CN188910

Overview
NameCN188910
Unique NameCN188910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:500..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.646e-30
Identity = 78/176 (44.32%), Postives = 102/176 (57.95%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 611
            +P++ DWR+   ++ VK Q  CGSCW FS   ++E+ YH      + LSEQQLVDC +   N GCNGGL S AFE I   GG+  E  YPYTG DGVCK ++    VQ+       L +E +L+  +    PVSVA +VVD    YKSGV    K  +    +NH V+ VGYG E+
Sbjct:  133 VPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCDKV--NNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVCKNTTRY--VQLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVD-LTNYKSGV---AKHCSVDHGLNHGVLLVGYGQEN 300          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.808e-30
Identity = 69/174 (39.66%), Postives = 97/174 (55.75%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            LP+  +W++ G ++PV+ QG C SCW FS TG++E    +  G+ I LS Q LVDC++   N GC  G    A  Y+  NGGL++E  YPY  KDG C++S EN    +          ED L +AV  + P+SVA +     F FYK G+Y    C +    V H+++ VGYG
Sbjct:  114 LPKFINWKKRGYVTPVQTQGRCNSCWAFSVTGAIEGQMFRKTGQLIPLSVQNLVDCSRPQGNWGCYLGNTYLALHYVMENGGLESEATYPYEEKDGSCRYSPENSTANI-TGFEFVPKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCV--VTHSMLLVGYG 284          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.255e-30
Identity = 76/178 (42.70%), Postives = 100/178 (56.18%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            LP   DWR  G ++ +K+Q  CGSCW FS   ++E+      G+ ISLSEQ+LVDC  A  + GCNGG  + AF+YI  NGG+DT++ YPY+   G CK     V V +     +T   E  LQ AV   +PVSV  E     F+ Y SG+++   CG      NH VV VGYG + G
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA--SHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQGSCKPYRLRV-VSINGFQRVTRNNESALQSAVA-SQPVSVTVEAAGAPFQHYSSGIFTG-PCGTAQ---NHGVVIVGYGTQSG 170          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.169e-30
Identity = 77/196 (39.29%), Postives = 106/196 (54.08%), Query Frame = 3
Query:   42 SATTKGNHKLTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFG---KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            S   KG  +      P+  DWR+ G ++P++DQG+CGSC+TF +  +LE       G   + + LSE+ +V C +   N GCNGGL S  + YI  N G+  E  YPYTG D  C+ S      ++     +    E EL+ A+  GLV  VS+    V  F+ YKSG Y+ T+C N    +NH V AVGYGV DG
Sbjct:   80 SGEEKGEVRYLNIQAPKAVDWRKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMEN-GIAKESDYPYTGSDSTCR-SDVKAFAKIKSYNRVARNNEVELKAAISQGLV-DVSIDASSVQ-FQLYKSGAYTDTQCKNNYFALNHEVCAVGYGVVDG 271          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.067e-29
Identity = 73/175 (41.71%), Postives = 99/175 (56.57%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVN-ITLGAEDELQHAVGLVRPVSVAFE-VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            LP+  DWR  G ++PV++QG CGSC+ F+T  +LEA + Q  G+ + LS Q +VDC +   N GC+GG    AF+Y     G+  E  YPY G +  C++  +++ V   +  N I  G E  L+HAV    PV V        FRFYK GVYS   CG      +HAV+AVGYG
Sbjct:  182 LPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLGNNGCSGGYMPTAFQYAS-RYGIAMESRYPYVGTEQRCRW-QQSIAVVTDNGFNEIQPGDELALKHAVAKRGPVVVGISGSKRSFRFYKDGVYSEGNCGRP----DHAVLAVGYG 350          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.067e-29
Identity = 70/175 (40.00%), Postives = 105/175 (60.00%), Query Frame = 3
Query:   78 DVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            D+ P   DWR+ G ++ VK+QG CGSCW FS TG++E  +    G  +SLSEQ+L+DC +   ++ C GGLPS A+  IK  GGL+TE+ Y Y G    C FS++   V + DSV ++   E+++   +    P+SVA     G +FY+ G+    +   +P  ++HAV+ VGYG
Sbjct:  247 DLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKV--DKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFSAQMAKVYINDSVELSRN-ENKIAAWLAQKGPISVAINAF-GMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYG 417          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.377e-29
Identity = 64/176 (36.36%), Postives = 103/176 (58.52%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 611
