CN181983

Overview
NameCN181983
Unique NameCN181983
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.229e-37
Identity = 88/191 (46.07%), Postives = 121/191 (63.35%), Query Frame = 1
Query:   10 NKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIE-EFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQL-LDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            N LG+GGFG VYKG+LA+G  +AVKRL     QG E +F+ EV +I+   HRNL++L G C+   E++L+Y +M N S+   + +    Q  LDW KR  I LG ARG+ YLH     +IIHRD+KA+NILLDEE    +  FG A++   ++    T  V GT G+++PEY   G  S K+DVF +GV+L
Sbjct:  293 NILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVML 482          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 1.605e-37
Identity = 81/192 (42.19%), Postives = 118/192 (61.46%), Query Frame = 1
Query:    7 SNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARV--FGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            S  LGQGG G VYKG L +   +A+K+        +E+F NEVL+++++ HRN+VKLLGCCLE +  +L+YEF+ N +L   +        L W+ R  I + +A  + YLH  + + IIHRD+K +NILLD  +  +++ FG +R+     EE+ T    V GT GY+ PEY   GL + KSDV+ FGV+L
Sbjct:  412 SRILGQGGQGTVYKGILPDNSIVAIKKARLGDSSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELET---MVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVL 600          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.096e-37
Identity = 81/196 (41.33%), Postives = 125/196 (63.78%), Query Frame = 1
Query:    1 EASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSL-DYF---IFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            + S  LGQGG G VYKG L +   +A+K+      + +++F +EVL+++++ HRN+VK+LGCCLE +  +L+YEF+ N +L D+    IFD S    L W+ R  I + +A  + YLH  + + IIHRD+K +NILLDE +  +++ FG +++   ++    T  V GT GY+ PEY   GL + KSDV+ FGV+L
Sbjct:  416 DESRILGQGGQGTVYKGILPDNTIVAIKKARLADSRQVDQFIHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFITNGTLFDHLHGSIFDSS----LTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDK-EQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVL 606          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.738e-37
Identity = 82/191 (42.93%), Postives = 122/191 (63.87%), Query Frame = 1
Query:   19 GQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIF-----DESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            G GGFG VY G++  G ++A+KR S +S QGI EF+ E+ +++KL+HR+LV L+G C E  E +L+YE+M N  L   ++     D +    L WK+R +I +G ARG+ YLH  +   IIHRD+K +NILLDE +  ++S FG ++    +E   +T  V G++GY+ PEY      + KSDV+ FGV+L
Sbjct:  532 GVGGFGKVYIGEIDGGTQVAIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVST-AVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVL 721          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 2.738e-37
Identity = 87/191 (45.55%), Postives = 120/191 (62.83%), Query Frame = 1
Query:   10 NKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIE-EFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESR-KQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            N LG+GGFG VYKG+LA+G  +AVKRL     +G E +F+ EV +I+   HRNL++L G C+   E++L+Y +M N S+   + +       LDW KR  I LG ARG+ YLH     +IIHRD+KA+NILLDEE    +  FG A++    + S  T  V GT G+++PEY   G  S K+DVF +GV+L
Sbjct:  298 NVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYND-SHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVML 487          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 2.738e-37
Identity = 86/198 (43.43%), Postives = 121/198 (61.11%), Query Frame = 1
Query:   16 LGQGGFGPVYKG----------KLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDE-SRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            LG+GGFG V+KG          K   G  IAVK+L+    QG +E+  EV  + +  H NLVKL+G CLE + ++L+YEFMP  SL+  +F   S  Q L W  R  + LG A+G+ +LH ++   +I+RD K SNILLD E N ++S FG A+     + S  + R++GTYGY +PEY   G  +TKSDV+ +GV+L
Sbjct:   75 LGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLH-NAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVL 271          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.576e-37
