CN188910

Overview
NameCN188910
Unique NameCN188910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:500..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.215e-41
Identity = 84/175 (48.00%), Postives = 114/175 (65.14%), Query Frame = 3
Query:   93 TKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            +KDWR  G ++PVK+QG CG CW+FSTTGS E A+ Q+ G+ +SLSEQ L+DC+    N GC+GGL + AFEYI  N G+DTE +YPY  ++G C++ SEN G  +     +T G+E  L+ AV  V PVSVA +     F+ Y SG+Y   +C +  +D  H V+AVGYG   G
Sbjct:  115 SKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCST--ENSGCDGGLMTYAFEYIINNNGIDTESSYPYKAENGKCEYKSENSGATLSSYKTVTAGSESSLESAVN-VNPVSVAIDASHQSFQLYTSGIYYEPECSSENLD--HGVLAVGYGSGSG 284          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.587e-41
Identity = 85/175 (48.57%), Postives = 114/175 (65.14%), Query Frame = 3
Query:   93 TKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG---ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            T DWR  G ++P+K+QG CG CW+FSTTGS E A+  A G     +SLSEQ L+DC++++ N GC GGL + AFEYI  N G+DTE +YPYT +DG  CKF + N+G Q++   N+T G+E  LQ A     PVSVA +   + F+ Y+SG+Y    C  T +D  H V+ VGYG
Sbjct:  114 TVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKECKFKTSNIGAQIVSYQNVTSGSEASLQSASNNA-PVSVAIDASNESFQLYESGIYYEPACSPTQLD--HGVLVVGYG 285          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.587e-41
Identity = 88/176 (50.00%), Postives = 109/176 (61.93%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            +P++ DWRE G ++PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+ A  NQGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E  L  AV  V P+SVA +      +FY SG+Y    C +  +D  H V+ VGYG E
Sbjct:  114 IPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIP-QQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLD--HGVLLVGYGYE 286          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.029e-40
Identity = 84/177 (47.46%), Postives = 112/177 (63.28%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            +P++ DWRE G ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  N+GCNGGL   AF Y+K NGGLD+EE+YPY G+D   C +  E         V++    E  L  AV  + P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E
Sbjct:  114 IPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLP-QREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSS--KDLDHGVLVVGYGFE 287          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.343e-40
Identity = 84/176 (47.73%), Postives = 115/176 (65.34%), Query Frame = 3
Query:   99 DWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG--ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            DWR  G ++P+K+QG CG CW+FSTTG+ E A + A GK   +SLSEQ L+DC+ ++ N GC GGL + AFEYI  N G+DTE +YPYT +DG  CKF+ +NV  Q+   VN+T G+E +L   V    P SVA +  +  F+ Y SG+Y+   C +T +D  H V+AVG+G   G
Sbjct:  115 DWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDCSGSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKKCKFNPKNVAAQLSSYVNVTSGSESDLAAKV-TQGPTSVAIDASNQSFQLYVSGIYNEPACSSTQLD--HGVLAVGFGTGSG 287          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.754e-40
Identity = 90/201 (44.78%), Postives = 112/201 (55.72%), Query Frame = 3
Query:    9 QRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            +RH L      + TT     + ADV     DWR  G ++PVKDQG CGSCW FS   +LE A+    G  +SLSEQ LVDC+ ++ NQGCNGG P QA++YI  N G+DTE +YPY   D  C++ + N+G  V   V    G E  LQHAV    PVSV  +     F  Y  GVY    C +     NHAV AVGYG +
Sbjct:   90 RRHPLSVLPKSAPTTP----MAADV-----DWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDS--WYANHAVTAVGYGTD 279          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.909e-40
Identity = 85/177 (48.02%), Postives = 111/177 (62.71%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            +P++ DWRE G ++ VK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++   NQGCNGGL   AF+Y+K NGGLDTEE+YPY G++   C +  E         V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E
Sbjct:  114 VPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSS--KDLDHGVLVVGYGFE 287          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.667e-40
Identity = 82/171 (47.95%), Postives = 107/171 (62.57%), Query Frame = 3
Query:   99 DWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            DWR   +++PVKDQ  CGSCW FS TG+LE  +     + +SLSEQQLVDC+  + N GC GG  + AF+YIK NGG+DTE +YPY  +D  C+F + ++G     SV +    E+ LQ AV  V P+SVA +     F+FY SGVY    C  T +D  H V+AVGYG E
Sbjct:  111 DWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSCRFDANSIGAICTGSVEVQ-HTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLD--HGVLAVGYGTE 278          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 8.707e-40
Identity = 80/184 (43.48%), Postives = 115/184 (62.50%), Query Frame = 3
Query:   60 NHKLTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG--ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            + K+   V   + DWR  G ++P+K+QG CG CW+FS TG+ E A + A G     S+SEQQL+DC+ ++ N GC GGL + AFEYI  NGG+DTE +YP+T     CK++  N+G ++   VN+T G+E +L   V    P SVA +     F+FY SG+Y+   C +T +D  H V+AVG+G
Sbjct:  104 SEKVFGGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCSGSYGNNGCEGGLMTLAFEYIINNGGIDTESSYPFTANTEKCKYNPSNIGAELSSYVNVTSGSESDLAAKV-TQGPTSVAIDASQPSFQFYSSGIYNEPACSSTQLD--HGVLAVGFG 284          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 162.54 bits (410), Expect = 1.485e-39
Identity = 85/177 (48.02%), Postives = 110/177 (62.15%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            +P++ DW + G ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  NQGCNGGL   AF+YIK NGGLD+EE+YPY   D   C +  E         V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E
Sbjct:  114 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSS--KDLDHGVLVVGYGFE 287          
The following BLAST results are available for this feature:
BLAST of CN188910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
CYSP5_DICDI1.215e-4148.00Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CYSP4_DICDI1.587e-4148.57Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CATL1_MOUSE1.587e-4150.00Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATL1_CANFA1.029e-4047.46Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CYSP7_DICDI1.343e-4047.73Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
CRUST_PANBO1.754e-4044.78Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATL1_PIG3.909e-4048.02Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CYSP3_HOMAM6.667e-4047.95Digestive cysteine proteinase 3 OS=Homarus america... [more]
CYSP6_DICDI8.707e-4043.48Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
CATL1_BOVIN1.485e-3948.02Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188910 ID=CN188910; Name=CN188910; organism=Citrus sinensis; type=EST; length=614bp
GACGGTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACT
ACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGA
CTGGAGGGAATCTGGCATATTAAGCCCAGTTAAAGACCAAGGTCACTGTG
GATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCAC
CAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTG
TGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAG
CCTTTGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATAT
CCCTACACCGGAAAAGATGGTGTCTGCAAATTCTCATCTGAAAATGTTGG
CGTCCAAGTCCTGGACTCAGTCAACATTACCTTGGGTGCTGAAGATGAAT
TACAGCATGCAGTTGGTCTTGTTCGACCTGTGAGTGTGGCATTTGAAGTA
GTAGATGGATTCCGATTTTACAAGAGTGGAGTTTACAGCAGCACTAAATG
TGGAAATACTCCCATGGATGTGAACCATGCTGTCGTTGCTGTTGGGTACG
GAGTTGAAGATGGT
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