CN181983

Overview
NameCN181983
Unique NameCN181983
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.164e-36
Identity = 83/194 (42.78%), Postives = 121/194 (62.37%), Query Frame = 1
Query:   10 NKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCL-----EKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            N +G+GG+G V+KG L +G ++A KR    S  G   F +EV +IA ++H NL+ L G C      E  +++++ + + N SL   +F +   QL  W  R  I LG+ARG+ YLH  ++  IIHRD+KASNILLDE    +++ FG A+ F  E ++  + RV GT GY++PEYAL G  + KSDV+ FGV+L
Sbjct:  287 NIIGRGGYGNVFKGALPDGTQVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLA-WPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAK-FNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVL 478          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.164e-36
Identity = 79/194 (40.72%), Postives = 129/194 (66.49%), Query Frame = 1
Query:    1 EASNKLGQGGFGPVYKGKLANGQ-EIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVV-GTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            + S  LG GGFG VY+G++  G  ++A+KR +  S QG+ EF+ E+ +++KL+HR+LV L+G C E  E +L+Y++M + ++   ++ +++   L WK+R +I +G ARG+ YLH  ++  IIHRD+K +NILLDE+   ++S FG ++  G     T+ + VV G++GY+ PEY      + KSDV+ FGV+L
Sbjct:  537 DESRVLGVGGFGKVYRGEIDGGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLY-KTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKT-GPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVL 728          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.744e-36
Identity = 79/193 (40.93%), Postives = 124/193 (64.25%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAK-----LQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVF--GGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVL 573
            +G+GG+G VY+G L +G+E+AVK+L     +  +EF+ E+ +++        H NLV+L G CL+  EK+L++E+M   SL+  I D+++   L WKKR DI   +ARG+++LH +    I+HRD+KASN+LLD+  N R++ FG AR+   G   +ST    + GT GY++PEY      +T+ DV+ +GVL
Sbjct:  820 VGRGGYGTVYRGVLPDGREVAVKKLQREGTEAEKEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLEELITDKTK---LQWKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVST---VIAGTIGYVAPEYGQTWQATTRGDVYSYGVL 1006          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 6.744e-36
Identity = 83/195 (42.56%), Postives = 120/195 (61.54%), Query Frame = 1
Query:    7 SNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIF-----DESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            SN LG GGFG V+KG L +G  +AVKR    + + I +  NEV ++ ++ H+NLVKLLGCC+E +  +L+YEF+PN +L   I+            L  ++R  I    A+G+ YLH  S   I HRD+K+SNILLDE ++ +++ FG +R+ G  ++S  T    GT GY+ PEY L    + KSDV+ FGV+L
Sbjct:  357 SNLLGFGGFGEVFKGNLDDGTTVAVKRAKLGNEKSIYQIVNEVQILCQVSHKNLVKLLGCCIELEMPVLVYEFVPNGTLFEHIYGGGGGGGGLYDHLPLRRRLMIAHQTAQGLDYLHSSSSPPIYHRDVKSSNILLDENLDVKVADFGLSRL-GVSDVSHVTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVL 550          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 8.808e-36
Identity = 85/191 (44.50%), Postives = 119/191 (62.30%), Query Frame = 1
Query:   10 NKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIE-EFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQL-LDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            N LG+GGFG VYKG+LA+G  +AVKRL      G E +F+ EV +I+   HRNL++L G C+   E++L+Y +M N S+   + +    Q  LDW  R  I LG ARG+ YLH     +IIHRD+KA+NILLDEE    +  FG A++   ++    T  V GT G+++PEY   G  S K+DVF +G++L
Sbjct:  306 NILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIML 495          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.808e-36
Identity = 78/198 (39.39%), Postives = 123/198 (62.12%), Query Frame = 1
Query:   10 NKLGQGGFGPVYKGKLANGQEIAVKRL--STTSGQGIEEFKN-------EVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            N +G+G  G VY+  + NG+ IAVK+L  +  +G   E+ KN       EV  +  ++H+N+V+ LGCC  ++ ++L+Y++MPN SL   +  E R   LDW  R+ I+LG A+G+ YLH D    I+HRD+KA+NIL+  +  P I+ FG A++    +I   +N V G+YGY++PEY      + KSDV+ +GV++
Sbjct:  790 NVIGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLH-ERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVV 986          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.808e-36
