CN188910

Overview
NameCN188910
Unique NameCN188910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 6.899e-37
Identity = 75/177 (42.37%), Postives = 110/177 (62.15%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            P++ D+R+ G ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+ AV  V P+SVA +  +  F+FY+ GVY    C +   ++NHAV+AVGYG++ G
Sbjct:  116 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSD--NLNHAVLAVGYGIQKG 288          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 9.011e-37
Identity = 75/177 (42.37%), Postives = 109/177 (61.58%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            P++ D+R+ G ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+ AV  V P+SVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G
Sbjct:  117 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSD--NLNHAVLAVGYGIQKG 289          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.177e-36
Identity = 76/177 (42.94%), Postives = 109/177 (61.58%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            P++ D+R+ G ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G
Sbjct:  117 PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSD--NLNHAVLAVGYGIQKG 289          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.177e-36
Identity = 75/178 (42.13%), Postives = 110/178 (61.80%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            +P++ D+R+ G ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ NGG+D+E+AYPY G+D  C +++     +      I +G E  L+ AV  V P+SV+ +  +  F+FY  GVY    C     +VNHAV+ VGYG + G
Sbjct:  115 VPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVT--ENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKG 288          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.177e-36
Identity = 80/190 (42.11%), Postives = 104/190 (54.74%), Query Frame = 3
Query:   42 SATTKGNHKLTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            + T     K  +  LP  KDWR+ G ++PV++QG CGSCW F+  G++E       G    LS Q L+DC+++  N GC  G   QAF Y+  N GL+ E  YPY GKDG C++ SEN    +   VN+    E  L  AV  + PVS A +   D FRFY  GVY    C +    VNHAV+ VGYG E
Sbjct:  100 AVTNPSAQKQVSIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDCSKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKDGPCRYHSENASANITGFVNLPPN-ELYLWVAVASIGPVSAAIDASHDSFRFYSGGVYHEPNCSS--YVVNHAVLVVGYGFE 286          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.537e-36
Identity = 87/201 (43.28%), Postives = 126/201 (62.69%), Query Frame = 3
Query:   18 RLGAAQNCSATTKGNHKLTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            R+  A+N +   K +  +  D +P T DWR+ G ++ +KDQG CGSCW FST  ++E       G+ +SLSEQ+LVDC +++ NQGCNGGL   AF++I  NGGL+TE+ YPY G +G C    +N  V  +D   ++    E  L+ AV   +PVSVA +     F+ Y+SG+++  KCG    +++HAVVAVGYG E+G
Sbjct:   80 RITKAKNVNM--KYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSY-NQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVS-YQPVSVAIDAGGRAFQHYQSGIFTG-KCGT---NMDHAVVAVGYGSENG 272          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.007e-36
Identity = 75/177 (42.37%), Postives = 109/177 (61.58%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            P++ D+R+ G ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G
Sbjct:  116 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKG 288          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.007e-36
Identity = 75/177 (42.37%), Postives = 109/177 (61.58%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            P++ D+R+ G ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G
Sbjct:  116 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKG 288          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.007e-36
Identity = 75/177 (42.37%), Postives = 109/177 (61.58%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            P++ D+R+ G ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G
Sbjct:  116 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKG 288          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.424e-36
Identity = 78/179 (43.58%), Postives = 106/179 (59.22%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            LP++ DWRE G ++ VK QG CG+CW FS  G+LEA      GK +SLS Q LVDC+ + + N+GCNGG  + AF+YI  N G+D+E +YPY   +G C++ S+           +  G+ED L+ AV    PVSVA +     F  Y+SGVY    C     +VNH V+ VGYG  +G
Sbjct:  115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSC---TQNVNHGVLVVGYGNLNG 290          
The following BLAST results are available for this feature:
BLAST of CN188910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
CATK_BOVIN6.899e-3742.37Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CATK_CANFA9.011e-3742.37Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATK_PIG1.177e-3642.94Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATK_MOUSE1.177e-3642.13Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATJ_RAT1.177e-3642.11Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CYSP4_BRANA1.537e-3643.28Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CATK_MACMU2.007e-3642.37Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA2.007e-3642.37Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN2.007e-3642.37Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATS_CANFA3.424e-3643.58Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188910 ID=CN188910; Name=CN188910; organism=Citrus sinensis; type=EST; length=614bp
GACGGTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACT
ACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGA
CTGGAGGGAATCTGGCATATTAAGCCCAGTTAAAGACCAAGGTCACTGTG
GATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCAC
CAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTG
TGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAG
CCTTTGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATAT
CCCTACACCGGAAAAGATGGTGTCTGCAAATTCTCATCTGAAAATGTTGG
CGTCCAAGTCCTGGACTCAGTCAACATTACCTTGGGTGCTGAAGATGAAT
TACAGCATGCAGTTGGTCTTGTTCGACCTGTGAGTGTGGCATTTGAAGTA
GTAGATGGATTCCGATTTTACAAGAGTGGAGTTTACAGCAGCACTAAATG
TGGAAATACTCCCATGGATGTGAACCATGCTGTCGTTGCTGTTGGGTACG
GAGTTGAAGATGGT
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