CN188910

Overview
NameCN188910
Unique NameCN188910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.940e-39
Identity = 83/176 (47.16%), Postives = 109/176 (61.93%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            +P++ DW + G ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVD ++   NQGCNGGL   AF+YIK NGGLD+EE+YPY   D  C +  E    +    V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E
Sbjct:    1 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRPQGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATDTSCNYKPEYSAAKDTGFVDIP-QREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSS--KDLDHGVLVVGYGFE 173          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.533e-39
Identity = 82/176 (46.59%), Postives = 114/176 (64.77%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            P++ DWR    ++P+KDQG CGSCW+FSTTGS E A+     K +SLSEQ LVDC+    N GC+GGL + AF+YI  N G+DTE +YPYT + G  C F+  ++G  +   VNIT G+E  L++      PVSVA +   + F+ Y SG+Y   KC  +P +++H V+ VGYGV+
Sbjct:  124 PKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCSGPEENFGCDGGLMNNAFDYIIKNKGIDTESSYPYTAETGSTCLFNKSDIGATIKGYVNITAGSEISLENG-AQHGPVSVAIDASHNSFQLYTSGIYYEPKC--SPTELDHGVLVVGYGVQ 296          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.533e-39
Identity = 83/175 (47.43%), Postives = 106/175 (60.57%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            P + DWRE G ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    N+GCNGGL   AF+Y+  NGGLD+EE+YPY   +  CK++ E         V+I    E  L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E
Sbjct:  115 PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKYNPEYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMD--HGVLVVGYGFE 286          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 5.644e-39
Identity = 83/178 (46.63%), Postives = 116/178 (65.17%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK-DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            P   DWRE   ++PVKDQG CGSC++FSTTGS+E       GK +SLSEQ ++DC+ +F N+GCNGGL + AFEYI  N GL++EE YPY  K +  CKF   +V  ++     I  G E++LQ+A+ L+ PVSVA +   + F+ Y +GVY    C +   D++H V+AVG G ++G
Sbjct:  122 PLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDECKFQEGSVAAKITSYKEIEAGDENDLQNAL-LLNPVSVAIDASHNSFQLYTAGVYYEPACSSE--DLDHGVLAVGMGTDNG 296          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 9.627e-39
Identity = 82/175 (46.86%), Postives = 107/175 (61.14%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            P + DWRE G ++PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N+GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E
Sbjct:  115 PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFE 286          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.257e-38
Identity = 82/176 (46.59%), Postives = 110/176 (62.50%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            +P+  DWR+ G ++PVK+QGHC S W FS TGSLE    +   + I LSEQ L+DC  +    GC+GG    AF+Y+K NGGL TEE+YPY G+   C++ +EN    V D V I  G+E+ L  AV  V P+SVA +   G F+FY SG+Y   +C    + +NHAV+ VGYG E
Sbjct:  114 VPKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGRECRYHAENSAANVRDFVQIP-GSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKR--VHLNHAVLVVGYGFE 286          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.642e-38
Identity = 84/177 (47.46%), Postives = 109/177 (61.58%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            +P++ DW + G ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  NQGCNGGL   AF+YIK NG LD+EE+YPY   D   C +  E         V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E
Sbjct:  114 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSS--KDLDHGVLVVGYGFE 287          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.642e-38
Identity = 80/176 (45.45%), Postives = 103/176 (58.52%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            LP+ KDWRE G ++PV++QG CGSCW F+  G++E       G    LS Q L+DC++   N+GC  G   QAFEY+  N GL+ E  YPY GKDG C++ SEN    + D VN+    E  L  AV  + PVS A +   D FRFY  G+Y    C +    VNHAV+ VGYG E
Sbjct:  114 LPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKDGPCRYRSENASANITDYVNLPPN-ELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYYEPNCSS--YFVNHAVLVVGYGSE 286          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.658e-38
Identity = 80/177 (45.20%), Postives = 104/177 (58.76%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            P   DWR  G ++PVKDQG CGSCW FS+ G+LE    +  GK +SLS Q LV C    NN GC GG  + AFEY++ N G+D+E+AYPY G+D  C +S      +      I    E  L+ AV  + PVSV  +  +  F+FY  GVY  T C   P ++NHAV+AVGYG + G
Sbjct:  121 PAAVDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYCVS--NNNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQDESCMYSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDTGC--NPENINHAVLAVGYGAQKG 293          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.778e-38
Identity = 87/181 (48.07%), Postives = 116/181 (64.09%), Query Frame = 3
Query:   78 DVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            D LPE+ DWRE G+L  VKDQG CGSCW FS   ++E+      G  ISLSEQ+LVDC +++ N+GC+GGL   AFE++  NGG+DTEE YPY  ++GVC    +N  V  +DS  ++ +  E  LQ AV   +PVS+A E     F+ YKSG+++  KCG     V+H VV  GYG E+G
Sbjct:   16 DSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSY-NEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVA-HQPVSIALEAGGRDFQHYKSGIFTG-KCGTA---VDHGVVIAGYGTENG 190          
The following BLAST results are available for this feature:
BLAST of CN188910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
CATL1_SHEEP1.940e-3947.16Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CYSP2_DICDI2.533e-3946.59Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CATL1_CERAE2.533e-3947.43Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CYSP3_DICDI5.644e-3946.63Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CATL1_HUMAN9.627e-3946.86Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
TEST2_RAT1.257e-3846.59Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CATL2_BOVIN1.642e-3847.46Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATJ_MOUSE1.642e-3845.45Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CATK_CHICK3.658e-3845.20Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
CYSPL_SOLLC4.778e-3848.07Low-temperature-induced cysteine proteinase (Fragm... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188910 ID=CN188910; Name=CN188910; organism=Citrus sinensis; type=EST; length=614bp
GACGGTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACT
ACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGA
CTGGAGGGAATCTGGCATATTAAGCCCAGTTAAAGACCAAGGTCACTGTG
GATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCAC
CAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTG
TGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAG
CCTTTGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATAT
CCCTACACCGGAAAAGATGGTGTCTGCAAATTCTCATCTGAAAATGTTGG
CGTCCAAGTCCTGGACTCAGTCAACATTACCTTGGGTGCTGAAGATGAAT
TACAGCATGCAGTTGGTCTTGTTCGACCTGTGAGTGTGGCATTTGAAGTA
GTAGATGGATTCCGATTTTACAAGAGTGGAGTTTACAGCAGCACTAAATG
TGGAAATACTCCCATGGATGTGAACCATGCTGTCGTTGCTGTTGGGTACG
GAGTTGAAGATGGT
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