CN188910

Overview
NameCN188910
Unique NameCN188910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:500..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.472e-36
Identity = 86/182 (47.25%), Postives = 110/182 (60.44%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFN-------NQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            LPE  DWRE G ++PVKDQG CGSCW FSTTG+LE A++ A GK +SLSEQQLVDC    +       + GCNGGL + AFEY+  +GG+  E+ Y YTG+DG CKF    V   V +   +TL   DE Q A  LV+  P++VA       + Y SGV     C  + +D  H V+ VG+G
Sbjct:  132 LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGSCKFDKSKVVASVSNFSVVTL---DEDQIAANLVKNGPLAVAINAA-WMQTYMSGVSCPYVCAKSRLD--HGVLLVGFG 307          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 7.628e-36
Identity = 83/180 (46.11%), Postives = 112/180 (62.22%), Query Frame = 3
Query:   78 DVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 611
            D LP++ DWRE+G + PVK+QG CGSCW FST  ++E       G  ISLSEQQLVDC  A  N GC GG  + AF++I  NGG+++EE YPY G+DG+C  S+ N  V  +DS  N+    E  LQ AV   +PVSV  +     F+ Y+SG+++    G+  +  NHA+  VGYG E+
Sbjct:    1 DDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA--NHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQDGICN-STVNAPVVSIDSYENVPSHNEQSLQKAVA-NQPVSVTMDAAGRDFQLYRSGIFT----GSCNISANHALTVVGYGTEN 172          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.786e-35
Identity = 74/178 (41.57%), Postives = 104/178 (58.43%), Query Frame = 3
Query:   78 DVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            D LP+  DWR  G ++ V+ QG C SCW F  TG++E    +  GK I LS Q L+DC++   N+GC  G    AF+Y+ +NGGL+ E  YPY  K+GVC+++ +N   ++   V +   +ED L  AV    P++    V+   FRFY+ GVY   KC +    VNHAV+ VGYG E
Sbjct:  123 DALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKEGVCRYNPKNSSAKITGFV-VLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSY---VNHAVLVVGYGFE 296          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.944e-35
Identity = 75/179 (41.90%), Postives = 103/179 (57.54%), Query Frame = 3
Query:   81 VLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            +LP++ DWRE G ++ VK QG CG+CW FS  G+LEA      GK +SLS Q LVDC++ + N+GCNGG  ++AF+YI  N G+D+E +YPY   D  C++ S+           +  G ED L+ AV    PV V  +     F  Y+SGVY    C      VNH V+ +GYG  +G
Sbjct:  114 MLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPAC---TQKVNHGVLVIGYGDLNG 289          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.102e-34
Identity = 80/180 (44.44%), Postives = 112/180 (62.22%), Query Frame = 3
Query:   78 DVLPETKDWRESG-ILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 608
            + LP++ DWR+ G +++PVK+QG CGSCW FS   ++E       G+ +SLSEQ+LV+CA+   N GCNGG+   AF +I  NGGLDTEE YPYT  DG C  +  +  V  +D   ++    E  LQ AV   +PVSVA +     F+ Y SGV++  +CG    +++H VVAVGYG +
Sbjct:  153 EALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVA-HQPVSVAIDAGGREFQLYDSGVFTG-RCGT---NLDHGVVAVGYGTD 327          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.102e-34
Identity = 83/183 (45.36%), Postives = 112/183 (61.20%), Query Frame = 3
Query:   78 DVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKF-SSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            DVLP+  DWR +G +  VKDQG+CGSCW FS  G++E       G+ ISLSEQ+LVDC + F N GC+GG+ + AFE+I  NGG++T++ YPY   D G+C    + N  V  +D   ++    E  L+ AV   +PVSVA E     F+ YKSGV + T CG   + ++H VV VGYG   G
Sbjct:  128 DVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVA-HQPVSVAIEASSQAFQLYKSGVMTGT-CG---ISLDHGVVVVGYGSTSG 305          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.879e-34
Identity = 82/207 (39.61%), Postives = 111/207 (53.62%), Query Frame = 3
