CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_NEIG2 (Bifunctional protein folD OS=Neisseria gonorrhoeae (strain NCCP11945) GN=folD PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.823e-34 Identity = 80/164 (48.78%), Postives = 106/164 (64.63%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N+G LA++ PL PCTPKG + LL G++ GK AVV+G SNIVG P +L L ATV++ H+ T+N + ADI++ G+ N V+G W+KPGAVV+DVG +D D S L GDV +E A A++ITPVPGGVGPMT+A L+ NTL +A Sbjct: 127 NVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAAADILVVGVGIPNFVKGGWIKPGAVVIDVGINRLD---DGS------LCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTLHAA 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_NEIG1 (Bifunctional protein folD OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=folD PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.823e-34 Identity = 80/164 (48.78%), Postives = 106/164 (64.63%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N+G LA++ PL PCTPKG + LL G++ GK AVV+G SNIVG P +L L ATV++ H+ T+N + ADI++ G+ N V+G W+KPGAVV+DVG +D D S L GDV +E A A++ITPVPGGVGPMT+A L+ NTL +A Sbjct: 127 NVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAAADILVVGVGIPNFVKGGWIKPGAVVIDVGINRLD---DGS------LCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTLHAA 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_HALHL (Bifunctional protein folD OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=folD PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.823e-34 Identity = 78/165 (47.27%), Postives = 109/165 (66.06%), Query Frame = -1 Query: 157 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 651 N+G LA+R P PCTP+G + LL +G+E+ G++AVV+G+SNIVG P +L L TV++ H+ T+N + +AD+V+A+ G L++G W+ GAVV+DVG +D +L GDV +E A + AS ITPVPGGVGPMTVA LL NTLD+A+ Sbjct: 127 NMGRLALR--LPGLRPCTPRGVMTLLHHTGIELEGRDAVVLGQSNIVGRPMTLELLNARCTVTVCHSRTRNVAERVRQADLVVASVGKPGLIQGDWIGEGAVVIDVGINRLDSG---------KLTGDVDFEAASQRASWITPVPGGVGPMTVATLLENTLDAAR 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BACHD (Bifunctional protein folD OS=Bacillus halodurans GN=folD PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.823e-34 Identity = 77/155 (49.68%), Postives = 100/155 (64.52%), Query Frame = -1 Query: 157 EPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 621 E F+PCTP G + +L + VEI GK+ VV+GRSNIVG P L+ HATV+ H+ TKN +IT +ADI+I A G A + S +K GAVV+DVG VD +L GDV +E +AS +TPVPGGVGPMT+ MLL+NT+ +AK Sbjct: 134 EDTFLPCTPFGVLVMLQEANVEIAGKHVVVVGRSNIVGKPVGQLMLNEHATVTYCHSRTKNLTEITKQADILIVAVGRARFIDASHVKEGAVVIDVGINRVD----------GKLCGDVDFESVREVASHLTPVPGGVGPMTITMLLANTIQAAK 278
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD1_PSESM (Bifunctional protein folD 1 OS=Pseudomonas syringae pv. tomato GN=folD1 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.823e-34 Identity = 82/165 (49.70%), Postives = 104/165 (63.03%), Query Frame = -1 Query: 157 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 651 N+G LA R PL PCTPKG I LL +GV++ G +AVV+G SNIVG P ++ L TV++ H TK+ S AD+V+ AAG LV+G W+KPGA+V+DVG D +L+GDV YE A+ A ITPVPGGVGPMT A LL NTL +A+ Sbjct: 127 NVGRLAQR--IPLLRPCTPKGIIALLESTGVDLYGLDAVVVGASNIVGRPMAMELLLAGCTVTVTHRFTKDLAGHVSRADLVVVAAGKPGLVKGEWIKPGAIVIDVGINRQDDG---------KLVGDVVYETALPRAGWITPVPGGVGPMTRACLLENTLYAAE 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_WIGBR (Bifunctional protein folD OS=Wigglesworthia glossinidia brevipalpis GN=folD PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.299e-34 Identity = 76/161 (47.20%), Postives = 102/161 (63.35%), Query Frame = -1 Query: 169 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 651 NIG L R +P +PCTPKG I LL + ++G NAVV+G SNIVG P SL L TV+I H T N ++ A+++I A G A + GSW+KPGA+V+DVG + +++GDV YE+A+ AS ITPVPGG+GPMT+AML+ NT+ Sbjct: 127 NIGRLCQR--KPTIVPCTPKGIIRLLKYYKINLLGLNAVVVGASNIVGRPMSLELLLEGCTVTITHRFTINLKKYIENAELLIVAIGKAEFIPGSWIKPGAIVIDVGINRLKSG---------KIVGDVNYEDAIEKASYITPVPGGIGPMTIAMLIENTM 276
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_NEIMF (Bifunctional protein folD OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=folD PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.299e-34 Identity = 80/164 (48.78%), Postives = 106/164 (64.63%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N+G LA++ PL PCTPKG + LL G++ GK AVV+G SNIVG P +L L ATV++ H+ T+N + ADI++ G+ N V+G W+KPGAVV+DVG +D D S L GDV +E A A++ITPVPGGVGPMT+A L+ NTL +A Sbjct: 127 NVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAGADILVVGVGIPNFVKGEWIKPGAVVIDVGINRLD---DGS------LCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTLHAA 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_NEIMB (Bifunctional protein folD OS=Neisseria meningitidis serogroup B GN=folD PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.299e-34 Identity = 80/164 (48.78%), Postives = 106/164 (64.63%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N+G LA++ PL PCTPKG + LL G++ GK AVV+G SNIVG P +L L ATV++ H+ T+N + ADI++ G+ N V+G W+KPGAVV+DVG +D D S L GDV +E A A++ITPVPGGVGPMT+A L+ NTL +A Sbjct: 127 NVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLTDEVAGADILVVGVGIPNFVKGEWIKPGAVVIDVGINRLD---DGS------LCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTLHAA 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_NEIMA (Bifunctional protein folD OS=Neisseria meningitidis serogroup A GN=folD PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.299e-34 Identity = 80/164 (48.78%), Postives = 106/164 (64.63%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N+G LA++ PL PCTPKG + LL G++ GK AVV+G SNIVG P +L L ATV++ H+ T+N + ADI++ G+ N V+G W+KPGAVV+DVG +D D S L GDV +E A A++ITPVPGGVGPMT+A L+ NTL +A Sbjct: 127 NVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLTDEVAGADILVVGVGIPNFVKGEWIKPGAVVIDVGINRLD---DGS------LCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTLHAA 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_NEIM0 (Bifunctional protein folD OS=Neisseria meningitidis serogroup C (strain 053442) GN=folD PE=3 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 6.299e-34 Identity = 80/164 (48.78%), Postives = 106/164 (64.63%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N+G LA++ PL PCTPKG + LL G++ GK AVV+G SNIVG P +L L ATV++ H+ T+N + ADI++ G+ N V+G W+KPGAVV+DVG +D D S L GDV +E A A++ITPVPGGVGPMT+A L+ NTL +A Sbjct: 127 NVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAGADILVVGVGIPNFVKGEWIKPGAVVIDVGINRLD---DGS------LCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTLHAA 279 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |