CN182013

Overview
NameCN182013
Unique NameCN182013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length724
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182013 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.830e-56
Identity = 116/239 (48.54%), Postives = 163/239 (68.20%), Query Frame = -1
Query:   41 FNPKKKRLLGWQARVRIIEGIAQGLLYLHRYSRLRIIHRDLKASNILLDSDMNPKISDFGMARISGDDELQGNTKRIAGTYGYMSPEYALEGLYSIKSDVFSFGVLMLETLSSKKNTGVYNSD-SFNLLGYAWGLWKDDRAHELMDPVIKQDEVSLPMLIRYINVALLCVQENAADRPIMSDVISMIENEHLNLPSPKEPAF----------TNSKNVNNSTSQLCSVNDVTVSVINPR 724
            F+P K+  L W  R  II GIA+G+LYLH+ SRL IIHRDLKASNILLD+D+NPKI+DFGMARI G D+ Q NT RI GTYGYM+PEYA+ G +S+KSDV+SFGVL+LE +S +KN+    SD + +LL +AW LW + +A +L+DP+I ++      ++R I++ LLCVQE+ A RP +S V  M+ +  + LP P++P F           +S     + S   S++D +++ + PR
Sbjct:  437 FDPTKQIQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFGESDGAQDLLTHAWRLWTNKKALDLVDPLIAEN-CQNSEVVRCIHIGLLCVQEDPAKRPAISTVFMMLTSNTVTLPVPRQPGFFIQCRAVKDPLDSDQSTTTKSFPASIDDESITDLYPR 674          
BLAST of CN182013 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.830e-56
Identity = 114/238 (47.90%), Postives = 156/238 (65.55%), Query Frame = -1
Query:   41 FNPKKKRLLGWQARVRIIEGIAQGLLYLHRYSRLRIIHRDLKASNILLDSDMNPKISDFGMARISGDDELQGNTKRIAGTYGYMSPEYALEGLYSIKSDVFSFGVLMLETLSSKKNTGVYNSDS--FNLLGYAWGLWKDDRAHELMDPVIKQDEVSLPMLIRYINVALLCVQENAADRPIMSDVISMIENEHLNLPSPKEPAF------TNSKNVNNSTSQ--LCSVNDVTVSVINPR 724
            F+   KR L W  R +II GIA+G+LYLH+ SRL IIHRDLKA NILLD+DMNPK++DFGMARI G D+ + NT+R+ GTYGYM+PEYA+ G +S+KSDV+SFGVL+ E +S  KN+ +Y  D    NL+ Y W LW +    +L+DP    D      + R I++ALLCVQE+  DRP MS ++ M+    + L  PK+P F           V +S  +  LCS++D +++ + PR
Sbjct:  594 FDTTMKRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISGMKNSSLYQMDDSVSNLVTYTWRLWSNGSQLDLVDPSF-GDNYQTHDITRCIHIALLCVQEDVDDRPNMSAIVQMLTTSSIVLAVPKQPGFFFRGRHEQVGEVGSSVDRLALCSIDDASITSVAPR 830          
BLAST of CN182013 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.830e-56
Identity = 118/240 (49.17%), Postives = 159/240 (66.25%), Query Frame = -1
Query:   41 FNPKKKRLLGWQARVRIIEGIAQGLLYLHRYSRLRIIHRDLKASNILLDSDMNPKISDFGMARISGDDELQGNTKRIAGTYGYMSPEYALEGLYSIKSDVFSFGVLMLETLSSKKNTGVYNSDSF--NLLGYAWGLWKDDRAHELMDPVIKQDEVSLPMLIRYINVALLCVQENAADRPIMSDVISMIENEHLNLPSPKEPAF-----TNSK-----NVNNSTSQLCSVNDVTVSVINPR 724
            F+P K+  L W  R  II GI +G+LYLH+ SRL IIHRDLKASNILLD+DMNPKI+DFGMARI G D+   NTK+IAGT GYM PEY  +G +S +SDV+SFGVL+LE +  + N  ++ SD+   NL+ YAW LW++D   EL+DP I ++      + R I++ALLCVQ N  DRP +S +  M+ N    LP P++P F     +N +     ++N S  Q  ++NDVT++   PR
Sbjct:  422 FDPTKQGQLDWTKRYNIIRGITRGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVRQGQFSTRSDVYSFGVLVLEIICGRNNRFIHQSDTTVENLVTYAWRLWRNDSPLELVDPTISEN-CETEEVTRCIHIALLCVQHNPTDRPSLSTINMMLINNSYVLPDPQQPGFFFPIISNQERDGLDSMNRSNPQ--TINDVTITDFEPR 658          