Identity = 74/199 (37.19%), Postives = 120/199 (60.30%), Query Frame = 1
Query:   10 NKLGQGGFGPVYKGKLANGQEIAVKRL---------STTSGQGIEE-FKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            N +G+G  G VYK ++ N + IAVK+L           T   G+ + F  EV  +  ++H+N+V+ LGCC  K+ ++L+Y++M N SL   + + S    L W+ R+ IILG A+G+ YLH D    I+HRD+KA+NIL+  +  P I  FG A++    + + ++N + G+YGY++PEY      + KSDV+ +GV++
Sbjct:  789 NVIGKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVV 987          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.150e-35
Identity = 81/191 (42.41%), Postives = 122/191 (63.87%), Query Frame = 1
Query:   10 NKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEE-FKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFD-ESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            N LGQGGFG VYKG L +  ++AVKRL+     G +  F+ EV +I+   HRNL++L+G C  + E++L+Y FM N SL + + + ++   +LDW+ R  I LG ARG  YLH+    +IIHRD+KA+N+LLDE+    +  FG A++      +  T +V GT G+++PEY   G  S ++DVF +G++L
Sbjct:  294 NVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIML 483          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.150e-35
Identity = 87/198 (43.94%), Postives = 120/198 (60.61%), Query Frame = 1
Query:   16 LGQGGFGPVYKG----------KLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESR-KQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +G+GGFG V+KG          K   G  IAVKRL+    QG  E+  E+  + +L H NLVKL+G CLE++ ++L+YEFM   SL+  +F      Q L W  R  + LG ARG+ +LH +++ ++I+RD KASNILLD   N ++S FG AR     + S  + RV+GT GY +PEY   G  S KSDV+ FGV+L
Sbjct:   74 VGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLH-NAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVL 270          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.502e-35
Identity = 79/187 (42.25%), Postives = 114/187 (60.96%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +G+GGFG VY G L + +++AVK LS +S QG +EFK EV L+ ++ H NLV L+G C E+    LIYE+M N  L   +  +    +L W+ R  I +  A G+ YLH   +  ++HRD+K+ NILLDE    +++ FG +R F   E S  +  VVGT GY+ PEY      + KSDV+ FG++L
Sbjct:  579 IGEGGFGVVYHGYLNDSEQVAVKVLSPSSSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGKHGDCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVL 765          
The following BLAST results are available for this feature:
BLAST of CN181983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RKF3_ARATH5.164e-3642.78Probable LRR receptor-like serine/threonine-protei... [more]
FERON_ARATH5.164e-3640.72Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
Y1743_ARATH6.744e-3640.93Probable LRR receptor-like serine/threonine-protei... [more]
WAKLP_ARATH6.744e-3642.56Wall-associated receptor kinase-like 15 OS=Arabido... [more]
SERK1_ARATH8.808e-3644.50Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
RCH2_ARATH8.808e-3639.39Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
RCH1_ARATH8.808e-3637.19LRR receptor-like serine/threonine-protein kinase ... [more]
Y5129_ARATH1.150e-3542.41Probable LRR receptor-like serine/threonine-protei... [more]
NAK_ARATH1.150e-3543.94Probable serine/threonine-protein kinase NAK OS=Ar... [more]
Y5169_ARATH1.502e-3542.25Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M07_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181983 ID=CN181983; Name=CN181983; organism=Citrus sinensis; type=EST; length=578bp
GAGGCTTCTAATAAGCTTGGACAAGGGGGATTTGGTCCAGTTTACAAGGG
TAAGCTAGCGAATGGACAGGAGATAGCTGTCAAAAGGTTATCAACAACAT
CAGGACAAGGAATTGAGGAATTCAAAAATGAGGTCTTATTGATAGCAAAA
CTTCAACACAGAAATCTTGTAAAGCTCTTGGGTTGTTGTTTGGAAAAAGA
TGAAAAGATGTTAATCTATGAGTTCATGCCTAACAAAAGCTTGGACTACT
TTATTTTTGATGAATCAAGGAAGCAATTGTTGGATTGGAAAAAGCGCTTC
GATATAATTTTAGGGATAGCTCGAGGGGTCCTATATCTACATCAAGATTC
GAGGTTAAGAATTATCCATCGAGACTTGAAAGCTAGTAATATTCTTCTAG
ATGAAGAGATGAACCCTAGAATCTCACATTTTGGTACAGCTAGAGTATTT
GGAGGAGAGGAGATATCAACAAATACAAATAGGGTGGTTGGAACGTATGG
CTATATGTCACCAGAGTATGCACTGGGTGGCCTATTCTCTACGAAATCAG
ATGTCTTTCAGTTTGGAGTCCTATTATT
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