CN188910

Overview
NameCN188910
Unique NameCN188910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.302e-24
Identity = 73/186 (39.25%), Postives = 101/186 (54.30%), Query Frame = 3
Query:   48 TTKGNHKLTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI-SLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            T+     L ADV PE  D+RE GI+   KDQG CGSCW F++ G++E  Y +   K I +LSEQ++VDC++   N GC+GG P  +F Y   N G+   + Y Y   D +   +        L SV      E+EL  A+  V PVSV   V D F FY  G+++    G    ++NH+V+ VGYG
Sbjct:  328 TSSSGANLLADV-PEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDCSKL--NFGCDGGHPFYSFIYAIEN-GICMGDDYKYKAMDNLFCLNYRCKNKVTLSSVGGV--KENELIRALNEVGPVSVNVGVTDDFSFYGGGIFN----GTCTEELNHSVLLVGYG 503          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.007e-24
Identity = 66/178 (37.08%), Postives = 97/178 (54.49%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSE-NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            P++ DWR  G ++PVK+QG CGSCW FST  ++E       G  + LSEQ+LVDC +  ++ GC GG  + + +Y+  N G+ T + YPY  K   C+ + +    V++     +    E     A+   +P+SV  E     F+ YKSGV+    CG     ++HAV AVGYG  DG
Sbjct:  136 PQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK--HSYGCKGGYQTTSLQYVA-NNGVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALA-NQPLSVLVEAGGKPFQLYKSGVFDG-PCGT---KLDHAVTAVGYGTSDG 305          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.129e-24
Identity = 75/205 (36.59%), Postives = 107/205 (52.20%), Query Frame = 3
Query:   12 RHRLGAAQNCSATTKGNHKLTADVL--PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI--KYNGGLDTEEAYPYTGKDGV---CKFSSENVGVQVLDSVNITLGAEDELQHAVGLV--RPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 599
            R+  GAA   +A  +    +  +V+  P   DWR  G ++ VKDQG CGSCW FS  G++E  +  A     +LSEQ LV C +   + GC+GGL + AFE+I  + NG + TE++YPY   +G+   C  S   VG  +   V +    +DE Q A  L    PV+VA +    +  Y  GV   T C +  +D  H V+ VGY
Sbjct:   97 RYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK--TDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVEL---PQDEAQIAAWLAVNGPVAVAVD-ASSWMTYTGGV--MTSCVSEQLD--HGVLLVGY 291          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.143e-23
Identity = 64/171 (37.43%), Postives = 90/171 (52.63%), Query Frame = 3
Query:   99 DWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 611
            DWR    ++ VK+QG CG+CW F+T  SLE+ +  A  + I+LSEQQ++DC     + GC GGL   AFE I   GG+  E  YPY   +  C+       V V          E++L+  + L  P+ VA +  D    Y+ G+     C N    +NHAV+ VGYGVE+
Sbjct:  117 DWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCDSV--DVGCEGGLLHTAFEAIISMGGVQIENDYPYESSNNYCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILN-YEQGIIK--YCANN--GLNHAVLLVGYGVEN 280          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 2.545e-23
Identity = 69/181 (38.12%), Postives = 95/181 (52.49%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVG---VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            LPE+ DWR  G ++PVK QG+C SCW FST  ++E       G  + LSEQ+LVDC +   + GCN G  S + +Y+  N G+     YPY  K   C+  +  VG   V+      +    E  L +A+   +PVSV  E     F+ YK G++  + CG     V+HAV AVGYG   G
Sbjct:  133 LPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDK--QSYGCNRGYQSTSLQYVAQN-GIHLRAKYPYIAKQQTCR--ANQVGGPKVKTNGVGRVQSNNEGSLLNAIA-HQPVSVVVESAGRDFQNYKGGIFEGS-CGT---KVDHAVTAVGYGKSGG 303          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.545e-23
Identity = 69/168 (41.07%), Postives = 94/168 (55.95%), Query Frame = 3
Query:   99 DWRESGILS--PVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 596
            DW ++  +    VK+QG CGSCW FS  G+LE        +   LSEQ LVDC+  ++N GCNGG    AFEY+  NG  + ++ YPYT KDG CK S +     V    +I   + DEL   +   R V+VA +  + ++FY+SGV S  KC     ++NH VV VG
Sbjct:  114 DWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYDNDGCNGGWMDSAFEYVADNGLAEAKD-YPYTAKDGTCKTSVKRPYTHVQGFKDI--DSCDELAQTI-QERTVAVAVD-ANPWQFYRSGVLS--KC---TKNLNHGVVLVG 271          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.675e-22
Identity = 67/183 (36.61%), Postives = 100/183 (54.64%), Query Frame = 3
