CN181923

Overview
NameCN181923
Unique NameCN181923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length615
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1_SPIPO (Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.063e-57
Identity = 110/116 (94.83%), Postives = 115/116 (99.14%), Query Frame = -2 
Query:  267 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 614
            SKRAMDEYTSEIFMGGK+TI+LHNTCEDSLLAAPI+LDLVLLAELSTRIQLKAEGE KFHSFHPVA+ILSYL+KAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  395 SKRAMDEYTSEIFMGGKSTIILHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGESKFHSFHPVASILSYLSKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 4.596e-57
Identity = 111/116 (95.69%), Postives = 113/116 (97.41%), Query Frame = -2 
Query:  267 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 614
            SKRAMDEYTSEIFMGG NTIV+HNTCEDSLLAAPI+LDLVLLAELSTRIQLKAE E KFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  397 SKRAMDEYTSEIFMGGTNTIVMHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEEEDKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 512
[Close]
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.024e-56
Identity = 109/116 (93.97%), Postives = 113/116 (97.41%), Query Frame = -2 
Query:  267 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 614
            SKRAMDEYTSEIFMGGKNTIV+HNTCEDSLLAAPI+LDLVLLAE+STRIQ K+E EGKFHSFHPVAT LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  395 SKRAMDEYTSEIFMGGKNTIVMHNTCEDSLLAAPIILDLVLLAEISTRIQFKSEKEGKFHSFHPVATKLSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.746e-56
Identity = 109/116 (93.97%), Postives = 113/116 (97.41%), Query Frame = -2 
Query:  267 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 614
            SKRAMDEYTSEIFMGGK+TIVLHNTCEDSLL API+LDLVLLAELSTRIQLKAEGE K HSFHPVATILSYLTKAPLVPPGTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  395 SKRAMDEYTSEIFMGGKSTIVLHNTCEDSLLRAPIILDLVLLAELSTRIQLKAEGEDKLHSFHPVATILSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510
[Close]
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.891e-56
Identity = 106/116 (91.38%), Postives = 113/116 (97.41%), Query Frame = -2 
Query:  267 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 614
            SKRAMDEYTSEIFMGGKNTIV+HNTCEDSLLAAPI+LDLVLLAEL+TRIQ  +E EGKFHSFHPVAT+LSYL+KAPLVPPGTPVVNALSKQRAMLEN+LRACVGLAPENNMILEYK
Sbjct:  395 SKRAMDEYTSEIFMGGKNTIVMHNTCEDSLLAAPIILDLVLLAELTTRIQFMSENEGKFHSFHPVATLLSYLSKAPLVPPGTPVVNALSKQRAMLENVLRACVGLAPENNMILEYK 510
[Close]
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.073e-41
Identity = 80/116 (68.97%), Postives = 100/116 (86.21%), Query Frame = -2 
Query:  267 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 614
            SKRAMDEYTS+IFMGG NTIVLHNTCEDSLLAAPI+LDLV+LAE+++RI +K + + +F +FHPV ++LSYL KAP+VP    VVNAL KQRA +ENI +ACVG+AP+NNM+LE +
Sbjct:  395 SKRAMDEYTSQIFMGGHNTIVLHNTCEDSLLAAPIILDLVILAEVTSRITMKKQDDDQFATFHPVLSLLSYLLKAPIVPKHATVVNALFKQRACIENIFKACVGIAPDNNMLLEQR 510
[Close]
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.754e-40
Identity = 80/116 (68.97%), Postives = 97/116 (83.62%), Query Frame = -2 
Query:  267 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 614
            SKRAMDEYTSEI MGG NTIVLHNTCEDSLLA+PI+LDLVLL EL  RI  + E + +F +FH V +ILS+L KAPLVP GTPV+NA  +QR  +ENILRAC+GL+P+N+M+LE+K
Sbjct:  389 SKRAMDEYTSEIMMGGANTIVLHNTCEDSLLASPIILDLVLLTELCQRITFRTETDQEFQTFHSVLSILSFLCKAPLVPAGTPVINAFFRQRNCIENILRACLGLSPQNHMMLEHK 504
[Close]
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 3.909e-40
Identity = 81/116 (69.83%), Postives = 96/116 (82.76%), Query Frame = -2 
Query:  267 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 614
            SKRAMDEYTSEI MGG NTIVLHNTCEDSLLA+PI LDLVLL EL  RI  + E + +F +FH V +ILS+L KAPLVP GTPVVNA  +QR  +ENILRAC+GL+P+N+M+LE+K
Sbjct:  389 SKRAMDEYTSEIMMGGANTIVLHNTCEDSLLASPIFLDLVLLTELCQRITFRTETDQEFQTFHSVLSILSFLCKAPLVPAGTPVVNAFFRQRNCIENILRACLGLSPQNHMMLEHK 504
[Close]
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 2.533e-39
Identity = 76/116 (65.52%), Postives = 96/116 (82.76%), Query Frame = -2 
Query:  267 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 614
            SKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDLVLL EL  R+    + + +   FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  392 SKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLVLLTELCQRVSFCTDSDPEPQGFHPVLSVLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507
[Close]
BLAST of CN181923 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.644e-39
Identity = 75/116 (64.66%), Postives = 97/116 (83.62%), Query Frame = -2 
Query:  267 SKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 614
            SKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDL LL EL  R+    + + +  +FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENILRAC+GL P+N+M+LE+K
Sbjct:  392 SKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDADPEPQTFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACLGLPPQNHMLLEHK 507
The following BLAST results are available for this feature:
BLAST of CN181923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_SPIPO2.063e-5794.83Inositol-3-phosphate synthase OS=Spirodela polyrrh... [more]
INO1_MESCR4.596e-5795.69Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO1_BRANA1.024e-5693.97Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO1_HORVU1.746e-5693.97Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO3_ARATH3.891e-5691.38Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_DICDI2.073e-4168.97Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1A_XENLA1.754e-4068.97Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1B_XENLA3.909e-4069.83Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1_RAT2.533e-3965.52Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1_MACFA5.644e-3964.66Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001K22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001K22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181923 ID=CN181923; Name=CN181923; organism=Citrus sinensis; type=EST; length=615bp
GAGGAGTTATTTATGAACTTCCATATATTATCTACTTGCAATACAAGAGA
TTTCATGCTCCGAAATGAGCTACAAAGGCAATGGGCTACACTCCAGCACC
TTCATTAAAAAAATAAAAGAGCAAACATACAGGACACACTAATATTAACC
ACAATTTCATGACACAAGACATTACAATCAGTAATTAAATGGACCACCAC
AGCTTTGATTGGTGACAGAGAAAGGGAAAACCGGTTCTTCCACTTTTCTC
CCCTGCAAGTTCTTCACTTGTATTCCAAAATCATGTTGTTCTCAGGAGCC
AAGCCAACGCAAGCCCTCAGAATGTTCTCAAGCATTGCACGCTGCTTCGA
CAGCGCATTCACCACTGGTGTGCCTGGAGGGACCAGAGGAGCCTTGGTGA
GGTAGCTGAGAATTGTAGCCACAGGGTGGAAAGAGTGGAATTTGCCCTCT
CCTTCAGCTTTGAGCTGGATCCTGGTGCTGAGTTCAGCCAGCAGAACCAA
ATCTAGAACGATTGGAGCAGCCAAAAGAGAGTCCTCACACGTGTTGTGCA
GCACAATGGTGTTCTTGCCACCCATGAAAATTTCTGATGTGTACTCATCC
ATGGCTCTCTTGCTA
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