CN182148

Overview
NameCN182148
Unique NameCN182148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CDK17_RAT (Cell division protein kinase 17 OS=Rattus norvegicus GN=Cdk17 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.931e-50
Identity = 94/188 (50.00%), Postives = 132/188 (70.21%), Query Frame = -1
Query:  221 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY--PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 778
            VK  +YQ+ +G+A+CH   +LHRDLKP NLL++ +   LK+AD GLARA ++P K Y++E++TLWYR P+VLLGS+ YST +DMW V CIF E+ +   LFPG +   +L  IFRLLGTP+++ WPGVSS   +  Y  P++ PQ L    P LD +G++L+ + LQY+  KR  A++AM+H YF  L
Sbjct:  290 VKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG-ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPSQETWPGVSSNDEFKNYNFPKYKPQPLINHAPRLDSEGIELITKFLQYESKKRAPAEEAMKHVYFRSL 476          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CDK5_GLOMM (Cell division protein kinase 5 homolog OS=Glossina morsitans morsitans GN=Cdk5 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.440e-50
Identity = 97/186 (52.15%), Postives = 131/186 (70.43%), Query Frame = -1
Query:  224 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP-QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 775
            +S M QL +G+AFCH H +LHRDLKP NLL++ K   LK+AD GLARAF +P+K Y+ E++TLWYR P+VL G+  Y+T++DMWS  CIFAEL      LFPG   L QL+ IFR+LGTP E+ WPGV+ L ++   P +    S +  VP L   G DLL+++L   P++R+SA++AM+HPYF D
Sbjct:  104 RSFMLQLLRGLAFCHSHNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELADAGRPLFPGSDVLDQLMKIFRVLGTPTEESWPGVTHLSDYVALPHFPAITSWSQIVPRLSSKGRDLLQKLLVCRPNQRVSAEQAMQHPYFTD 288          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CDK5_DROME (Cell division protein kinase 5 homolog OS=Drosophila melanogaster GN=Cdk5 PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 6.440e-50
Identity = 99/186 (53.23%), Postives = 130/186 (69.89%), Query Frame = -1
Query:  224 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP-QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 775
            +S M QL +G+AFCH H +LHRDLKP NLL++ K   LK+AD GLARAF +P+K Y+ E++TLWYR P+VL G+  Y+T++DMWS  CI AEL      LFPG   L QL+ IFR+LGTPNE  WPGVS L ++   P +    S +  VP L+  G DLL+++L   P++RISA+ AM+HPYF D
Sbjct:  104 RSFMLQLLRGLAFCHSHNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAELADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVALPSFPAITSWSQLVPRLNSKGRDLLQKLLICRPNQRISAEAAMQHPYFTD 288          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.098e-49
Identity = 96/195 (49.23%), Postives = 130/195 (66.67%), Query Frame = -1
Query:  230 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS---SLMNWHEYPQWNPQSLAT---------AVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 778
            ++  M  L KGV FCH   +LHRDLKP NLL+ R+   LK+AD GL RAF +P+KKYTHE++TLWYR+P+VLLGST Y T VD+WSV CIFAE+     LF G ++  QLL IFR LGTP+ +VWP ++   +  N    P++    +AT         A   L   G+DLL ++L+Y+P +R++A +A+EHPYF
Sbjct:  104 IQEFMRSLLKGVRFCHERNVLHRDLKPPNLLISREK-ELKLADFGLGRAFGIPVKKYTHEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEMAIGAPLFAGKNDADQLLRIFRFLGTPSSQVWPSMNLYPNSTNMLSKPEFQQNLIATCDEQFQTHPAYAKLGPQGIDLLRRLLRYEPGERLTAAQALEHPYF 297          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CDK18_HUMAN (Cell division protein kinase 18 OS=Homo sapiens GN=CDK18 PE=1 SV=3)

HSP 1 Score: 195.667 bits (496), Expect = 2.447e-49
