CN188880

Overview
NameCN188880
Unique NameCN188880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length724
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP52T_CANMA (Cytochrome P450 52D1 OS=Candida maltosa GN=CYP52D1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15
Identity = 53/155 (34.19%), Postives = 74/155 (47.74%), Query Frame = -3
Query:  219 KMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTAV--------KKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYRVKVVK----GHPVSPKLALTMYMKHGLKVNL 647
            K  YLQA L E LRLYPSVP + +   ++   P G  V        KKG  V Y I A    E  + KD   F+PERW  +       A+ +  FNGGPR+CLG+ FA  +  Y    +   Y    ++     +P   ++ LTM +  G+ V +
Sbjct:  345 KCPYLQAILHETLRLYPSVPRNARFSKKNTTLPHGGGVDGMSPILIKKGQPVAYFICATHVDEKFYTKDALIFRPERWCEEPLIKKNLAWSYLPFNGGPRICLGQQFALTEASYVLTRLAQCYTKISLQPNSFEYPPKKQVHLTMSLLDGVHVKI 499          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.031e-15
Identity = 48/133 (36.09%), Postives = 67/133 (50.38%), Query Frame = -3
Query:  303 KMKESSSNSLVFKPEEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTAVKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRY 701
            +++ SS   L    +E +KMDYLQA + EALRL P  P+    V  +DV   G  +  GT+VI   +A+ R    WG D  EF+PER L          +KF  F  G R+C G  F    +    A+I+ R+
Sbjct:  322 EIRSSSRQGLFVTEKEAEKMDYLQAVIKEALRLRPPAPLMVPRVFSEDVTLKGYNIPAGTQVIINAWAIQRDTTTWGIDAEEFRPERHLDSILDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRF 454          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.653e-15
Identity = 45/128 (35.16%), Postives = 69/128 (53.91%), Query Frame = -3
Query:  282 KPEEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTAVKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYRVKVVKG 665
            K +E++ M YL+A + E LRL+PS+P+    ++ +DV   G  +  GT+VI   +A+ R  AIWG D  EFKPER L  G         +  F  G R+C G + A    +   A+++ R+  +V  G
Sbjct:  340 KEKEVENMKYLKAVIKEVLRLHPSLPMILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDTAIWGPDAEEFKPERHLDSGLDYHGKNLNYIPFGSGRRICPGINLALGLAEVTVANLVGRFDWRVEAG 467          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 4.525e-15
Identity = 54/147 (36.73%), Postives = 80/147 (54.42%), Query Frame = -3
Query:  258 SSNSLVFKPEEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTAVKKGTKVIYAIYAMGRMEAIWGKDCREFKPER--WLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRY--RVKVVKGHPVSPKLA 686
            S+++L    +E++KM+YL   + E LRL+PS P+  + +  +DV   G  +  GT VI   +A+ R  AIWG D  E++PER  W   G   ++S  KF  F  G RLC G  F+    K A A+++ R+  R+KV       P LA
Sbjct:  333 STHNLNVTEKEVEKMNYLHCVIKEGLRLHPSGPLLFR-LPSEDVQLKGYDISAGTHVIINAWALQRNPAIWGLDANEYRPERHFWYEFGFQRTDS--KFVPFGAGRRLCPGIGFSLVLSKLALANLVKRFNWRLKVGPVGDDKPDLA 476          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP52Q_CANMA (Cytochrome P450 52C2 OS=Candida maltosa GN=CYP52C2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.910e-15
Identity = 47/127 (37.01%), Postives = 68/127 (53.54%), Query Frame = -3
Query:  303 EEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTA--------VKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRY 659
            E I+  DYL+  L E+LR+ PSVP + +   +D + P G          VKKG +V++ +YA  R E  +G+   EF PERW RD   T   A  F  F+ GPR+CLG+ FA  +  Y    ++  +
Sbjct:  356 ETIQNCDYLRWCLFESLRVNPSVPFNSRTANKDTILPRGGGEDCSHPILVKKGDQVLFPLYASNRQEKYFGRKPEEFIPERW-RDLPKTGGPA--FMPFSTGPRMCLGQQFALIEASYVTIRLVQTF 479          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.910e-15
Identity = 45/145 (31.03%), Postives = 75/145 (51.72%), Query Frame = -3
Query:  225 EEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTAVKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYRVKVVKGHPVSPKLALTMYMKHGLKV 659
            E +  + Y+   L E LRLYP V +D  ++V  D       +  GT+V+     + R ++IWG+D  EF P R++      +++   +  F+ GPR+CLG++FA  Q K   A I+ R++  V   +  +P   LT+  + G  V
Sbjct:  374 ERLNHLKYVSMILYEVLRLYPPV-IDLTKIVHKDTKLGSYTIPAGTQVMLPTVMLHREKSIWGEDAMEFNPMRFVDGVANATKNNVTYLPFSWGPRVCLGQNFALLQAKLGLAMILQRFKFDVAPSYVHAPFTILTVQPQFGSHV 517          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP52P_CANTR (Cytochrome P450 52C1 OS=Candida tropicalis GN=CYP52C1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14
Identity = 47/153 (30.72%), Postives = 75/153 (49.02%), Query Frame = -3
Query:  225 IKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFP--------DGTAVKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYR--VKVVKGHPVSPKLALTMYMKHGLKV 653
