CN181983

Overview
NameCN181983
Unique NameCN181983
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 4.822e-42
Identity = 86/187 (45.99%), Postives = 121/187 (64.71%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            LGQGG G VYKG L +G+ +AVKR        +EEF NEV+++A++ HRN+VKLLGCCLE +  +L+YEF+PN  L   + DE    ++ W+ R  I + IA  + YLH  +   I HRD+K +NILLDE+   ++S FGT+R    ++    T +V GT+GY+ PEY     F+ KSDV+ FGV+L
Sbjct:  430 LGQGGQGTVYKGMLVDGRIVAVKRSKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHL-TTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVL 615          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.822e-42
Identity = 91/188 (48.40%), Postives = 122/188 (64.89%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSL-DYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +G+GGFG VY+G L +GQE+AVK  S TS QG  EF NE+ L++ +QH NLV LLG C E D+++L+Y FM N SL D    + +++++LDW  R  I LG ARG+ YLH      +IHRD+K+SNILLD  M  +++ FG ++    E  S  +  V GT GY+ PEY      S KSDVF FGV+L
Sbjct:  601 IGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVL 788          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 2.393e-41
Identity = 91/197 (46.19%), Postives = 123/197 (62.44%), Query Frame = 1
Query:   16 LGQGGFGPVYKG----------KLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            LGQGGFG VY+G          ++ +G  +A+KRL++ S QG  E+++EV  +  L HRNLVKLLG C E  E +L+YEFMP  SL+  +F   R     W  R  I++G ARG+ +LH   R  +I+RD KASNILLD   + ++S FG A++   +E S  T R++GTYGY +PEY   G    KSDVF FGV+L
Sbjct:   92 LGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLF--RRNDPFPWDLRIKIVIGAARGLAFLHSLQR-EVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVL 285          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 3.125e-41
Identity = 84/187 (44.92%), Postives = 119/187 (63.64%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            LGQGG G VYK  L +G  +AVKR        +EEF NE++L++++ HRN+VKLLGCCLE +  +L+YE++PN  L   + DE    ++ W+ R  I + IA  + Y+H  +   I HRD+K +NILLDE+   +IS FGT+R    ++    T  V GT+GYM PEY L   ++ KSDV+ FGV+L
Sbjct:  434 LGQGGQGTVYKRMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDEYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHL-TTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVL 619          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.082e-41
Identity = 87/191 (45.55%), Postives = 128/191 (67.02%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQE-IAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIF--DESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVV-GTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +G GGFG VYKG++  G   +AVKRL  TS QG +EF+ E+ +++KL+H +LV L+G C E +E +L+YE+MP+ +L   +F  D++    L WK+R +I +G ARG+ YLH  ++  IIHRD+K +NILLDE    ++S FG +RV       T+ + VV GT+GY+ PEY    + + KSDV+ FGV+L
Sbjct:  524 IGVGGFGSVYKGQIDGGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVL 714          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.082e-41
Identity = 91/195 (46.67%), Postives = 128/195 (65.64%), Query Frame = 1
Query:   10 NKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKD----EKMLIYEFMPNKSLDYFIF--DESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            N +G+GGFG VYKG L +G  IAVK++  +  QG  EF+NEV +I+ L+HRNLV L GC +  D    ++ L+Y++M N +LD  +F   E+ K  L W +R  IIL +A+G+ YLH   +  I HRD+K +NILLD +M  R++ FG A+    E  S  T RV GT+GY++PEYAL G  + KSDV+ FGV++
Sbjct:  299 NFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQ-SREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVI 492          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 5.331e-41
Identity = 88/189 (46.56%), Postives = 122/189 (64.55%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLAN-GQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSL-DYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            LG+GGFG V+KG +    Q +A+K+L     QGI EF  EVL ++   H NLVKL+G C E D+++L+YE+MP  SL D+     S K+ LDW  R  I  G ARG+ YLH      +I+RDLK SNILL E+  P++S FG A+V    + +  + RV+GTYGY +P+YA+ G  + KSD++ FGV+L
