CN182135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A2_YEAST (Eukaryotic translation initiation factor 5A-2 OS=Saccharomyces cerevisiae GN=HYP2 PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.712e-17 Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = -1 Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596 K H V IDIF GKKLED+ PS+HN +VP V R +YQL+DI +DGF+SL+ +G+TKDD++ P Sbjct: 56 KVHLVAIDIFTGKKLEDLSPSTHNMEVPVVKRNEYQLLDI-DDGFLSLMNMDGDTKDDVKAP 116 HSP 2 Score: 29.261 bits (64), Expect = 3.712e-17 Identity = 12/29 (41.38%), Postives = 20/29 (68.97%), Query Frame = -2 Query: 299 IKDGFESGKDLVVSVQCAMGEEQINALKD 385 ++ F+ GKDL+V++ AMGEE + K+ Sbjct: 124 LQTAFDEGKDLMVTIISAMGEEAAISFKE 152
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A1_YEAST (Eukaryotic translation initiation factor 5A-1 OS=Saccharomyces cerevisiae GN=HYP1 PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 6.276e-17 Identity = 36/62 (58.06%), Postives = 50/62 (80.65%), Query Frame = -1 Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596 K H V +DIF GKKLED+ PS+HN +VP V R++YQL+DI +DG++SL+T +G TKDD++ P Sbjct: 56 KVHLVTLDIFTGKKLEDLSPSTHNLEVPFVKRSEYQLLDI-DDGYLSLMTMDGETKDDVKAP 116 HSP 2 Score: 28.4906 bits (62), Expect = 6.276e-17 Identity = 12/25 (48.00%), Postives = 18/25 (72.00%), Query Frame = -2 Query: 299 FESGKDLVVSVQCAMGEEQINALKD 373 F+ GKDL+V++ AMGEE + K+ Sbjct: 128 FDEGKDLMVTIISAMGEEAAISFKE 152
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A1_CHICK (Eukaryotic translation initiation factor 5A-1 OS=Gallus gallus GN=EIF5A1 PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 1.087e-15 Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = -1 Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596 K H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DGF+SLL ++G ++DLRLP Sbjct: 55 KVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRCDFQLIGI-QDGFLSLLQDSGEVREDLRLP 115
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A1_RAT (Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus GN=Eif5a PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 1.855e-15 Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = -1 Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596 K H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP Sbjct: 55 KVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP 115
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A1_RABIT (Eukaryotic translation initiation factor 5A-1 OS=Oryctolagus cuniculus GN=EIF5A PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.855e-15 Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = -1 Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596 K H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP Sbjct: 55 KVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP 115
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A1_MOUSE (Eukaryotic translation initiation factor 5A-1 OS=Mus musculus GN=Eif5a PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.855e-15 Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = -1 Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596 K H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP Sbjct: 55 KVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP 115
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A1_HUMAN (Eukaryotic translation initiation factor 5A-1 OS=Homo sapiens GN=EIF5A PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.855e-15 Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = -1 Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596 K H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP Sbjct: 55 KVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP 115
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A1_BOVIN (Eukaryotic translation initiation factor 5A-1 OS=Bos taurus GN=EIF5A PE=2 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 1.855e-15 Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = -1 Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596 K H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP Sbjct: 55 KVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP 115
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A_NEUCR (Eukaryotic translation initiation factor 5A OS=Neurospora crassa GN=tif-51 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 2.464e-15 Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = -1 Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596 K H V IDIF GKKLED+ PS+HN DVP+V RTDYQ I ED F+ L+ NG K D+++P Sbjct: 62 KVHLVAIDIFTGKKLEDLCPSTHNMDVPNVKRTDYQFSYIDED-FLVLIDSNGEEKRDVKMP 122 HSP 2 Score: 28.4906 bits (62), Expect = 2.464e-15 Identity = 16/37 (43.24%), Postives = 20/37 (54.05%), Query Frame = -2 Query: 287 LLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 397 L +I+ E GKD V VQ AMGEE +K+ K Sbjct: 126 LAKRIEKLEEEGKDFFVGVQTAMGEEAAIDVKEASNK 162
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5AL_HUMAN (Eukaryotic translation initiation factor 5A-1-like OS=Homo sapiens GN=EIF5AL1 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.132e-15 Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = -1 Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596 K H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G +DLRLP Sbjct: 55 KVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVPEDLRLP 115 The following BLAST results are available for this feature:
BLAST of CN182135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182135 ID=CN182135; Name=CN182135; organism=Citrus sinensis; type=EST; length=596bpback to top |