CN182148

Overview
NameCN182148
Unique NameCN182148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: MK08_XENLA (Mitogen-activated protein kinase 8 OS=Xenopus laevis GN=mapk8 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.647e-24
Identity = 73/195 (37.44%), Postives = 102/195 (52.31%), Query Frame = -1
Query:  227 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP----NEKVWPGVSSLMN------WHEYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 769
            L+YQ+  G+   H  GI+HRDLKP N+++ +   TLKI D GLAR         T  ++T +YRAPEV+LG   Y   VD+WSV CI  E++    LFPG   + Q   +   LGTP     +K+ P V + +        + + +  P  L  A    +K       DLL +ML  D SKRIS   A++HPY +
Sbjct:  131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMG-YKENVDIWSVGCILGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCTEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDDALQHPYIN 322          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: MPK16_ORYSJ (Mitogen-activated protein kinase 16 OS=Oryza sativa subsp. japonica GN=MPK16 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.927e-24
Identity = 72/193 (37.31%), Postives = 105/193 (54.40%), Query Frame = -1
Query:  221 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRAPEVLLGS--THYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 766
            +YQL +G+ + H   + HRDLKP N+L +     +KI D GLAR     T     +T  + T WYRAPE L GS  + Y+ A+D+WSV CIFAE++    LFPG + + QL  +  LLG+P+ +    + +      L N  + P+      +   P  D   L LLE++L +DP  R +A +A+  PYF  L
Sbjct:  129 LYQLLRGMKYIHAASVFHRDLKPKNILANADCK-VKICDFGLARVSFDDTPSAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSVGCIFAEMLMGKPLFPGKNVVHQLDLMTDLLGSPSGETISRIRNEKARRYLGNMRKKPR---VPFSQKFPGADPMALHLLERLLAFDPKDRPTAAEALTDPYFTGL 316          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: MPK11_ORYSJ (Mitogen-activated protein kinase 11 OS=Oryza sativa subsp. japonica GN=MPK11 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.927e-24
Identity = 77/195 (39.49%), Postives = 109/195 (55.90%), Query Frame = -1
Query:  215 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFT-LPIKKY-THEILTLWYRAPEVLLGSTH--YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN--WHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 766
            +YQ+ + + + H   + HRDLKP N+L +     LKI D GLAR AFT  P   + T  + T WYRAPE L GS +  Y+ A+D+WS+ CIFAE++    LFPG + + QL  I  LLGTP+      +S + N    +Y     +  P S +      D   L LL ++L +DP  R SA++A+  PYF+ L K
Sbjct:  133 LYQMLRALKYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFTDAPTTVFWTDYVATRWYRAPE-LCGSFYSKYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLITDLLGTPS---LDAISQVRNDKARKYLTCMRKKQPASFSHKFLKADPLALQLLRKLLAFDPKDRPSAQEALADPYFNGLAK 322          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CSK2A_SCHPO (Casein kinase II subunit alpha OS=Schizosaccharomyces pombe GN=cka1 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.035e-23
Identity = 61/202 (30.20%), Postives = 107/202 (52.97%), Query Frame = -1
Query:  221 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVWP---------------GVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 778
            ++   Y+L K + FCH  GI+HRD+KPHN+++D K   L++ D GLA  +   + +Y   + + +++ PE+L+    Y  ++D+WS   +FA L+  K   F G     QL+ I ++LGT     +                G     +W+ +   + +SLA      + + +DLL ++L+YD  +R++ ++AM HPYF  L