            I++ DYLQ  ++E +RL+PSVP + +    D V P        D   V KG +V+++ Y++ R E  +G +  +F PERW    R T     +F  F+ GPR CLG+     +  Y    ++  +       K +P +  +A TM +  G  V
Sbjct:  355 IQRCDYLQWCINETMRLHPSVPFNFRTAANDTVIPRGGGKSCTDPILVHKGEQVLFSFYSVNREEKYFGTNTDKFAPERWSESLRRT-----EFIPFSAGPRACLGQQLPRVEASYVTIRLLQTFHGLHNASKQYPPNRVVAATMRLTDGCNV 502          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP4S3_DROME (Probable cytochrome P450 4s3 OS=Drosophila melanogaster GN=Cyp4s3 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.933e-14
Identity = 50/152 (32.89%), Postives = 79/152 (51.97%), Query Frame = -3
Query:  201 EIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTAVKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYRVKVVKGHPVSPKLALTMYMKHGLKVNLCKRDES 656
            E + M YL+A + E LR+YPSVP   ++V+ED +      V KG  +   IY + R    +  D   F P+R+L + +     A  F AF+ GPR C+G+ FA  ++K + A ++  YR    K H   P   L     +G+++ +  RDE+
Sbjct:  344 EKESMPYLEAVIKETLRIYPSVPFFSRKVLED-LEVGKLTVPKGASISCLIYMLHRDPKNF-PDPERFDPDRFLVNEKQMHPFA--FAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSGNGIRLRILPRDEN 491          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP4AM_HUMAN (Cytochrome P450 4A22 OS=Homo sapiens GN=CYP4A22 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13
Identity = 45/145 (31.03%), Postives = 73/145 (50.34%), Query Frame = -3
Query:  219 IKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTAVKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYRVKVVKGHPVSPKLALTMYMKHGLKVNL 653
            + +M Y    + EALRLYP VP   +E+     FPDG ++ KG  V+ +IY +     +W  +   F P R+      +++ ++ F  F+GG R C+GK FA  Q+K A A  + R+ +         P   L +  K+G+ + L
Sbjct:  366 LDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVW-PNLEVFDPSRFAPG---SAQHSHAFLPFSGGSRNCIGKQFAMNQLKVARALTLLRFELLPDPTRIPIPMARLVLKSKNGIHLRL 506          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP4A4_RABIT (Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CYP4A4 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13
Identity = 46/149 (30.87%), Postives = 75/149 (50.34%), Query Frame = -3
Query:  213 EEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTAVKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYRVKVVKGHPVSPKLALTMYMKHGLKVNLCK 659
            E + +M Y    + EALRLYP VP   +++ +   FPDG ++ KG  +  +IY +     +W ++   F P R+  D  Y S   + F  F+GG R C+GK FA  ++K A A  + R+ +         P   + +  K+G+ + L K
Sbjct:  364 EHLDQMPYTTMCIKEALRLYPPVPSVTRQLSKPVTFPDGRSLPKGVILFLSIYGLHYNPKVW-QNPEVFDPFRFAPDSAYHS---HAFLPFSGGARNCIGKQFAMRELKVAVALTLVRFELLPDPTRIPIPIARVVLKSKNGIHLRLRK 508          
The following BLAST results are available for this feature:
BLAST of CN188880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
CP52T_CANMA1.191e-1534.19Cytochrome P450 52D1 OS=Candida maltosa GN=CYP52D1... [more]
C71AJ_ARATH2.031e-1536.09Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH2.653e-1535.16Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71AR_ARATH4.525e-1536.73Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
CP52Q_CANMA5.910e-1537.01Cytochrome P450 52C2 OS=Candida maltosa GN=CYP52C2... [more]
C72A1_CATRO5.910e-1531.03Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
CP52P_CANTR1.317e-1430.72Cytochrome P450 52C1 OS=Candida tropicalis GN=CYP5... [more]
CP4S3_DROME2.933e-1432.89Probable cytochrome P450 4s3 OS=Drosophila melanog... [more]
CP4AM_HUMAN1.115e-1331.03Cytochrome P450 4A22 OS=Homo sapiens GN=CYP4A22 PE... [more]
CP4A4_RABIT1.115e-1330.87Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P06_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188880 ID=CN188880; Name=CN188880; organism=Citrus sinensis; type=EST; length=724bp
TTTTTTTTTTTTTTTTTATTAAATACAACCCTTTATATTCCCATTTAAAT
TATGTTTCAATCAATTCCATGTATTTCTAACACATATATATTGCAATACC
AATAATAATAATATGGCTAAAAATTATGAAAAGCAAACATATTTTATTGA
CACAAAGTGAGCTCTCAATTTATCATTCACTTGAAGTATTTTTGCAGCTC
AGACTCATCTCGCTTGCATAGGTTCACCTTCAAGCCATGCTTCATGTACA
TTGTCAACGCAAGCTTTGGTGACACCGGATGACCCTTCACCACCTTAACA
CGGTAGCGGTAAATGATGGAGGCGGCAGCGTATTTCATCTGATAGTAGGC
GAAATCTTTGCCGAGGCAGAGCCTGGGGCCACCGTTGAAGGCAGTGAACT
TGTAGGCTGATTCACTCGTATAACGGCCGTCTCTTAGCCATCTTTCTGGC
TTGAATTCTCTACAATCCTTTCCCCATATTGCCTCCATTCTTCCCATTGC
ATAAATTGCATATATCACTTTTGTTCCCTTCTTTACAGCTGTCCCATCTG
GAAATACATCGTCTTCAACCACCTCTTTGTGATCAACAGGCACAGAGGGA
TACAACCTCAAAGCCTCTGATAATGCAGCTTGCAAATAATCCATTTTTTT
AATCTCCTCAGGCTTAAACACCAATGAATTACTGCTACTCTCCTTCATTT
TCCCGTCTTCTCTTTCAGCAATTA
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