BLAST of CN182013 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 3.122e-56
Identity = 116/239 (48.54%), Postives = 160/239 (66.95%), Query Frame = -1
Query:   41 FNPKKKRLLGWQARVRIIEGIAQGLLYLHRYSRLRIIHRDLKASNILLDSDMNPKISDFGMARISGDDELQGNTKRIAGTYGYMSPEYALEGLYSIKSDVFSFGVLMLETLSSKKNTGVYNSD-SFNLLGYAWGLWKDDRAHELMDPVIKQDEVSLPMLIRYINVALLCVQENAADRPIMSDVISMIENEHLNLPSPKEPAF----------TNSKNVNNSTSQLCSVNDVTVSVINPR 724
            F+P K+  L W  R  II GIA+G+LYLH+ SRL IIHRDLKASNILLD+D+NPKI+DFGMARI G D+ Q NT RI GTYGYM+PEYA+ G +S+KSDV+SFGVL+LE +S +KN+    SD + +LL + W LW +  A +L+DP+I  +      ++R I++ LLCVQE+ A RP +S V  M+ +  + LP P++P F          T+S     + S   S++D  ++ + PR
Sbjct:  439 FDPTKQTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFDESDGAQDLLTHTWRLWTNRTALDLVDPLI-ANNCQNSEVVRCIHIGLLCVQEDPAKRPTISTVFMMLTSNTVTLPVPRQPGFFIQSSPVKDPTDSDQSTTTKSTPASIDDELITDLYPR 676          
BLAST of CN182013 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.078e-56
Identity = 116/229 (50.66%), Postives = 148/229 (64.63%), Query Frame = -1
Query:   68 FNPKKKRLLGWQARVRIIEGIAQGLLYLHRYSRLRIIHRDLKASNILLDSDMNPKISDFGMARISGDDELQGNTKRIAGTYGYMSPEYALEGLYSIKSDVFSFGVLMLETLSSKKNTGVYNSDSFN-LLGYAWGLWKDDRAHELMDPVIKQDEVSLPML------IRYINVALLCVQENAADRPIMSDVISMIENEHLNLPSPKEPAFTNSKN---VNNSTSQLCSVND 724
            F   ++  L W  R  I  G+A+GLLYLH+ SR RIIHRDLK SNILLD +M PKISDFGMARI   DE + NT ++ GTYGYMSPEYA+ G++S KSDVFSFGV++LE +S KKN G YN D  N LL Y W  WK+ RA E++DPVI     S P +      ++ I + LLCVQE A  RP MS V+ M  +E   +P PK P +   ++   ++ S+S  C  N+
Sbjct:  614 FGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRGFYNLDYENDLLSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRPAMSSVVWMFGSEATEIPQPKPPGYCVRRSPYELDPSSSWQCDENE 842          
BLAST of CN182013 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.326e-56
Identity = 110/235 (46.81%), Postives = 157/235 (66.81%), Query Frame = -1
Query:   41 FNPKKKRLLGWQARVRIIEGIAQGLLYLHRYSRLRIIHRDLKASNILLDSDMNPKISDFGMARISGDDELQGNTKRIAGTYGYMSPEYALEGLYSIKSDVFSFGVLMLETLSSKKNTGVYNSDSF--NLLGYAWGLWKDDRAHELMDPVIKQDEVSLPMLIRYINVALLCVQENAADRPIMSDVISMIENEHLNLPSPKEPAFTNSKNVNNS-----TSQLCSVNDVTVSVINPR 724
            F+ + +  L W  R +II GIA+G+LYLH+ SRL IIHRDLKA NILLD+DMNPK++DFGMARI   D+ + +T+R+ GTYGYMSPEYA+ G +S+KSDV+SFGVL+LE +S +KN+ +Y  D+   NL+ Y W LW D    +L+D   + D      +IR I++ALLCVQE+  +RP MS ++ M+    + L  P+ P F    N   +      S LCS++  +++++ PR
Sbjct:  426 FDSRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGRKNSSLYQMDASFGNLVTYTWRLWSDGSPLDLVDSSFR-DSYQRNEIIRCIHIALLCVQEDTENRPTMSAIVQMLTTSSIALAVPQPPGFFFRSNHEQAGPSMDKSSLCSIDAASITILAPR 659          