Sbjct:  137 IRYYSYELLKALDFCHSRGIMHRDVKPHNVMIDHKKRKLRLIDWGLAEFYHAGM-EYNVRVASRYFKGPELLVDFREYDYSLDIWSFGVMFAALIFKKDTFFRGRDNYDQLVKIAKVLGTDELFAYVQKYQIVLDRQYDNILGQYPKRDWYSFVNRDNRSLA------NDEAIDLLNRLLRYDHQERLTCQEAMAHPYFQVL 331          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CDKL3_RAT (Cyclin-dependent kinase-like 3 OS=Rattus norvegicus GN=Cdkl3 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.766e-23
Identity = 60/186 (32.26%), Postives = 98/186 (52.69%), Query Frame = -1
Query:  230 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG--TPNEKVWPGVSSLMNWHEYPQ-WNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 778
            ++  ++Q+ + + + H + I+HRD+KP N+L+ +  +T K+ D G AR    P   YT  + T WYRAPE++L  T Y   VD+W++ C+  E+ T     P  S+L  L  I   +G  TP+       S +      PQ  +P++     P L+    D++   LQ DP++RIS+   + H YF
Sbjct:  102 LRKYLFQILRAIEYLHNNNIIHRDIKPENILVSQSGIT-KLCDFGFARTLAAPGDVYTDYVATRWYRAPELVLKDTTYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVVLPQVQHPKNARKKYPKLNGLLADIVHACLQIDPAERISSTDLLHHDYF 286          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: JNK_DROME (Stress-activated protein kinase JNK OS=Drosophila melanogaster GN=bsk PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.306e-23
Identity = 70/198 (35.35%), Postives = 100/198 (50.51%), Query Frame = -1
Query:  227 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-----------------DLLEQMLQYDPSKRISAKKAMEHPYFD 769
            L+YQ+  G+   H  GI+HRDLKP N+++ +   TLKI D GLAR         T  ++T +YRAPEV+LG   Y+  VD+WSV CI  E++    LFPG   + Q   I   LGTP+      +   +    Y +  P+    +   L  DGL                 +LL +ML  DP +RIS  +A++H Y +
Sbjct:  129 LLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KADCTLKILDFGLARTAGTTFMM-TPYVVTRYYRAPEVILGMG-YTENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIEQLGTPSPSFMQRLQPTV--RNYVENRPRYTGYSFDRLFPDGLFPNDNNQNSRRKASDARNLLSKMLVIDPEQRISVDEALKHEYIN 321          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CDKL3_MACFA (Cyclin-dependent kinase-like 3 OS=Macaca fascicularis GN=CDKL3 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.138e-23
Identity = 59/186 (31.72%), Postives = 98/186 (52.69%), Query Frame = -1
Query:  230 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG--TPNEKVWPGVSSLMNWHEYPQ-WNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 778
            ++  ++Q+ + + + H + I+HRD+KP N+L+ +  +T K+ D G AR    P   YT  + T WYRAPE++L  T Y   VD+W++ C+  E+ T     P  S+L  L  I   +G  +P+ +     S +      PQ  +P++     P L+    D++   LQ DP+ RIS+   + H YF
Sbjct:  102 LRKYLFQILRAIDYLHSNNIIHRDIKPENILVSQSGIT-KLCDFGFARTLAAPGDIYTDYVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVVLPQVQHPKNARKKYPKLNGLLADIVHACLQIDPADRISSSDLLHHEYF 286          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CDKL3_HUMAN (Cyclin-dependent kinase-like 3 OS=Homo sapiens GN=CDKL3 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.138e-23
Identity = 59/186 (31.72%), Postives = 98/186 (52.69%), Query Frame = -1
Query:  230 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG--TPNEKVWPGVSSLMNWHEYPQ-WNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 778
            ++  ++Q+ + + + H + I+HRD+KP N+L+ +  +T K+ D G AR    P   YT  + T WYRAPE++L  T Y   VD+W++ C+  E+ T     P  S+L  L  I   +G  +P+ +     S +      PQ  +P++     P L+    D++   LQ DP+ RIS+   + H YF
Sbjct:  102 LRKYLFQILRAIDYLHSNNIIHRDIKPENILVSQSGIT-KLCDFGFARTLAAPGDIYTDYVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVVLPQVQHPKNARKKYPKLNGLLADIVHACLQIDPADRISSSDLLHHEYF 286          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: PIT1_SCHPO (Sporulation protein kinase pit1 OS=Schizosaccharomyces pombe GN=pit1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.711e-23