            LP+  DWR++  ++P+KDQG CGSCW F   G++E+ Y     K I LSEQQL+DC +   + GCNGGL   AF+ +   GG++TE  YPY G + +C   +  + V++       +  E++L+  V    PV++A + +D    Y+ G+ +         D+NHAV+ +G+G+E+
Sbjct:  156 LPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDEV--DLGCNGGLMHLAFQELLLMGGVETEADYPYQGSEQMCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIIN-YRRGILNQCHI----YDLNHAVLLIGWGIEN 324          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.295e-29
Identity = 75/182 (41.21%), Postives = 100/182 (54.95%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG---ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            PE+ DWR  G ++P++DQ  CGSC+TF +  +LE       G     + LSE+ LV C +   N GCNGGL S  ++YI  NG +  E  YPYTG D  CK ++     ++     +    E EL+ A+  GLV    V+ +     F+ YKSG YS TKC N    +NH V AVGYGV DG
Sbjct:   88 PESVDWRAQGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRDNGNNGCNGGLGSNVYDYIIQNG-VAKESDYPYTGTDSTCK-TNVKAFAKITGYNKVPRNNEAELKAALSQGLV---DVSIDASSAKFQLYKSGAYSDTKCKNNFFALNHEVCAVGYGVVDG 264          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.032e-29
Identity = 73/181 (40.33%), Postives = 101/181 (55.80%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFG---KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            PE+ DWR+ G ++P++DQ  CGSC+TF +  +LE       G     + LSE+ +V C +   N GCNGGL S  ++YI    G+  E  YPYTG D  CK + ++   ++     +    E EL+ A+  GLV  VS+       F+ YKSG Y+ TKC N    +NH V AVGYGV DG
Sbjct:   95 PESVDWRKEGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYI-IEHGVAKESDYPYTGSDSTCKTNVKSF-AKITGYTKVPRNNEAELKAALSQGLV-DVSIDASSAK-FQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDG 271          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.032e-29
Identity = 81/204 (39.71%), Postives = 114/204 (55.88%), Query Frame = 3
Query:   18 RLGAAQNCSATTKGNHKLTA------DVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 611
            RLG  +N SA T     +         +LPET DWR+   ++PVK+Q  CGSCW FST  ++E+ Y+  + K ++LSEQ LV+C     N GC GGL   A E I   GG+ + E  PY G DGVCK S   + +    S    L  E++L+  + +  P+SVA +V D    YK+G+  +  C N    +NHAV+ VGYGV++
Sbjct:   96 RLGLKKNPSAFTMTECSVVVIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCDNI--NNGCAGGLMHWALESILQEGGVVSAENEPYYGFDGVCKKSPFELSIS--GSRRYVLQNENKLRELLVVNGPISVAIDVSDLIN-YKAGI--ADICENNE-GLNHAVLLVGYGVKN 291          
The following BLAST results are available for this feature:
BLAST of CN188910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
CATV_GVXN1.646e-3044.32Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATM_MOUSE2.808e-3039.66Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
ERVB_TABDI6.255e-3042.70Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CPP1_ENTHI8.169e-3039.29Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CATL_BRUPA1.067e-2941.71Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CATF_MOUSE1.067e-2940.00Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CATV_NPVHZ2.377e-2936.36Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CPP3_ENTHI5.295e-2941.21Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
CPP2_ENTHI9.032e-2940.33Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CATV_GVCP9.032e-2939.71Viral cathepsin OS=Cydia pomonella granulosis viru... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188910 ID=CN188910; Name=CN188910; organism=Citrus sinensis; type=EST; length=614bp
GACGGTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACT
ACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGA
CTGGAGGGAATCTGGCATATTAAGCCCAGTTAAAGACCAAGGTCACTGTG
GATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCAC
CAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTG
TGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAG
CCTTTGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATAT
CCCTACACCGGAAAAGATGGTGTCTGCAAATTCTCATCTGAAAATGTTGG
CGTCCAAGTCCTGGACTCAGTCAACATTACCTTGGGTGCTGAAGATGAAT
TACAGCATGCAGTTGGTCTTGTTCGACCTGTGAGTGTGGCATTTGAAGTA
GTAGATGGATTCCGATTTTACAAGAGTGGAGTTTACAGCAGCACTAAATG
TGGAAATACTCCCATGGATGTGAACCATGCTGTCGTTGCTGTTGGGTACG
GAGTTGAAGATGGT
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