Identity = 96/188 (51.06%), Postives = 127/188 (67.55%), Query Frame = -1
Query:  221 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY--PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 778
            VK  M+QL +G+A+CH   ILHRDLKP NLL++ +   LK+AD GLARA ++P K Y++E++TLWYR P+VLLGST YST +DMW V CI  E+ T   LFPG +  ++L  IFRLLGTP E+ WPGV++   +  Y  P + PQ L    P LD DG+ LL  +L Y+   R+SA+ A+ H YF  L
Sbjct:  240 VKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERG-ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEMATGRPLFPGSTVKEELHLIFRLLGTPTEETWPGVTAFSEFRTYSFPCYLPQPLINHAPRLDTDGIHLLSSLLLYESKSRMSAEAALSHSYFRSL 426          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CDK16_RAT (Cell division protein kinase 16 OS=Rattus norvegicus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.706e-48
Identity = 91/185 (49.19%), Postives = 129/185 (69.73%), Query Frame = -1
Query:  230 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW--HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 778
            VK  ++QL +G+A+CH   +LHRDLKP NLL++ +   LK+AD GLA A ++P K Y++E++TLWYR P++LLGST YS  +DMW V CIF E+ T   LFPG +  +QL  IFR+LGTP E  WPG+ S   +  + YP++  ++L    P L+ DG DLL ++LQ++   RISA+ AM+HP+F
Sbjct:  263 VKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG-ELKLADFGLAYAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSGQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEDTWPGILSNEEFRTYNYPKYRAEALLRHAPRLECDGADLLTKLLQFEGRNRISAEDAMKHPFF 446          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CDK2_ENTHI (Cell division protein kinase 2 homolog OS=Entamoeba histolytica GN=CDC2 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.534e-48
Identity = 92/188 (48.94%), Postives = 132/188 (70.21%), Query Frame = -1
Query:  215 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW-HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 775
            +S++YQ+ +G+AFCH H ILHRD+KP N+L++ K  T+K+ + GLAR  T+  +KYT E++TLWYRAPE+LLG+T Y  A+D+WS A IF EL+ K  LF G  ++ QL  IF  LGTP E +W GV+ L  +   +P+W  + L T + + D+  +DLL++M  Y P KRISA  A++HP+FD L+K
Sbjct:  103 RSIVYQILQGLAFCHYHQILHRDMKPQNILIN-KNGTIKLGEFGLARLTTINDRKYTSEVVTLWYRAPEILLGATQYGGAIDIWSTAAIFGELINKEELFKGRCKIDQLFKIFSQLGTPTEDIWNGVTKLPFYLSTFPKWKAKDLHT-IFHTDERAVDLLQKMFIYTPEKRISAADALKHPFFDPLNK 288          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CRK1_LEIME (Cell division protein kinase 2 homolog CRK1 OS=Leishmania mexicana GN=CRK1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.615e-48
Identity = 92/197 (46.70%), Postives = 132/197 (67.01%), Query Frame = -1
Query:  230 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY-----------PQWNPQSLATAVPNLDK---DGLDLLEQMLQYDPSKRISAKKAMEHPYF 778
            ++  M  L +GVAFCH   +LHRDLKP NLL+ R+   LK+ D GL R+F +P++K+T+E++TLWYR P+VLLGS  Y   VD+WSV CIF+E+ T T LF G ++  QL+ IFR LGTPN +VWP ++   N +             P+W+  ++  +VP  +K    G+DLLE++L+Y+PS+RI+A  A+ HPYF
Sbjct:  104 IQHFMRDLLRGVAFCHQRSVLHRDLKPQNLLISREK-ELKLGDFGLGRSFAIPVRKFTNEVVTLWYRPPDVLLGSMQYGPPVDVWSVGCIFSEMATGTPLFAGKNDADQLMRIFRFLGTPNNRVWPSMNQYPNSNNMLSQPEFLQNFEPEWS--NVLGSVPGYEKLGCAGVDLLERLLRYEPSERITAADALNHPYF 297          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYBB (Cell division control protein 2 homolog 1 OS=Trypanosoma brucei brucei GN=CRK1 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.754e-47