Query:   54 KGNHKLTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            K N K     +PE  D+RE GI+   KDQG CGSCW F++ G++E+ + +     +S SEQ++VDC++  +N GC+GG P  +F Y+  N  L   + Y Y  KD +   +        L S+      E++L  A+  V P+SV   V + F  Y  GVY+ T C     ++NH+V+ VGYG
Sbjct:  323 KRNEKDIFSKVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNIESVFAKKNKNILSFSEQEVVDCSK--DNFGCDGGHPFYSFLYVLQN-ELCLGDEYKYKAKDDMFCLNYRCKRKVSLSSIGAV--KENQLILALNEVGPLSVNVGVNNDFVAYSEGVYNGT-CSE---ELNHSVLLVGYG 496          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.269e-22
Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAY-HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAE-DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            P+++D+R      P KDQG+CGSCW F+  G+ E  Y H      IS SEQQ+VDC+    N GC+GG P  AF Y+  N G+   + YPY G +    F   N    +L  V+     + +EL  A+  V PV++A    + F  Y  GV+     G    ++NH+V+ VGYG
Sbjct:  264 PDSRDYRSKFNFLPPKDQGNCGSCWAFAAIGNFEYLYVHTRHEMPISFSEQQMVDCST--ENYGCDGGNPFYAFLYM-INNGVCLGDEYPYKGHE---DFFCLNYRCSLLGRVHFIGDVKPNELIMALNYVGPVTIAVGASEDFVLYSGGVFD----GECNPELNHSVLLVGYG 427          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.069e-21
Identity = 64/180 (35.56%), Postives = 94/180 (52.22%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK------FSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            +PE  DWR+ G ++PVK+QG CGSCW FS   ++E       G     SEQ+L+DC +   + GCNGG P  A + +    G+     YPY G    C+      ++++  GV+ +   N     E  L +++   +PVSV  E     F+ Y+ G++    CGN    V+HAV AVGYG
Sbjct:  134 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDR--RSYGCNGGYPWSALQLVA-QYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYN-----EGALLYSIA-NQPVSVVLEAAGKDFQLYRGGIFVG-PCGN---KVDHAVAAVGYG 300          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.397e-21
Identity = 62/176 (35.23%), Postives = 93/176 (52.84%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVG-VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 611
            P   DWR+   ++ +K+Q  CG+CW F+T  S+E+ Y       I LSEQQ++DC   + + GC+GGL   AFE +   G L  E  YPY G +  C+   +  G V+V       +  E++L+  +  V P+ +A +   G   Y  G+     C N    +NHAV+ VGYGVE+
Sbjct:  117 PLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDC--DYVDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGVVKVKGCYRYVVFREEKLKDLLRAVGPIPMAID-ASGIVNYHHGIIH--YCEN--YGLNHAVLLVGYGVEN 285          
The following BLAST results are available for this feature:
BLAST of CN188910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
CYSP_PLAVS2.302e-2439.25Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
PAPA2_CARPA3.007e-2437.08Chymopapain OS=Carica papaya PE=1 SV=2[more]
CYSP_TRYCR5.129e-2436.59Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATV_NPVEP1.143e-2337.43Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
PAPA4_CARPA2.545e-2338.12Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CATL1_PARTE2.545e-2341.07Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CYSP_PLAFA3.675e-2236.61Trophozoite cysteine proteinase OS=Plasmodium falc... [more]
CYSP_PLAVN6.269e-2237.36Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
PAPA1_CARPA1.069e-2135.56Papain OS=Carica papaya PE=1 SV=1[more]
CATV_NPVBS1.397e-2135.23Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188910 ID=CN188910; Name=CN188910; organism=Citrus sinensis; type=EST; length=614bp
GACGGTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACT
ACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGA
CTGGAGGGAATCTGGCATATTAAGCCCAGTTAAAGACCAAGGTCACTGTG
GATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCAC
CAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTG
TGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAG
CCTTTGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATAT
CCCTACACCGGAAAAGATGGTGTCTGCAAATTCTCATCTGAAAATGTTGG
CGTCCAAGTCCTGGACTCAGTCAACATTACCTTGGGTGCTGAAGATGAAT
TACAGCATGCAGTTGGTCTTGTTCGACCTGTGAGTGTGGCATTTGAAGTA
GTAGATGGATTCCGATTTTACAAGAGTGGAGTTTACAGCAGCACTAAATG
TGGAAATACTCCCATGGATGTGAACCATGCTGTCGTTGCTGTTGGGTACG
GAGTTGAAGATGGT
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