CN181929

Overview
NameCN181929
Unique NameCN181929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length648
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.956e-13
Identity = 41/120 (34.17%), Postives = 65/120 (54.17%), Query Frame = 3
Query:  177 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDV----KKDPEAATN 524
            HR+L  L+++YG V+ L  G   ++V SSP+ A+E++  Q + F +R    +         D+ F  YGE+WR++R I  +   +NK VQ  R   E+E + +VE +    K  P AA N
Sbjct:   48 HRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKIMQLQKTTPTAAVN 167          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.327e-12
Identity = 39/141 (27.66%), Postives = 77/141 (54.61%), Query Frame = 3
Query:  177 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRF 599
            HR+L  L+ +YG ++LL  G   ++V S+ + A++VL T    F SR R+ +F+    K ++M    YGE+WR+M+ +  +   +NK+V+  +   ++E   ++E ++K      N   L + L  +  + + R+   R++
Sbjct:   50 HRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSKPVN---LSKILSSLTNDVICRVALGRKY 187          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.956e-12
Identity = 40/111 (36.04%), Postives = 65/111 (58.56%), Query Frame = 3
Query:  171 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKK 503
            L HR    L+ KYG ++ LR+G   +VV+SS + A+ VL T  +E  SR + V     +   +D+ F  YGE+WR++R++  +  F++K VQ  R+  E+E   VV+ V +
Sbjct:   50 LPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKVSE 160          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.956e-12
Identity = 44/146 (30.14%), Postives = 83/146 (56.85%), Query Frame = 3
Query:  177 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTR-NVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQD 611
            HR+L  L+ +YG ++LL  G+  ++VVSS D A +++ T  ++  +R +  VV  IF G G++MVF+ YGE+WR+++ +  V     K VQ      E+E + ++E V+K   + ++ + L   L  +  +   R+   R++  ++
Sbjct:   54 HRSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANRPQLKVVEKIFNG-GREMVFSPYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEK-ASSDSSPLNLSELLLTLTSDVTSRVSLGRKYSKEE 197          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.860e-12
Identity = 35/109 (32.11%), Postives = 66/109 (60.55%), Query Frame = 3
Query:  177 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKK 503
            HR+L  L+ +YG ++LL  G+  ++VVSS D A +++ T  ++  +R R  V +     G+++VF+ YG++WR+++ +  V     K+VQ      E+E + ++E V+K
Sbjct:   53 HRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEK 161          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.042e-12
Identity = 48/157 (30.57%), Postives = 84/157 (53.50%), Query Frame = 3
Query:  171 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKAL 641
            L H +L  L+ ++G V+L+R G   + V SS + AKEVL T  +E  +R + V   +FT   +D+ FT YGE WR+M++ + +  F+ K  +  R+  E+E   +V+ +    +  T  + LR+ L     + ++R  F + F   D    ++L+ L
Sbjct:   47 LLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTL-VDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEEL 202          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.585e-12
Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = 3
Query:  168 DLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDE 473
            +L+ RN  +L++KYG ++ LR G   +VV+SS + A+EVL T  +E  SR   V     +   +D+ F  YGE WR MR++  V  F++K +Q  R+  E+E
Sbjct:   46 ELHPRNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEE 147          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.585e-12
Identity = 46/144 (31.94%), Postives = 81/144 (56.25%), Query Frame = 3
Query:  171 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFE 602
            L H+ L DL+KK+G VLLLR+G  ++VV+SS + A+E L    +E  +R    V       GQD+    YGE  R++R++  + FF+   V+  R+  E+E   +V+ + K+     + + L + L  ++ + ++R  F +RF+
Sbjct:   45 LFHKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKL-KEAALKKSSVDLSQTLFGLVGSIIFRSAFGQRFD 187          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.585e-12
Identity = 45/161 (27.95%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  147 NWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSR-----TRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 614
            N  Q+G+ L HR+L  LA + G ++LL +G    ++VS+ + A+E+L T  + F SR      R + +D       D+ F+ YGE+WR++R+I  +   + K V   R   E+E   ++E + +        + L   L L+    + R+ F +++E +++
Sbjct:   43 NLHQLGN-LPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDC-----TDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTG-EAVNLSELLLLLSSGTITRVAFGKKYEGEEE 196          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11
Identity = 42/117 (35.90%), Postives = 58/117 (49.57%), Query Frame = 3
Query:  147 NWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDV 497
            N L +     H  L DLA K+G V+ LR+GQ + VV+SSP  A+EVL  +   F SR   +V DI      DM F  YG +WR +R++          V+Q     + E   +V  V
Sbjct:   39 NLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVRKV 155          
The following BLAST results are available for this feature:
BLAST of CN181929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
C71A6_NEPRA5.956e-1334.17Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71AN_ARATH1.327e-1227.66Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH2.956e-1236.04Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71AE_ARATH2.956e-1230.14Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71AF_ARATH3.860e-1232.11Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71BU_ARATH5.042e-1230.57Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71BS_ARATH6.585e-1238.24Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BO_ARATH6.585e-1231.94Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71A1_PERAE6.585e-1227.95Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C99A1_SORBI1.467e-1135.90Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L01_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181929 ID=CN181929; Name=CN181929; organism=Citrus sinensis; type=EST; length=648bp
GGTTAATCGTAAAGATGGATCTCCTCTTGCTGGAAAAGACGCTTTTAGCC
CTCTTCGCCGCCGTTGTTGTCGCCATTACCGTCTCTAAACTCCGCGGAAA
GCGCTTCAAGCTCCCCCCCGGCCCCCTCCCCGTCCCCGTATTCGGCAACT
GGCTCCAGGTCGGCGATGACTTGAACCATCGGAACCTCTCCGACTTAGCC
AAGAAATATGGAGATGTCCTCCTCCTCCGCATGGGCCAGCGCAACCTCGT
CGTCGTCTCGTCGCCGGACCACGCCAAGGAGGTTCTGCACACGCAGGGAG
TGGAGTTCGGATCACGAACGAGGAACGTCGTGTTCGATATCTTCACTGGG
AAGGGCCAGGACATGGTGTTCACAGTGTACGGCGAGCACTGGCGGAAGAT
GCGGAGGATCATGACCGTCCCTTTCTTCACGAACAAAGTGGTTCAGCAGC
AGCGGTTTAATTGGGAAGACGAGGCCGCTAGAGTCGTTGAGGATGTTAAG
AAGGACCCCGAGGCGGCGACCAATGGGATCGTCTTGAGGAGGCGGCTGCA
GCTTATGATGTACAACAACATGTACAGGATTATGTTTGATAGAAGATTCG
AGAGTCAGGATGATCCTTTGTTTAACAGATTAAAGGCTTTGAATGGTG
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