Identity = 94/195 (48.21%), Postives = 126/195 (64.62%), Query Frame = -1
Query:  230 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSL---MNWHEYPQWNPQSLAT---------AVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 778
            ++  M  L  GV FCH   +LHRDLKP NLL+ R+   LK+AD GL RAF +P+KK+T E++TLWYR+P+VLLGST Y T VD+WSV CIFAE+     LF G ++  QLL IF+ LGTPN +VWP + +     N    P++     AT         A   L   G+DLL  +L+Y+PS+R++A +A+EHPYF
Sbjct:  104 IQEFMRSLLSGVRFCHERNVLHRDLKPPNLLISREK-ELKLADFGLGRAFGIPVKKFTQEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEMAIGAPLFTGKNDADQLLRIFQFLGTPNRQVWPSMDTYPNSSNMLSRPEFQQTLAATCEEQFQTNPAYAKLGPQGIDLLRWLLRYEPSERLTAAQALEHPYF 297          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: PEF1_SCHPO (Serine/threonine-protein kinase pef1 OS=Schizosaccharomyces pombe GN=pef1 PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 8.703e-47
Identity = 91/184 (49.46%), Postives = 126/184 (68.48%), Query Frame = -1
Query:  230 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 778
            VK+   QL KG++FCH + +LHRDLKP NLL++ +   LK+AD GLAR+  +P+  +++E++TLWYRAP+VLLGS  YST++D+WSV CI AE+ T   LF G +   QLL IFRLLGTP E+ WPG+S L  +   +P +  Q LA   P  D  GLDLL +ML+  P  R + + A++H +F
Sbjct:  103 VKNFTQQLLKGISFCHENRVLHRDLKPQNLLINSRG-ELKLADFGLARSIGIPVNTFSNEVVTLWYRAPDVLLGSRVYSTSIDIWSVGCIMAEMATGRPLFAGSNNEDQLLKIFRLLGTPTEQSWPGISLLPEYKPTFPIYKAQDLAYLFPTFDPLGLDLLRRMLRLQPELRTTGQDALQHAWF 285          
The following BLAST results are available for this feature:
BLAST of CN182148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK17_RAT4.931e-5050.00Cell division protein kinase 17 OS=Rattus norvegic... [more]
CDK5_GLOMM6.440e-5052.15Cell division protein kinase 5 homolog OS=Glossina... [more]
CDK5_DROME6.440e-5053.23Cell division protein kinase 5 homolog OS=Drosophi... [more]
CC2H1_TRYCO1.098e-4949.23Cell division control protein 2 homolog 1 OS=Trypa... [more]
CDK18_HUMAN2.447e-4951.06Cell division protein kinase 18 OS=Homo sapiens GN... [more]
CDK16_RAT2.706e-4849.19Cell division protein kinase 16 OS=Rattus norvegic... [more]
CDK2_ENTHI3.534e-4848.94Cell division protein kinase 2 homolog OS=Entamoeb... [more]
CRK1_LEIME4.615e-4846.70Cell division protein kinase 2 homolog CRK1 OS=Lei... [more]
CC2H1_TRYBB1.754e-4748.21Cell division control protein 2 homolog 1 OS=Trypa... [more]
PEF1_SCHPO8.703e-4749.46Serine/threonine-protein kinase pef1 OS=Schizosacc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0002A09_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182148 ID=CN182148; Name=CN182148; organism=Citrus sinensis; type=EST; length=778bp
GCAATCATTAGTCATAGAATTAGTCACTGAATATTAAATCCAACTTGAGA
GCCACCACAATATCCTAAAAACAAATATTACAAGACTGAAATATGCTTGA
GAGAAGCAAATAGACTCCTCCGCTACAGAAATCCCGTTTGCTGGGTTCTC
CAATCATCACAAACCAAGGATCCTAGTTTCCGTCACTAGTTGACACAGAT
CCTCAGAGTCTTGTCTTGTCCAGATCATCAAAGTATGGGTGTTCCATAGC
TTTCTTTGCTGAGATTCTCTTGGAGGGGTCATATTGCAACATTTGCTCAA
GCAGATCCAGGCCATCCTTGTCCAAATTTGGAACAGCTGTTGCTAGACTT
TGAGGGTTCCATTGCGGGTACTCATGCCAGTTCATTAAACTGCTAACTCC
AGGCCAGACTTTCTCATTGGGAGTGCCTAATAACCTGAAAATATGCAGAA
GCTGTTGGAGTTCAGAATCTCCAGGGAAAAGTGCTGTCTTTGTAACCAGT
TCCGCAAATATACAGGCAACAGACCACATATCAACTGCAGTTGAGTAATG
GGTGGACCCCAAAAGGACTTCCGGAGCCCTATACCAGAGGGTCAATATCT
CATGAGTATATTTCTTAATTGGAAGAGTAAATGCTCGAGCTAAACCAAGA
TCTGCTATCTTAAGTGTCATAGTCTTTCGGTCCATCAACAGATTGTGAGG
CTTAAGGTCCCTATGAAGGATTCCATGTCCATGGCAGAAAGCAACACCCT
TGCAAAGTTGGTACATTAAGCTCTTGAC
back to top