BLAST of CN182013 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.186e-55
Identity = 114/238 (47.90%), Postives = 156/238 (65.55%), Query Frame = -1
Query:   41 FNPKKKRLLGWQARVRIIEGIAQGLLYLHRYSRLRIIHRDLKASNILLDSDMNPKISDFGMARISGDDELQGNTKRIAGTYGYMSPEYALEGLYSIKSDVFSFGVLMLETLSSKKNTGVYNSDS--FNLLGYAWGLWKDDRAHELMDPVIKQDEVSLPMLIRYINVALLCVQENAADRPIMSDVISMIENEHLNLPSPKEPA-FTNSKN-------VNNSTSQLCSVNDVTVSVINPR 724
            F+P  +  L W  R +II GIA+G+LYLH+ SRL IIHRDLKA NILLD+DMNPK++DFGMARI G D+ + NT+R+ GTYGYM+PEYA+ G +S+KSDV+SFGVL+LE +S  KN+ +   D    NL+ Y W LW +    EL+DP    D      + R I++ALLCVQE+A DRP MS ++ M+    + L  P+ P  F  SK         +  TS L S+++ +++ + PR
Sbjct:  430 FDPTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLVTYTWRLWSNGSPSELVDPSF-GDNYQTSEITRCIHIALLCVQEDANDRPTMSAIVQMLTTSSIALAVPRPPGFFLRSKQEQAERACPSMDTSDLFSIDEASITSVAPR 666          
BLAST of CN182013 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.186e-55
Identity = 120/241 (49.79%), Postives = 159/241 (65.98%), Query Frame = -1
Query:   41 FNPKKKRLLGWQARVRIIEGIAQGLLYLHRYSRLRIIHRDLKASNILLDSDMNPKISDFGMARISGDDELQGNTKRIAGTYGYMSPEYALEGLYSIKSDVFSFGVLMLETLSSKKNTGVYNSD--SFNLLGYAWGLWKDDRAHELMDPVIKQDEVSLPMLIRYINVALLCVQENAADRPIMSDVISMIENEHLNLPSPKEP-----------AFTNSKNVNNSTSQLCSVNDVTVSVINPR 724
            F+P K+  L W  R  II GI +G+LYLH+ SRL IIHRDLKASNILLD+DM PKI+DFGMARISG D+   NTKRIAGT+GYM PEY + G +S+KSDV+SFGVL+LE +  KKN   Y +D  + NL+ Y W LW +    EL+D  I ++      +IR I++ALLCVQE+  DRP +S ++ M+ N  L L  P+ P           +F +S+     TSQ  + NDVT++ ++PR
Sbjct:  453 FDPTKQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKKNRSFYQADTKAENLVTYVWRLWTNGSPLELVDLTISEN-CQTEEVIRCIHIALLCVQEDPKDRPNLSTIMMMLTNSSLILSVPQPPGFFVPQNKERDSFLSSQFTMGCTSQ--TKNDVTITNLDPR 690          
BLAST of CN182013 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.004e-54
Identity = 117/239 (48.95%), Postives = 161/239 (67.36%), Query Frame = -1
Query:   41 FNPKKKRLLGWQARVRIIEGIAQGLLYLHRYSRLRIIHRDLKASNILLDSDMNPKISDFGMARISGDDELQGN--TKRIAGTYGYMSPEYALEGLYSIKSDVFSFGVLMLETLSSK-KNTGVYNSD--SFNLLGYAWGLWKDDRAHELMDPVIKQDEVSLPMLIRYINVALLCVQENAADRPIMSDVISMIENEHLNLPSPKEPAFT-----NSKNVNNSTSQ-LCSVNDVTVSVINPR 724
            F+ KK++LL W  R ++I G+A+GLLYLH  SR RIIHRDLKASNILLD +MNPKI+DFG+A++   D+   +  T +IAGTYGYM+PEYA+ G +S+K+DVFSFGVL++E ++ K  N G  N D  + NLL + W  W++D    ++DP +     S   ++R I++ LLCVQE+ A RP M  V  M+ +    LP+P  PAF       S NV++ST   L S+NDVTVS ++PR
Sbjct:  447 FDLKKRQLLDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGKGNNNGRSNDDEEAENLLSWVWRCWREDIILSVIDPSLTTG--SRSEILRCIHIGLLCVQESPASRPTMDSVALMLNSYSYTLPTPSRPAFALESVMPSMNVSSSTEPLLMSLNDVTVSELSPR 683          
BLAST of CN182013 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.510e-54
