CN182025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: HECD2_PONAB (Probable E3 ubiquitin-protein ligase HECTD2 OS=Pongo abelii GN=HECTD2 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.247e-20 Identity = 50/134 (37.31%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 24 ISIFNDKELELLISGLPEIDLDDLRANTEYTGYTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFG 425 + + +E+E+L+ G P++D+ L+ +T+Y GY +++FW+V F + +LL F TG+ +VP+ G L F+I K + LP AHTCFNQL LP Y SK+ L+++L++ I SEGFG Sbjct: 649 LMLLRPEEVEILVCGSPDLDMHALQRSTQYDGYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADL-------NFKISKNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISN-SEGFG 774
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: HECD2_HUMAN (Probable E3 ubiquitin-protein ligase HECTD2 OS=Homo sapiens GN=HECTD2 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.247e-20 Identity = 50/134 (37.31%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 24 ISIFNDKELELLISGLPEIDLDDLRANTEYTGYTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFG 425 + + +E+E+L+ G P++D+ L+ +T+Y GY +++FW+V F + +LL F TG+ +VP+ G L F+I K + LP AHTCFNQL LP Y SK+ L+++L++ I SEGFG Sbjct: 649 LMLLRPEEVEILVCGSPDLDMHALQRSTQYDGYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADL-------NFKISKNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISN-SEGFG 774
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: UPL7_ARATH (E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana GN=UPL7 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.737e-20 Identity = 63/145 (43.45%), Postives = 81/145 (55.86%), Query Frame = 3 Query: 6 LVPRELISIFNDKELELLISG-LPEIDLDDLRANTEYTG-YTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHK---------AYGAP--ERLPSAHTCFNQLDLPEYSSKEQLQERLLLAI 401 L+ + +FN E L+SG +ID+DDLR NT+YTG Y+ +S ++ FWEV K F + LL+FVT S+ PL GFK LQ F IHK A G ERLPSA TC+N L LP Y ++E+LL AI Sbjct: 994 LISPAWLKLFNAHEFNQLLSGGNHDIDVDDLRRNTKYTGGYSDSSRTIKIFWEVMKGFEPSERCLLLKFVTSCSRAPLLGFKYLQ-----PTFIIHKVSCDTSLWAAIGGQDVERLPSASTCYNTLKLPTYKRASTMREKLLYAI 1133
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: YFK7_SCHPO (Probable E3 ubiquitin protein ligase C167.07c OS=Schizosaccharomyces pombe GN=SPAC167.07c PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.800e-19 Identity = 55/137 (40.15%), Postives = 82/137 (59.85%), Query Frame = 3 Query: 24 ISIFNDKELELLISGLP-EIDLDDLRANTEYTG-YTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFGF 428 +++F++ E+++L+ G P ID+DDLR +T Y G Y S + FWEV + F +ED ++FVT ++ P+ GFKAL F I RLP+A TC N L LP YS+K+ L+++LL A+ + GFGF Sbjct: 898 LAMFHESEIQILVGGDPVPIDIDDLRRHTVYAGGYEPNSPTIVLFWEVLREFEEEDKRSFVKFVTSVARPPILGFKALM-----PSFCIRVNGEDETRLPTASTCVNLLKLPMYSTKQTLRDKLLTAV-RSGVGFGF 1028
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: HUL4_ASHGO (Probable E3 ubiquitin-protein ligase HUL4 OS=Ashbya gossypii GN=HUL4 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.800e-19 Identity = 53/136 (38.97%), Postives = 78/136 (57.35%), Query Frame = 3 Query: 30 IFNDKELELLISGLPE--IDLDDLRANTEYTG-YTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFGF 428 +F +ELE L+ G E +D+ LR+ T Y G + S VVQWFWE+ +LL FVTG+ +VP G + F+I + +RLP +HTCFN++ L EY KE L+ +L++A+ E S+G+GF Sbjct: 711 LFGSEELEQLVCGSNEQSLDVSMLRSVTRYQGGFDDNSPVVQWFWEILSEMEYPQQRKLLHFVTGSDRVPATGVTTIP-------FRISRIRSGADRLPLSHTCFNEICLHEYKDKETLRNKLIIALEE-SQGYGF 838