Sbjct:  109 LGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVL 297          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 5.331e-41
Identity = 86/190 (45.26%), Postives = 122/190 (64.21%), Query Frame = 1
Query:   10 NKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDES-RKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            N +G GGFG VYK  L   + +AVK+LS    QG  EF  E+  + K++H NLV LLG C   +EK+L+YE+M N SLD+++ +++   ++LDW KR  I +G ARG+ +LH      IIHRD+KASNILLD +  P+++ FG AR+    E   +T  + GT+GY+ PEY      +TK DV+ FGV+L
Sbjct:  921 NIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVST-VIAGTFGYIPPEYGQSARATTKGDVYSFGVIL 1109          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 9.094e-41
Identity = 86/191 (45.03%), Postives = 127/191 (66.49%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQE-IAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIF--DESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVV-GTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +G GGFG VYKG++  G   +AVKRL  TS QG +EF  E+ +++KL+H +LV L+G C + +E +L+YE+MP+ +L   +F  D++    L WK+R +I +G ARG+ YLH  ++  IIHRD+K +NILLDE    ++S FG +RV       T+ + VV GT+GY+ PEY    + + KSDV+ FGV+L
Sbjct:  531 IGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVL 721          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 166.007 bits (419), Expect = 1.188e-40
Identity = 86/193 (44.56%), Postives = 125/193 (64.77%), Query Frame = 1
Query:    1 EASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDES-RKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            + +N +G GGFG VYK  L +G+++A+K+LS   GQ   EF+ EV  +++ QH NLV L G C  K++++LIY +M N SLDY++ + +    LL WK R  I  G A+G+LYLH+     I+HRD+K+SNILLDE  N  ++ FG AR+    E   +T+ +VGT GY+ PEY    + + K DV+ FGV+L
Sbjct:  735 DQANIIGCGGFGMVYKATLPDGKKVAIKKLSGDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTD-LVGTLGYIPPEYGQASVATYKGDVYSFGVVL 926          
The following BLAST results are available for this feature:
BLAST of CN181983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLD_ARATH4.822e-4245.99Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
NORK_PEA4.822e-4248.40Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
CX32_ARATH2.393e-4146.19Probable serine/threonine-protein kinase Cx32, chl... [more]
WAKLC_ARATH3.125e-4144.92Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
Y5900_ARATH4.082e-4145.55Putative receptor-like protein kinase At5g39000 OS... [more]
Y1105_ARATH4.082e-4146.67Probable receptor-like protein kinase At1g11050 OS... [more]
RLCK7_ARATH5.331e-4146.56Probable serine/threonine-protein kinase RLCKVII O... [more]
EXS_ARATH5.331e-4145.26Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y5389_ARATH9.094e-4145.03Probable receptor-like protein kinase At5g38990 OS... [more]
PSKR1_ARATH1.188e-4044.56Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001M07_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181983 ID=CN181983; Name=CN181983; organism=Citrus sinensis; type=EST; length=578bp
GAGGCTTCTAATAAGCTTGGACAAGGGGGATTTGGTCCAGTTTACAAGGG
TAAGCTAGCGAATGGACAGGAGATAGCTGTCAAAAGGTTATCAACAACAT
CAGGACAAGGAATTGAGGAATTCAAAAATGAGGTCTTATTGATAGCAAAA
CTTCAACACAGAAATCTTGTAAAGCTCTTGGGTTGTTGTTTGGAAAAAGA
TGAAAAGATGTTAATCTATGAGTTCATGCCTAACAAAAGCTTGGACTACT
TTATTTTTGATGAATCAAGGAAGCAATTGTTGGATTGGAAAAAGCGCTTC
GATATAATTTTAGGGATAGCTCGAGGGGTCCTATATCTACATCAAGATTC
GAGGTTAAGAATTATCCATCGAGACTTGAAAGCTAGTAATATTCTTCTAG
ATGAAGAGATGAACCCTAGAATCTCACATTTTGGTACAGCTAGAGTATTT
GGAGGAGAGGAGATATCAACAAATACAAATAGGGTGGTTGGAACGTATGG
CTATATGTCACCAGAGTATGCACTGGGTGGCCTATTCTCTACGAAATCAG
ATGTCTTTCAGTTTGGAGTCCTATTATT
back to top