Identity = 79/188 (42.02%), Postives = 120/188 (63.83%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSL-DYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +G+G FG VY+GKL +G+++AVK     +  G + F NEV L+++++H+NLV   G C E   ++L+YE++   SL D+     S++  L+W  R  + +  A+G+ YLH  S  RIIHRD+K+SNILLD++MN ++S FG ++ F   + S  T  V GT GY+ PEY      + KSDV+ FGV+L
Sbjct:  612 IGRGSFGAVYRGKLPDGKQVAVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVL 799          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.670e-37
Identity = 79/190 (41.58%), Postives = 118/190 (62.11%), Query Frame = 1
Query:    7 SNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            S  LGQGG G VYKG L +   +A+K+        +E+F NEVL+++++ HRN+VKLLGCCLE +  +L+YEF+ + +L   +        L W+ R  I + +A  + YLH  + + IIHRD+K +NILLDE +  +++ FG +R+   ++    T  V GT GY+ PEY   GL + KSDV+ FGV+L
Sbjct:  411 SRILGQGGQGTVYKGILQDNSIVAIKKARLGDRSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRIAIEVAGTLAYLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQ-EQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVL 599          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.670e-37
Identity = 83/197 (42.13%), Postives = 124/197 (62.94%), Query Frame = 1
Query:   16 LGQGGFGPVYKG----------KLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            LG+GGFG V+KG          K  +G  +AVK+L T   QG +E+  EV  + +L H NLVKL+G C+E + ++L+YEFMP  SL+  +F     Q L W  R  + +G A+G+ +LH D++ ++I+RD KA+NILLD E N ++S FG A+     + +  + +V+GT+GY +PEY   G  + KSDV+ FGV+L
Sbjct:   89 LGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGA-QPLTWAIRMKVAIGAAKGLTFLH-DAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVL 283          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.100e-37
Identity = 79/189 (41.80%), Postives = 119/189 (62.96%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARV--FGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            LGQGG G VYKG L +   +A+K+        +E+F NEVL+++++ HRN+VKLLGCCLE +  +L+YEF+ + +L   +        L W+ R  + + IA  + YLH  + + IIHRD+K +NILLDE +  +++ FG +R+     E+++T    V GT GY+ PEY   GL + KSDV+ FGV+L
Sbjct:  416 LGQGGQGTVYKGILPDNSIVAIKKARLGDNSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLAT---MVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVL 601          
The following BLAST results are available for this feature:
BLAST of CN181983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BAK1_ARATH1.229e-3746.07BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
WAK1_ARATH1.605e-3742.19Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
WAK3_ARATH2.096e-3741.33Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
Y5613_ARATH2.738e-3742.93Probable receptor-like protein kinase At5g61350 OS... [more]
SERK4_ARATH2.738e-3745.55Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
APK1B_ARATH2.738e-3743.43Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y5487_ARATH3.576e-3742.02Probable LRR receptor-like serine/threonine-protei... [more]
WAK5_ARATH4.670e-3741.58Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
APK2B_ARATH4.670e-3742.13Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
WAK4_ARATH6.100e-3741.80Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001M07_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181983 ID=CN181983; Name=CN181983; organism=Citrus sinensis; type=EST; length=578bp
GAGGCTTCTAATAAGCTTGGACAAGGGGGATTTGGTCCAGTTTACAAGGG
TAAGCTAGCGAATGGACAGGAGATAGCTGTCAAAAGGTTATCAACAACAT
CAGGACAAGGAATTGAGGAATTCAAAAATGAGGTCTTATTGATAGCAAAA
CTTCAACACAGAAATCTTGTAAAGCTCTTGGGTTGTTGTTTGGAAAAAGA
TGAAAAGATGTTAATCTATGAGTTCATGCCTAACAAAAGCTTGGACTACT
TTATTTTTGATGAATCAAGGAAGCAATTGTTGGATTGGAAAAAGCGCTTC
GATATAATTTTAGGGATAGCTCGAGGGGTCCTATATCTACATCAAGATTC
GAGGTTAAGAATTATCCATCGAGACTTGAAAGCTAGTAATATTCTTCTAG
ATGAAGAGATGAACCCTAGAATCTCACATTTTGGTACAGCTAGAGTATTT
GGAGGAGAGGAGATATCAACAAATACAAATAGGGTGGTTGGAACGTATGG
CTATATGTCACCAGAGTATGCACTGGGTGGCCTATTCTCTACGAAATCAG
ATGTCTTTCAGTTTGGAGTCCTATTATT
back to top