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: UBE3C_HUMAN (Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UBE3C PE=1 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 5.237e-19 Identity = 58/141 (41.13%), Postives = 84/141 (59.57%), Query Frame = 3 Query: 6 LVPRELISIFNDKELELLISGLP-EIDLDDLRANTEYTG-YTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGF 422 +V E + +F+ +E+++LISG I L+DL++ T Y+G Y+A V++ FW V + F E+ +LL+FVT S+ PL GFK L F IH ERLP+A TC N L LPE+ + L+ +LL AI E + GF Sbjct: 946 VVSLEWLRMFDQQEIQVLISGAQVPISLEDLKSFTNYSGGYSADHPVIKVFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELY-----PAFCIHNGGSDLERLPTASTCMNLLKLPEFYDETLLRSKLLYAI-ECAAGF 1080
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: UBE3C_MOUSE (Ubiquitin-protein ligase E3C OS=Mus musculus GN=Ube3c PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 6.840e-19 Identity = 57/141 (40.43%), Postives = 84/141 (59.57%), Query Frame = 3 Query: 6 LVPRELISIFNDKELELLISGLP-EIDLDDLRANTEYTG-YTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGF 422 +V E + +F+ +E+++LISG + L+DL++ T Y+G Y+A V++ FW V + F E+ +LL+FVT S+ PL GFK L F IH ERLP+A TC N L LPE+ + L+ +LL AI E + GF Sbjct: 946 VVSLEWLRMFDQQEIQVLISGAQVPVSLEDLKSFTNYSGGYSADHPVIKIFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELY-----PAFCIHNGGSDLERLPTASTCMNLLKLPEFYDEALLRSKLLYAI-ECAAGF 1080
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: HUL4_YEAST (Probable E3 ubiquitin-protein ligase HUL4 OS=Saccharomyces cerevisiae GN=HUL4 PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.599e-18 Identity = 55/139 (39.57%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 24 ISIFNDKELELLISGLPE---IDLDDLRANTEYTG-YTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFGF 428 I +FN +ELE L+ G E D LR+ T+Y G ++ S V WFWE+ ++++ +LLQFVT + ++P G + P K + ++ + + LP AHTCFN++ L YSSK++L+ +LL AI+E SEG+GF Sbjct: 760 IKLFNSEELERLVCGDEEQTKFDFKSLRSVTKYVGGFSDDSRAVCWFWEIIESWDYPLQKKLLQFVTASDRIPATGISTI-----PFKISLLGSHDSDD-LPLAHTCFNEICLWNYSSKKKLELKLLWAINE-SEGYGF 891
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: HERC2_MOUSE (Probable E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 5.791e-18 Identity = 49/136 (36.03%), Postives = 80/136 (58.82%), Query Frame = 3 Query: 6 LVPRELISIFNDKELELLISGLPEIDLDDLRANTEYTGYTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVP--LEGFKALQGISGPQKFQIHKAYGAPER-LPSAHTCFNQLDLPEYSSKEQLQERLLLAIH 404 +VP L+S+F ELE ++ G P+I L L++ Y G ++++VQWFWEV ++F+ + + L+FV G +++P + F+ + Q+ Y P+ LP ++TCF L LP YS K+ L+E+L AIH Sbjct: 4658 VVPVPLLSLFTGYELETMVCGSPDIPLHLLKSVATYKGIEPSASLVQWFWEVMESFSNTERSLFLRFVWGRTRLPRTIADFRGRDFV-----IQVLDKYNPPDHFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIH 4788
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: HERC4_HUMAN (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.563e-18 Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 3 Query: 18 ELISIFNDKELELLISGLPEIDLDDLRANTEYTG-YTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGF 422 +++ +F EL+ ++ G D +L NTEY G Y A ++ FWEV E + L F+TG+ ++P+ G K+L K I G E LP +HTCFN LDLP+Y+ KE L+ +L+ AI + +EGF Sbjct: 927 KVLLLFQPNELQAMVIGNTNYDWKELEKNTEYKGEYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSL-------KLVIQSTGGGEEYLPVSHTCFNLLDLPKYTEKETLRSKLIQAI-DHNEGF 1054 The following BLAST results are available for this feature:
BLAST of CN182025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182025 ID=CN182025; Name=CN182025; organism=Citrus sinensis; type=EST; length=629bpback to top |