Identity = 118/239 (49.37%), Postives = 160/239 (66.95%), Query Frame = -1
Query:   41 FNPKKKRLLGWQARVRIIEGIAQGLLYLHRYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI--SGDDELQGNTKRIAGTYGYMSPEYALEGLYSIKSDVFSFGVLMLETLSSKK-NTGVYN--SDSFNLLGYAWGLWKDDRAHELMDPVIKQDEVSLPMLIRYINVALLCVQENAADRPIMSDVISMIENEHLNLPSPKEPAFTNS-----KNVNNSTSQL-CSVNDVTVSVINPR 724
            F+ +K++LL W  R ++I GIA+GLLYLH  SR RIIHRDLKASNILLD +MNPKI+DFG+A++  SG       T RIAGTYGYM+PEYA+ G +S+K+DVFSFGVL++E ++ K+ N G  N   D+ +LL + W  W++D    ++DP +     S   ++R I++ LLCVQE+AA RP M+ V  M+ +    LP+P  PAF         NV++ST  L  S NDVTVS  +PR
Sbjct:  443 FDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSLTAG--SRNEILRCIHIGLLCVQESAATRPTMATVSLMLNSYSFTLPTPLRPAFVLESVVIPSNVSSSTEGLQMSSNDVTVSEFSPR 679          
The following BLAST results are available for this feature:
BLAST of CN182013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 350
Match NameE-valueIdentityDescription
CRK6_ARATH1.830e-5648.54Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK23_ARATH1.830e-5647.90Putative cysteine-rich receptor-like protein kinas... [more]
CRK14_ARATH1.830e-5649.17Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
CRK8_ARATH3.122e-5648.54Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
SRK6_BRAOE4.078e-5650.66Putative serine/threonine-protein kinase receptor ... [more]
CRK5_ARATH5.326e-5646.81Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK20_ARATH1.186e-5547.90Putative cysteine-rich receptor-like protein kinas... [more]
CRK12_ARATH1.186e-5549.79Putative cysteine-rich receptor-like protein kinas... [more]
CRK28_ARATH1.004e-5448.95Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK29_ARATH6.510e-5449.37Cysteine-rich receptor-like protein kinase 29 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N04_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182013 ID=CN182013; Name=CN182013; organism=Citrus sinensis; type=EST; length=724bp
CCCTTAGAGCAAATATGGATGCCGCCCAGATAGATGACTATCGAGGATTG
ATCACTGAAACGGTTACATCATTCACGGAACACAATTGGGACGTTGAATT
ATTCACGTTTTTACTGTTTGTAAAAGCAGGTTCTTTGGGAGAAGGTAAAT
TAAGATGCTCATTCTCAATCATCGAGATAACATCCGACATGATTGGTCTA
TCAGCTGCATTCTCTTGAACGCAGAGAAGAGCCACGTTTATGTATCTAAT
CAGCATTGGCAATGATACTTCATCTTGCTTTATTACTGGATCCATCAATT
CATGAGCTCTGTCATCTTTCCATAGACCCCAAGCATATCCAAGAAGGTTA
AAGGAATCACTATTGTAGACGCCAGTGTTCTTCTTGCTACTCAATGTTTC
CAACATTAATACTCCAAAGCTAAACACATCTGATTTAATGGAGTACAGGC
CTTCTAGGGCATACTCAGGTGACATGTAACCATAAGTTCCAGCAATCCGT
TTAGTATTTCCCTGCAACTCATCATCACCAGATATTCTTGCCATGCCAAA
ATCTGATATTTTGGGGTTCATGTCACTATCTAAGAGAATATTACTTGCCT
TAAGATCTCTGTGAATAATTCTCAGTCTAGAATACCGATGAAGATATAAT
AGTCCTTGGGCAATTCCTTCAATAATTCTAACACGTGCTTGCCAACCTAG
CAGGCGCTTTTTCTTTGGATTGAA
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