Query:    6 FQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            F+   LG     + T   N        VLP   DWR +G +  +K QG CG CW FS   ++E       G  ISLSEQ+L+DC +  N +GCNGG  +  F++I  NGG++TEE YPYT +DG C    +N     +D+  N+    E  LQ AV   +PVSVA +   D F+ Y SG+++   CG     ++HAV  VGYG E G
Sbjct:   99 FRSTYLGFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNLDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAGDAFKHYSSGIFTG-PCGTA---IDHAVTIVGYGTEGG 300          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.454e-34
Identity = 79/178 (44.38%), Postives = 104/178 (58.43%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            LP++ DWR+ G ++PVKDQG CGSCW FST  ++E       G   SLSEQ+L+DC   FN+ GCNGGL   AF+YI   GGL  E+ YPY  ++G+C+   E+V    +         +DE        +PVSVA E     F+FYK GV++  KCG    D++H V AVGYG   G
Sbjct:  137 LPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNS-GCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNG-KCGT---DLDHGVAAVGYGSSKG 309          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 144.821 bits (364), Expect = 3.205e-34
Identity = 80/201 (39.80%), Postives = 109/201 (54.23%), Query Frame = 3
Query:   18 RLGAAQNCSATTKGNHKLTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            R  +  N +  +         VLP   DWR +G +  +K QG CG CW FS   ++E       G  ISLSEQ+L+DC +  N +GCNGG  +  F++I  NGG++TEE YPYT +DG C    +N     +D+  N+    E  LQ AV   +PVSVA +   D F+ Y SG+++   CG     V+HAV  VGYG E G
Sbjct:  105 RFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAGDAFKQYSSGIFTG-PCGTA---VDHAVTIVGYGTEGG 300          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 4.186e-34
Identity = 76/180 (42.22%), Postives = 104/180 (57.78%), Query Frame = 3
Query:   81 VLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            +LP++ DWRE G ++ VK QG CG+CW FS  G+LEA      GK +SLS Q LVDC+ + + N+GCNGG  + AF+YI  N G+D++ +YPY   D  C++ S+           +  G ED L+ AV    PVSV  +     F  Y+SGVY    C     +VNH V+ VGYG  +G
Sbjct:  114 ILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC---TQNVNHGVLVVGYGDLNG 290          
The following BLAST results are available for this feature:
BLAST of CN188910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
CYSP_PEA4.472e-3647.25Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CPGP2_ZINOF7.628e-3646.11Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CATQ_RAT3.786e-3541.57Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATS_SAIBB4.944e-3541.90Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CYSP1_ORYSJ1.102e-3444.44Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CPR1_ARATH1.102e-3445.36Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
ACTN_ACTDE1.879e-3439.61Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
XCP1_ARATH2.454e-3444.38Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
ACTN_ACTCH3.205e-3439.80Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CATS_HUMAN4.186e-3442.22Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188910 ID=CN188910; Name=CN188910; organism=Citrus sinensis; type=EST; length=614bp
GACGGTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACT
ACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGA
CTGGAGGGAATCTGGCATATTAAGCCCAGTTAAAGACCAAGGTCACTGTG
GATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCAC
CAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTG
TGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAG
CCTTTGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATAT
CCCTACACCGGAAAAGATGGTGTCTGCAAATTCTCATCTGAAAATGTTGG
CGTCCAAGTCCTGGACTCAGTCAACATTACCTTGGGTGCTGAAGATGAAT
TACAGCATGCAGTTGGTCTTGTTCGACCTGTGAGTGTGGCATTTGAAGTA
GTAGATGGATTCCGATTTTACAAGAGTGGAGTTTACAGCAGCACTAAATG
TGGAAATACTCCCATGGATGTGAACCATGCTGTCGTTGCTGTTGGGTACG
GAGTTGAAGATGGT
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