Identity = 64/196 (32.65%), Postives = 103/196 (52.55%), Query Frame = -1
Query:  242 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM----DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEK----------VWPGVSSLMN--WHEYPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAME 778
            V+ +M Q+ KG+   H +G  HRD+KP N+L+    D  +  +KIAD GLAR        YT  + T WYRAPE+LL  ++YS  VD+++  C+  E+ T   +FPG+ +  QL  +  +LG+P+E+          +W     L N      P+  P        P  +     +L Q+L++DP+KR +A+  ++
Sbjct:  138 VQDIMRQIFKGLNHIHTNGFFHRDMKPENILISSNSDSSSFNVKIADFGLAREINSR-PPYTEYVSTRWYRAPELLLRDSYYSFPVDIYAAGCMAFEIATLQPIFPGNDDFDQLYKMCEILGSPDEQSQNTGDKGGGIWDRAELLANKLGISLPKMAPLDFGDLFSPPWNLAFASMLSQLLKWDPAKRPTAEMCLD 332          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CDKL3_MOUSE (Cyclin-dependent kinase-like 3 OS=Mus musculus GN=Cdkl3 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.711e-23
Identity = 59/186 (31.72%), Postives = 97/186 (52.15%), Query Frame = -1
Query:  230 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG--TPNEKVWPGVSSLMNWHEYPQ-WNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 778
            ++  ++Q+ + + + H + I+HRD+KP N+L+ +  +T K+ D G AR    P   YT  + T WYRAPE++L  T Y   VD+W++ C+  E+ T     P  S+L  L  I   +G  TP+       S +      PQ  +P++     P L+    D++   LQ DP++R S+   + H YF
Sbjct:  102 LRKYLFQILRAIEYLHNNNIIHRDIKPENILVSQSGIT-KLCDFGFARTLAAPGDVYTDYVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGHPFLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVVLPQVQHPKTARKKYPKLNGLLADIVHACLQIDPAERTSSTDLLRHDYF 286          
The following BLAST results are available for this feature:
BLAST of CN182148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK08_XENLA4.647e-2437.44Mitogen-activated protein kinase 8 OS=Xenopus laev... [more]
MPK16_ORYSJ7.927e-2437.31Mitogen-activated protein kinase 16 OS=Oryza sativ... [more]
MPK11_ORYSJ7.927e-2439.49Mitogen-activated protein kinase 11 OS=Oryza sativ... [more]
CSK2A_SCHPO1.035e-2330.20Casein kinase II subunit alpha OS=Schizosaccharomy... [more]
CDKL3_RAT1.766e-2332.26Cyclin-dependent kinase-like 3 OS=Rattus norvegicu... [more]
JNK_DROME2.306e-2335.35Stress-activated protein kinase JNK OS=Drosophila ... [more]
CDKL3_MACFA5.138e-2331.72Cyclin-dependent kinase-like 3 OS=Macaca fascicula... [more]
CDKL3_HUMAN5.138e-2331.72Cyclin-dependent kinase-like 3 OS=Homo sapiens GN=... [more]
PIT1_SCHPO6.711e-2332.65Sporulation protein kinase pit1 OS=Schizosaccharom... [more]
CDKL3_MOUSE6.711e-2331.72Cyclin-dependent kinase-like 3 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002A09_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182148 ID=CN182148; Name=CN182148; organism=Citrus sinensis; type=EST; length=778bp
GCAATCATTAGTCATAGAATTAGTCACTGAATATTAAATCCAACTTGAGA
GCCACCACAATATCCTAAAAACAAATATTACAAGACTGAAATATGCTTGA
GAGAAGCAAATAGACTCCTCCGCTACAGAAATCCCGTTTGCTGGGTTCTC
CAATCATCACAAACCAAGGATCCTAGTTTCCGTCACTAGTTGACACAGAT
CCTCAGAGTCTTGTCTTGTCCAGATCATCAAAGTATGGGTGTTCCATAGC
TTTCTTTGCTGAGATTCTCTTGGAGGGGTCATATTGCAACATTTGCTCAA
GCAGATCCAGGCCATCCTTGTCCAAATTTGGAACAGCTGTTGCTAGACTT
TGAGGGTTCCATTGCGGGTACTCATGCCAGTTCATTAAACTGCTAACTCC
AGGCCAGACTTTCTCATTGGGAGTGCCTAATAACCTGAAAATATGCAGAA
GCTGTTGGAGTTCAGAATCTCCAGGGAAAAGTGCTGTCTTTGTAACCAGT
TCCGCAAATATACAGGCAACAGACCACATATCAACTGCAGTTGAGTAATG
GGTGGACCCCAAAAGGACTTCCGGAGCCCTATACCAGAGGGTCAATATCT
CATGAGTATATTTCTTAATTGGAAGAGTAAATGCTCGAGCTAAACCAAGA
TCTGCTATCTTAAGTGTCATAGTCTTTCGGTCCATCAACAGATTGTGAGG
CTTAAGGTCCCTATGAAGGATTCCATGTCCATGGCAGAAAGCAACACCCT
TGCAAAGTTGGTACATTAAGCTCTTGAC
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