.33Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_XANC81.022e-2734.33Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_XANOR2.973e-2734.33Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_XANOP2.973e-2734.33Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_XANOM2.973e-2734.33Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_BUCAP2.973e-2734.33Putative sulfite reductase [NADPH] hemoprotein bet... [more]
CYSI_XANAC3.883e-2734.33Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_BACA23.883e-2730.00Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_XANC55.072e-2733.83Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_BACSU6.624e-2732.34Sulfite reductase [NADPH] hemoprotein beta-compone... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A16_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188918 ID=CN188918; Name=CN188918; organism=Citrus sinensis; type=EST; length=714bp
GAGGCTGAAGTGGTAAAGGCACGTAATGATAATTCTCATGGAACAAATTT
CCCTGATTCTCCTGAGCCCATCTATGGGACTCAGTTCTTGCCAAGGAAGT
TCAAAGTTGCAGTAACGGTGCCAACAGATAACTCGGTGGATATTCTTACT
AATGATATTGGTGTTGTTGTTGTTTCTGATGAAAATGGGGAACCTCAGGG
ATTCAACTTATATGTTGGTGGTGGTATGGGAAGAACGCATCGGTTGGAAA
CCACATTTCCCCGTCTTGGAGAACAGTTGGGCTATGTGCCAAAAGAGGAC
ATTCTATATGCTGTGAAAGCTATTGTTGTTACCCAAAGAGAAAATGGGAG
GAGAGATGATCGCAAGTATAGTAGAATGAAATATTTGATCAGCTCCTGGG
GAATTGAGAAGTTTAGAAGTGTTGTTGAGCAATATTATGGAAAGAAATTT
GAGCCTTTCCGTCAATTGCCAGAGTGGGAATTTAAAAGTCATTTGGGATG
GCATGAGCAGGGGGATGGTGGTTTATTTTGTGGACTTCATGTTGATAATG
GTCGTATTGCGGGTAAAATGAAGAAGACATTGAGGGAGATAATAGAGAAG
TATAACTTAAATGTGCGGATCACTCCTAACCAGAATATTATCTTGTGTGA
CATTCGTAAAGCATGGAAGCGTCCCCATCACTACAGCTCTCGCACAGGGT
GGACTGCTGCTTTC
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